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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005707453.1 |
| PFAMs | FAD_binding_8,Ferric_reduct,NAD_binding_6 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K13411,ko:K13447,ko:K21424 |
| KEGG TC | 5.B.1.1.5,5.B.1.2 |
| KEGG Pathway | ko04013,ko04016,ko04624,ko04626,map04013,map04016,map04624,map04626 |
| Evalue | 1.18e-52 |
| EggNOG OGs | KOG0039@1|root,KOG0039@2759|Eukaryota |
| EC | 1.6.3.1 |
| Description | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor |
| COG category | C |
| BRITE | ko00000,ko00001,ko01000,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra7620.t1.stop1 | Ggra7620.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000866_pilon 340120..340122 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra7620.t1.start1 | Ggra7620.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000866_pilon 342619..342621 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra7620.t1 ID=Ggra7620.t1|Name=Ggra7620.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=834bp MPAPEHPPAHAHPAMGKRVTRFFARVEANLSTYALLYLFLIFYFAANLLM FLWGFRGEIKFKDNILRGPVMRYIIGVARGAGYMLNLNTAFVILLAARLL FTKLRDTPIANVLPLDKAFPMLHIIVGYVTAISVVVHAGFHFGWLFGYNL WEWGLWSFNMSVITGALLIVVFATMLWFVRPSVRKKHFLLFYRVHIIGAI LFFLLLIFHGMYRNRPETYKYIVPTLIIYLTDRILRRLQVSTTTLQLSAS NSFFKDDNVLELRVPKPFQYRSGQYAELQVPSINREWHPFTIASAPHEET LALYIKKLGDWTGALHEEFAHRLNGDDEEPISVLVRGPYGAPCQHVRGYE RVVLISGGIGSTPFSAVCKELHHLNRENGTLEPEQPHVSEANLEMKQVEK RMYKAIRKLYDVNVDAAVHQVSAVDEQRSAFVTGMLHLAALSRSQNEPQI SSTEDSSTDADDGAHELNDLTSSDSFYDGEERQHRRKKEFHRDDAIFVSS MKAIPNARQKMINLFDSRSHVLTFLHSTRVQFFLLVSLIARIVNLSIGSI WASDFVSVLSEPTTSNGPWVVIVDTFLSLFVTFLIPLTVALEIAVMGSRF FSGTRLLDLFLLVPAAIATTALDIRTWVVGEPLDNIVVGLNYIVLLPVMF ILLLTRLHGTLGGRRLTDTSRRCQCHVHEKAPEVDFVWTTPKSDTDLWLR QELEPLAGGTKLRLHRYVTREKELDEEMGVGDEFIQDSNLGRPDWDSVFS DVASRAKSDTTIGVFFCGPHKMGDSIQKSIRKVEIVSALKGAYLRGLDVS TVSRDVGVGKRVVKRLEENGCSVRFAFREENFG* back to topspliced messenger RNA >Ggra7620.t1 ID=Ggra7620.t1|Name=Ggra7620.