Ggra7633.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7633.t1
Unique NameGgra7633.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length119
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:604554..604910 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7633Ggra7633Gracilaria gracilis GNS1m malegenetig00000866_pilon 604554..604910 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7633.t1.start1Ggra7633.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000866_pilon 604554..604556 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7633.t1.CDS1Ggra7633.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000866_pilon 604554..604910 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7633.t1.exon1Ggra7633.t1.exon1Gracilaria gracilis GNS1m maleexontig00000866_pilon 604554..604910 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7633.t1.stop1Ggra7633.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000866_pilon 604908..604910 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7633.t1Ggra7633.t1Gracilaria gracilis GNS1m malepolypeptidetig00000866_pilon 604554..604910 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7633.t1 ID=Ggra7633.t1|Name=Ggra7633.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=119bp
MLSDILQLHYEIWNSSQPHALGAFTRVLSVLLSSRPKHLFLADTSTPYAE
KIEQDAQLEPQIPKQAVADATDTLQMKQLSNQLSVSMTYTMSTKNVCSLM
HVAVSQGTEAIIEAKRRF*
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spliced messenger RNA

>Ggra7633.t1 ID=Ggra7633.t1|Name=Ggra7633.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=357bp|location=Sequence derived from alignment at tig00000866_pilon:604554..604910+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGTCCGATATCCTACAGCTGCATTATGAAATCTGGAATTCTTCGCA
GCCGCACGCGCTGGGCGCCTTCACGCGCGTGCTCTCTGTGCTCTTGTCGT
CGCGGCCAAAGCACCTCTTTCTAGCCGACACTTCAACACCGTACGCTGAG
AAAATCGAGCAAGACGCCCAGCTTGAGCCCCAAATTCCCAAGCAGGCCGT
CGCCGACGCAACCGACACGCTGCAGATGAAGCAGCTTTCCAACCAATTGA
GCGTTTCCATGACCTACACCATGTCCACGAAAAATGTGTGCTCCTTGATG
CACGTCGCCGTGTCGCAGGGAACGGAGGCTATCATCGAGGCAAAGAGACG
TTTTTGA
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protein sequence of Ggra7633.t1

>Ggra7633.t1 ID=Ggra7633.t1|Name=Ggra7633.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=119bp
MLSDILQLHYEIWNSSQPHALGAFTRVLSVLLSSRPKHLFLADTSTPYAE
KIEQDAQLEPQIPKQAVADATDTLQMKQLSNQLSVSMTYTMSTKNVCSLM
HVAVSQGTEAIIEAKRRF*
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mRNA from alignment at tig00000866_pilon:604554..604910+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7633.t1 ID=Ggra7633.t1|Name=Ggra7633.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=357bp|location=Sequence derived from alignment at tig00000866_pilon:604554..604910+ (Gracilaria gracilis GNS1m male)
ATGCTGTCCGATATCCTACAGCTGCATTATGAAATCTGGAATTCTTCGCA
GCCGCACGCGCTGGGCGCCTTCACGCGCGTGCTCTCTGTGCTCTTGTCGT
CGCGGCCAAAGCACCTCTTTCTAGCCGACACTTCAACACCGTACGCTGAG
AAAATCGAGCAAGACGCCCAGCTTGAGCCCCAAATTCCCAAGCAGGCCGT
CGCCGACGCAACCGACACGCTGCAGATGAAGCAGCTTTCCAACCAATTGA
GCGTTTCCATGACCTACACCATGTCCACGAAAAATGTGTGCTCCTTGATG
CACGTCGCCGTGTCGCAGGGAACGGAGGCTATCATCGAGGCAAAGAGACG
TTTTTGA
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Coding sequence (CDS) from alignment at tig00000866_pilon:604554..604910+

>Ggra7633.t1 ID=Ggra7633.t1|Name=Ggra7633.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=357bp|location=Sequence derived from alignment at tig00000866_pilon:604554..604910+ (Gracilaria gracilis GNS1m male)
ATGCTGTCCGATATCCTACAGCTGCATTATGAAATCTGGAATTCTTCGCA
GCCGCACGCGCTGGGCGCCTTCACGCGCGTGCTCTCTGTGCTCTTGTCGT
CGCGGCCAAAGCACCTCTTTCTAGCCGACACTTCAACACCGTACGCTGAG
AAAATCGAGCAAGACGCCCAGCTTGAGCCCCAAATTCCCAAGCAGGCCGT
CGCCGACGCAACCGACACGCTGCAGATGAAGCAGCTTTCCAACCAATTGA
GCGTTTCCATGACCTACACCATGTCCACGAAAAATGTGTGCTCCTTGATG
CACGTCGCCGTGTCGCAGGGAACGGAGGCTATCATCGAGGCAAAGAGACG
TTTTTGA
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