Ggra7624.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7624.t1
Unique NameGgra7624.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length223
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:437509..438177 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7624Ggra7624Gracilaria gracilis GNS1m malegenetig00000866_pilon 437509..438177 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7624.t1.start1Ggra7624.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000866_pilon 437509..437511 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7624.t1.CDS1Ggra7624.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000866_pilon 437509..438177 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7624.t1.exon1Ggra7624.t1.exon1Gracilaria gracilis GNS1m maleexontig00000866_pilon 437509..438177 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7624.t1.stop1Ggra7624.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000866_pilon 438175..438177 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7624.t1Ggra7624.t1Gracilaria gracilis GNS1m malepolypeptidetig00000866_pilon 437509..438177 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7624.t1 ID=Ggra7624.t1|Name=Ggra7624.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=223bp
MKIAAALVLGFFLECLVTSLSLPQTNANLHSPLRVASNDSCQVNVCFAVD
SNTFRYYVDEISGFVFNTTSALAAINNVKFAAVQYGEVLTQISNLTSNVG
AFERAFLATHLERNILSTASHGIWACTFELGAEVGKLSKIIIMSAGANTV
EGDPVRDAYIFRRLLGEGASVSTVKVGSESVLADAQKLRDIASAGGGQLY
KKDEFLSLSCDILDLVRDQGCL*
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spliced messenger RNA

>Ggra7624.t1 ID=Ggra7624.t1|Name=Ggra7624.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=669bp|location=Sequence derived from alignment at tig00000866_pilon:437509..438177+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGATCGCGGCTGCTCTCGTTCTCGGTTTTTTCTTGGAGTGCTTGGT
CACTTCGCTCTCATTGCCTCAAACAAATGCAAATCTCCACTCTCCATTAA
GAGTGGCGAGCAACGACAGTTGCCAGGTGAATGTGTGCTTCGCGGTTGAC
TCAAATACGTTTCGTTATTATGTTGATGAAATCAGTGGTTTCGTGTTCAA
CACGACGTCCGCTCTAGCTGCGATAAATAACGTCAAATTCGCTGCTGTAC
AGTATGGAGAGGTGCTCACTCAAATCTCAAACCTAACAAGCAATGTAGGT
GCGTTTGAGCGAGCATTCCTAGCAACACATCTGGAGAGGAACATACTAAG
TACCGCCAGTCATGGAATATGGGCGTGCACGTTTGAGTTAGGAGCTGAAG
TTGGCAAACTGTCCAAGATTATTATAATGAGCGCGGGGGCCAACACTGTT
GAAGGCGATCCGGTGCGAGATGCGTACATCTTCAGGCGTTTGCTCGGGGA
GGGGGCCTCTGTTAGTACAGTTAAAGTTGGCTCCGAGTCCGTGTTAGCAG
ATGCTCAGAAACTGCGTGACATTGCAAGCGCTGGTGGGGGTCAACTGTAC
AAGAAGGATGAGTTTCTTTCTCTATCATGTGATATCCTAGACCTTGTGCG
CGACCAGGGCTGCCTCTAA
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protein sequence of Ggra7624.t1

>Ggra7624.t1 ID=Ggra7624.t1|Name=Ggra7624.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=223bp
MKIAAALVLGFFLECLVTSLSLPQTNANLHSPLRVASNDSCQVNVCFAVD
SNTFRYYVDEISGFVFNTTSALAAINNVKFAAVQYGEVLTQISNLTSNVG
AFERAFLATHLERNILSTASHGIWACTFELGAEVGKLSKIIIMSAGANTV
EGDPVRDAYIFRRLLGEGASVSTVKVGSESVLADAQKLRDIASAGGGQLY
KKDEFLSLSCDILDLVRDQGCL*
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mRNA from alignment at tig00000866_pilon:437509..438177+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7624.t1 ID=Ggra7624.t1|Name=Ggra7624.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=669bp|location=Sequence derived from alignment at tig00000866_pilon:437509..438177+ (Gracilaria gracilis GNS1m male)
ATGAAGATCGCGGCTGCTCTCGTTCTCGGTTTTTTCTTGGAGTGCTTGGT
CACTTCGCTCTCATTGCCTCAAACAAATGCAAATCTCCACTCTCCATTAA
GAGTGGCGAGCAACGACAGTTGCCAGGTGAATGTGTGCTTCGCGGTTGAC
TCAAATACGTTTCGTTATTATGTTGATGAAATCAGTGGTTTCGTGTTCAA
CACGACGTCCGCTCTAGCTGCGATAAATAACGTCAAATTCGCTGCTGTAC
AGTATGGAGAGGTGCTCACTCAAATCTCAAACCTAACAAGCAATGTAGGT
GCGTTTGAGCGAGCATTCCTAGCAACACATCTGGAGAGGAACATACTAAG
TACCGCCAGTCATGGAATATGGGCGTGCACGTTTGAGTTAGGAGCTGAAG
TTGGCAAACTGTCCAAGATTATTATAATGAGCGCGGGGGCCAACACTGTT
GAAGGCGATCCGGTGCGAGATGCGTACATCTTCAGGCGTTTGCTCGGGGA
GGGGGCCTCTGTTAGTACAGTTAAAGTTGGCTCCGAGTCCGTGTTAGCAG
ATGCTCAGAAACTGCGTGACATTGCAAGCGCTGGTGGGGGTCAACTGTAC
AAGAAGGATGAGTTTCTTTCTCTATCATGTGATATCCTAGACCTTGTGCG
CGACCAGGGCTGCCTCTAA
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Coding sequence (CDS) from alignment at tig00000866_pilon:437509..438177+

>Ggra7624.t1 ID=Ggra7624.t1|Name=Ggra7624.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=669bp|location=Sequence derived from alignment at tig00000866_pilon:437509..438177+ (Gracilaria gracilis GNS1m male)
ATGAAGATCGCGGCTGCTCTCGTTCTCGGTTTTTTCTTGGAGTGCTTGGT
CACTTCGCTCTCATTGCCTCAAACAAATGCAAATCTCCACTCTCCATTAA
GAGTGGCGAGCAACGACAGTTGCCAGGTGAATGTGTGCTTCGCGGTTGAC
TCAAATACGTTTCGTTATTATGTTGATGAAATCAGTGGTTTCGTGTTCAA
CACGACGTCCGCTCTAGCTGCGATAAATAACGTCAAATTCGCTGCTGTAC
AGTATGGAGAGGTGCTCACTCAAATCTCAAACCTAACAAGCAATGTAGGT
GCGTTTGAGCGAGCATTCCTAGCAACACATCTGGAGAGGAACATACTAAG
TACCGCCAGTCATGGAATATGGGCGTGCACGTTTGAGTTAGGAGCTGAAG
TTGGCAAACTGTCCAAGATTATTATAATGAGCGCGGGGGCCAACACTGTT
GAAGGCGATCCGGTGCGAGATGCGTACATCTTCAGGCGTTTGCTCGGGGA
GGGGGCCTCTGTTAGTACAGTTAAAGTTGGCTCCGAGTCCGTGTTAGCAG
ATGCTCAGAAACTGCGTGACATTGCAAGCGCTGGTGGGGGTCAACTGTAC
AAGAAGGATGAGTTTCTTTCTCTATCATGTGATATCCTAGACCTTGTGCG
CGACCAGGGCTGCCTCTAA
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