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2502bp|location=Sequence derived from alignment at tig00000866_pilon:340120..342621- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCCGCTCCAGAGCACCCGCCCGCTCACGCCCACCCGGCCATGGGTAA GCGTGTCACCCGCTTCTTCGCTCGCGTCGAGGCAAATTTGTCCACGTACG CCCTCCTTTACCTCTTCCTTATCTTCTATTTCGCCGCCAATCTGCTAATG TTTCTGTGGGGCTTCCGTGGTGAGATCAAATTCAAGGACAACATTCTACG AGGTCCAGTCATGCGATACATTATCGGTGTGGCTCGTGGTGCCGGTTACA TGCTCAACCTCAACACCGCTTTTGTTATCTTGCTTGCTGCCCGCCTTCTC TTCACAAAGCTTCGTGATACGCCTATCGCCAACGTTTTGCCACTTGACAA GGCTTTCCCCATGTTGCATATTATCGTAGGCTACGTCACAGCCATTAGCG TGGTCGTCCATGCCGGCTTTCACTTTGGCTGGCTCTTCGGCTACAACCTG TGGGAATGGGGTCTATGGAGCTTCAACATGAGCGTCATCACAGGCGCGCT CCTCATCGTCGTCTTCGCCACCATGCTGTGGTTTGTACGCCCCTCCGTTC GAAAGAAGCACTTCTTGCTCTTCTACCGCGTGCACATCATCGGTGCCATT CTGTTCTTCCTGCTTCTCATCTTCCATGGAATGTACCGCAACAGACCTGA GACGTACAAGTACATCGTGCCGACCCTCATTATTTACCTCACCGACCGAA TTCTACGACGCTTACAGGTGTCCACTACCACCTTGCAACTCTCCGCCTCC AACAGTTTCTTCAAGGATGACAACGTGTTGGAGCTGCGCGTGCCGAAACC ATTCCAGTACCGATCCGGTCAGTACGCAGAGTTGCAGGTACCTTCAATCA ACCGCGAGTGGCATCCGTTCACCATTGCTTCCGCGCCGCACGAAGAGACG CTTGCGCTGTACATCAAGAAGCTGGGTGATTGGACCGGCGCGTTGCATGA GGAATTCGCGCACCGTCTGAACGGCGATGATGAGGAGCCAATCTCGGTGC TGGTTCGTGGTCCGTACGGTGCACCATGCCAGCATGTGCGTGGATACGAG CGCGTTGTGCTCATCTCTGGCGGTATTGGCTCCACGCCGTTCTCCGCCGT GTGCAAGGAGTTGCACCATCTCAATCGTGAAAACGGAACTTTGGAGCCTG AGCAGCCTCACGTGTCCGAAGCCAACCTTGAGATGAAGCAGGTGGAGAAA CGTATGTACAAGGCCATCCGAAAGCTTTACGATGTCAATGTTGACGCCGC AGTCCATCAAGTGTCTGCCGTGGACGAGCAGCGCTCTGCTTTCGTCACTG GTATGCTGCACCTTGCGGCCTTGAGCCGTAGTCAAAACGAGCCGCAAATC TCCAGCACAGAAGATTCTTCGACAGATGCTGATGATGGAGCACACGAGCT GAACGATTTGACTTCTTCTGATTCATTCTACGATGGAGAGGAAAGGCAAC ACCGACGAAAGAAGGAGTTCCACAGGGATGATGCTATCTTTGTCTCAAGC ATGAAGGCAATTCCGAATGCCCGCCAGAAGATGATCAATTTGTTCGATTC TCGTTCTCATGTTCTCACGTTTCTTCATTCTACCCGCGTTCAGTTCTTTC TTCTGGTCAGTCTTATTGCCAGGATTGTCAATCTCTCAATTGGGAGTATC TGGGCTTCGGACTTCGTCTCAGTTCTTTCCGAGCCGACGACTAGCAATGG TCCATGGGTTGTGATTGTAGATACTTTCCTGAGTCTGTTTGTAACCTTTT TGATTCCTTTGACCGTAGCGCTGGAGATCGCTGTAATGGGGTCGCGCTTC TTCTCTGGAACCCGCTTATTGGACTTGTTCCTGCTCGTGCCGGCTGCTAT TGCCACCACCGCTCTTGACATTCGCACCTGGGTTGTCGGAGAACCATTGG ACAACATTGTGGTTGGCCTCAACTATATAGTACTACTCCCTGTCATGTTT ATTCTGCTTCTCACTCGCTTGCATGGTACGCTAGGCGGCCGTCGTCTGAC GGACACCAGCAGAAGATGCCAATGTCACGTACACGAGAAGGCACCTGAAG TTGACTTTGTGTGGACAACGCCCAAGTCGGACACCGACCTGTGGCTCCGA CAGGAGTTGGAACCACTGGCTGGTGGAACGAAGCTTCGCCTGCACAGATA CGTGACCCGAGAAAAGGAGCTCGATGAGGAGATGGGTGTCGGAGACGAAT TTATCCAAGACTCAAATCTCGGACGTCCTGACTGGGACTCTGTTTTCTCT GACGTAGCTTCAAGGGCCAAGAGTGACACGACTATTGGAGTTTTCTTCTG CGGTCCGCACAAAATGGGAGATTCAATCCAGAAGAGTATTCGAAAGGTGG AAATCGTGAGTGCACTGAAAGGTGCGTACCTGCGAGGCCTGGATGTTTCG ACCGTGAGTCGTGATGTGGGTGTTGGAAAGAGAGTGGTGAAGAGATTGGA AGAGAATGGTTGCTCAGTAAGGTTCGCATTCCGAGAAGAGAACTTTGGAT GA back to topprotein sequence of Ggra7620.t1 >Ggra7620.t1 ID=Ggra7620.t1|Name=Ggra7620.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=834bp
MPAPEHPPAHAHPAMGKRVTRFFARVEANLSTYALLYLFLIFYFAANLLM FLWGFRGEIKFKDNILRGPVMRYIIGVARGAGYMLNLNTAFVILLAARLL FTKLRDTPIANVLPLDKAFPMLHIIVGYVTAISVVVHAGFHFGWLFGYNL WEWGLWSFNMSVITGALLIVVFATMLWFVRPSVRKKHFLLFYRVHIIGAI LFFLLLIFHGMYRNRPETYKYIVPTLIIYLTDRILRRLQVSTTTLQLSAS NSFFKDDNVLELRVPKPFQYRSGQYAELQVPSINREWHPFTIASAPHEET LALYIKKLGDWTGALHEEFAHRLNGDDEEPISVLVRGPYGAPCQHVRGYE RVVLISGGIGSTPFSAVCKELHHLNRENGTLEPEQPHVSEANLEMKQVEK RMYKAIRKLYDVNVDAAVHQVSAVDEQRSAFVTGMLHLAALSRSQNEPQI SSTEDSSTDADDGAHELNDLTSSDSFYDGEERQHRRKKEFHRDDAIFVSS MKAIPNARQKMINLFDSRSHVLTFLHSTRVQFFLLVSLIARIVNLSIGSI WASDFVSVLSEPTTSNGPWVVIVDTFLSLFVTFLIPLTVALEIAVMGSRF FSGTRLLDLFLLVPAAIATTALDIRTWVVGEPLDNIVVGLNYIVLLPVMF ILLLTRLHGTLGGRRLTDTSRRCQCHVHEKAPEVDFVWTTPKSDTDLWLR QELEPLAGGTKLRLHRYVTREKELDEEMGVGDEFIQDSNLGRPDWDSVFS DVASRAKSDTTIGVFFCGPHKMGDSIQKSIRKVEIVSALKGAYLRGLDVS TVSRDVGVGKRVVKRLEENGCSVRFAFREENFG* back to topmRNA from alignment at tig00000866_pilon:340120..342621- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra7620.t1 ID=Ggra7620.t1|Name=Ggra7620.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2502bp|location=Sequence derived from alignment at tig00000866_pilon:340120..342621- (Gracilaria gracilis GNS1m male) ATGCCCGCTCCAGAGCACCCGCCCGCTCACGCCCACCCGGCCATGGGTAA
GCGTGTCACCCGCTTCTTCGCTCGCGTCGAGGCAAATTTGTCCACGTACG
CCCTCCTTTACCTCTTCCTTATCTTCTATTTCGCCGCCAATCTGCTAATG
TTTCTGTGGGGCTTCCGTGGTGAGATCAAATTCAAGGACAACATTCTACG
AGGTCCAGTCATGCGATACATTATCGGTGTGGCTCGTGGTGCCGGTTACA
TGCTCAACCTCAACACCGCTTTTGTTATCTTGCTTGCTGCCCGCCTTCTC
TTCACAAAGCTTCGTGATACGCCTATCGCCAACGTTTTGCCACTTGACAA
GGCTTTCCCCATGTTGCATATTATCGTAGGCTACGTCACAGCCATTAGCG
TGGTCGTCCATGCCGGCTTTCACTTTGGCTGGCTCTTCGGCTACAACCTG
TGGGAATGGGGTCTATGGAGCTTCAACATGAGCGTCATCACAGGCGCGCT
CCTCATCGTCGTCTTCGCCACCATGCTGTGGTTTGTACGCCCCTCCGTTC
GAAAGAAGCACTTCTTGCTCTTCTACCGCGTGCACATCATCGGTGCCATT
CTGTTCTTCCTGCTTCTCATCTTCCATGGAATGTACCGCAACAGACCTGA
GACGTACAAGTACATCGTGCCGACCCTCATTATTTACCTCACCGACCGAA
TTCTACGACGCTTACAGGTGTCCACTACCACCTTGCAACTCTCCGCCTCC
AACAGTTTCTTCAAGGATGACAACGTGTTGGAGCTGCGCGTGCCGAAACC
ATTCCAGTACCGATCCGGTCAGTACGCAGAGTTGCAGGTACCTTCAATCA
ACCGCGAGTGGCATCCGTTCACCATTGCTTCCGCGCCGCACGAAGAGACG
CTTGCGCTGTACATCAAGAAGCTGGGTGATTGGACCGGCGCGTTGCATGA
GGAATTCGCGCACCGTCTGAACGGCGATGATGAGGAGCCAATCTCGGTGC
TGGTTCGTGGTCCGTACGGTGCACCATGCCAGCATGTGCGTGGATACGAG
CGCGTTGTGCTCATCTCTGGCGGTATTGGCTCCACGCCGTTCTCCGCCGT
GTGCAAGGAGTTGCACCATCTCAATCGTGAAAACGGAACTTTGGAGCCTG
AGCAGCCTCACGTGTCCGAAGCCAACCTTGAGATGAAGCAGGTGGAGAAA
CGTATGTACAAGGCCATCCGAAAGCTTTACGATGTCAATGTTGACGCCGC
AGTCCATCAAGTGTCTGCCGTGGACGAGCAGCGCTCTGCTTTCGTCACTG
GTATGCTGCACCTTGCGGCCTTGAGCCGTAGTCAAAACGAGCCGCAAATC
TCCAGCACAGAAGATTCTTCGACAGATGCTGATGATGGAGCACACGAGCT
GAACGATTTGACTTCTTCTGATTCATTCTACGATGGAGAGGAAAGGCAAC
ACCGACGAAAGAAGGAGTTCCACAGGGATGATGCTATCTTTGTCTCAAGC
ATGAAGGCAATTCCGAATGCCCGCCAGAAGATGATCAATTTGTTCGATTC
TCGTTCTCATGTTCTCACGTTTCTTCATTCTACCCGCGTTCAGTTCTTTC
TTCTGGTCAGTCTTATTGCCAGGATTGTCAATCTCTCAATTGGGAGTATC
TGGGCTTCGGACTTCGTCTCAGTTCTTTCCGAGCCGACGACTAGCAATGG
TCCATGGGTTGTGATTGTAGATACTTTCCTGAGTCTGTTTGTAACCTTTT
TGATTCCTTTGACCGTAGCGCTGGAGATCGCTGTAATGGGGTCGCGCTTC
TTCTCTGGAACCCGCTTATTGGACTTGTTCCTGCTCGTGCCGGCTGCTAT
TGCCACCACCGCTCTTGACATTCGCACCTGGGTTGTCGGAGAACCATTGG
ACAACATTGTGGTTGGCCTCAACTATATAGTACTACTCCCTGTCATGTTT
ATTCTGCTTCTCACTCGCTTGCATGGTACGCTAGGCGGCCGTCGTCTGAC
GGACACCAGCAGAAGATGCCAATGTCACGTACACGAGAAGGCACCTGAAG
TTGACTTTGTGTGGACAACGCCCAAGTCGGACACCGACCTGTGGCTCCGA
CAGGAGTTGGAACCACTGGCTGGTGGAACGAAGCTTCGCCTGCACAGATA
CGTGACCCGAGAAAAGGAGCTCGATGAGGAGATGGGTGTCGGAGACGAAT
TTATCCAAGACTCAAATCTCGGACGTCCTGACTGGGACTCTGTTTTCTCT
GACGTAGCTTCAAGGGCCAAGAGTGACACGACTATTGGAGTTTTCTTCTG
CGGTCCGCACAAAATGGGAGATTCAATCCAGAAGAGTATTCGAAAGGTGG
AAATCGTGAGTGCACTGAAAGGTGCGTACCTGCGAGGCCTGGATGTTTCG
ACCGTGAGTCGTGATGTGGGTGTTGGAAAGAGAGTGGTGAAGAGATTGGA
AGAGAATGGTTGCTCAGTAAGGTTCGCATTCCGAGAAGAGAACTTTGGAT
GA back to topCoding sequence (CDS) from alignment at tig00000866_pilon:340120..342621- >Ggra7620.t1 ID=Ggra7620.t1|Name=Ggra7620.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2502bp|location=Sequence derived from alignment at tig00000866_pilon:340120..342621- (Gracilaria gracilis GNS1m male) ATGCCCGCTCCAGAGCACCCGCCCGCTCACGCCCACCCGGCCATGGGTAA GCGTGTCACCCGCTTCTTCGCTCGCGTCGAGGCAAATTTGTCCACGTACG CCCTCCTTTACCTCTTCCTTATCTTCTATTTCGCCGCCAATCTGCTAATG TTTCTGTGGGGCTTCCGTGGTGAGATCAAATTCAAGGACAACATTCTACG AGGTCCAGTCATGCGATACATTATCGGTGTGGCTCGTGGTGCCGGTTACA TGCTCAACCTCAACACCGCTTTTGTTATCTTGCTTGCTGCCCGCCTTCTC TTCACAAAGCTTCGTGATACGCCTATCGCCAACGTTTTGCCACTTGACAA GGCTTTCCCCATGTTGCATATTATCGTAGGCTACGTCACAGCCATTAGCG TGGTCGTCCATGCCGGCTTTCACTTTGGCTGGCTCTTCGGCTACAACCTG TGGGAATGGGGTCTATGGAGCTTCAACATGAGCGTCATCACAGGCGCGCT CCTCATCGTCGTCTTCGCCACCATGCTGTGGTTTGTACGCCCCTCCGTTC GAAAGAAGCACTTCTTGCTCTTCTACCGCGTGCACATCATCGGTGCCATT CTGTTCTTCCTGCTTCTCATCTTCCATGGAATGTACCGCAACAGACCTGA GACGTACAAGTACATCGTGCCGACCCTCATTATTTACCTCACCGACCGAA TTCTACGACGCTTACAGGTGTCCACTACCACCTTGCAACTCTCCGCCTCC AACAGTTTCTTCAAGGATGACAACGTGTTGGAGCTGCGCGTGCCGAAACC ATTCCAGTACCGATCCGGTCAGTACGCAGAGTTGCAGGTACCTTCAATCA ACCGCGAGTGGCATCCGTTCACCATTGCTTCCGCGCCGCACGAAGAGACG CTTGCGCTGTACATCAAGAAGCTGGGTGATTGGACCGGCGCGTTGCATGA GGAATTCGCGCACCGTCTGAACGGCGATGATGAGGAGCCAATCTCGGTGC TGGTTCGTGGTCCGTACGGTGCACCATGCCAGCATGTGCGTGGATACGAG CGCGTTGTGCTCATCTCTGGCGGTATTGGCTCCACGCCGTTCTCCGCCGT GTGCAAGGAGTTGCACCATCTCAATCGTGAAAACGGAACTTTGGAGCCTG AGCAGCCTCACGTGTCCGAAGCCAACCTTGAGATGAAGCAGGTGGAGAAA CGTATGTACAAGGCCATCCGAAAGCTTTACGATGTCAATGTTGACGCCGC AGTCCATCAAGTGTCTGCCGTGGACGAGCAGCGCTCTGCTTTCGTCACTG GTATGCTGCACCTTGCGGCCTTGAGCCGTAGTCAAAACGAGCCGCAAATC TCCAGCACAGAAGATTCTTCGACAGATGCTGATGATGGAGCACACGAGCT GAACGATTTGACTTCTTCTGATTCATTCTACGATGGAGAGGAAAGGCAAC ACCGACGAAAGAAGGAGTTCCACAGGGATGATGCTATCTTTGTCTCAAGC ATGAAGGCAATTCCGAATGCCCGCCAGAAGATGATCAATTTGTTCGATTC TCGTTCTCATGTTCTCACGTTTCTTCATTCTACCCGCGTTCAGTTCTTTC TTCTGGTCAGTCTTATTGCCAGGATTGTCAATCTCTCAATTGGGAGTATC TGGGCTTCGGACTTCGTCTCAGTTCTTTCCGAGCCGACGACTAGCAATGG TCCATGGGTTGTGATTGTAGATACTTTCCTGAGTCTGTTTGTAACCTTTT TGATTCCTTTGACCGTAGCGCTGGAGATCGCTGTAATGGGGTCGCGCTTC TTCTCTGGAACCCGCTTATTGGACTTGTTCCTGCTCGTGCCGGCTGCTAT TGCCACCACCGCTCTTGACATTCGCACCTGGGTTGTCGGAGAACCATTGG ACAACATTGTGGTTGGCCTCAACTATATAGTACTACTCCCTGTCATGTTT ATTCTGCTTCTCACTCGCTTGCATGGTACGCTAGGCGGCCGTCGTCTGAC GGACACCAGCAGAAGATGCCAATGTCACGTACACGAGAAGGCACCTGAAG TTGACTTTGTGTGGACAACGCCCAAGTCGGACACCGACCTGTGGCTCCGA CAGGAGTTGGAACCACTGGCTGGTGGAACGAAGCTTCGCCTGCACAGATA CGTGACCCGAGAAAAGGAGCTCGATGAGGAGATGGGTGTCGGAGACGAAT TTATCCAAGACTCAAATCTCGGACGTCCTGACTGGGACTCTGTTTTCTCT GACGTAGCTTCAAGGGCCAAGAGTGACACGACTATTGGAGTTTTCTTCTG CGGTCCGCACAAAATGGGAGATTCAATCCAGAAGAGTATTCGAAAGGTGG AAATCGTGAGTGCACTGAAAGGTGCGTACCTGCGAGGCCTGGATGTTTCG ACCGTGAGTCGTGATGTGGGTGTTGGAAAGAGAGTGGTGAAGAGATTGGA AGAGAATGGTTGCTCAGTAAGGTTCGCATTCCGAGAAGAGAACTTTGGAT GA back to top
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