Ggra762.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra762.t1
Unique NameGgra762.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length290
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:302107..302976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra762Ggra762Gracilaria gracilis GNS1m malegenetig00000164_pilon 302107..302976 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra762.t1.stop1Ggra762.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000164_pilon 302107..302109 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra762.t1.CDS1Ggra762.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000164_pilon 302107..302976 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra762.t1.exon1Ggra762.t1.exon1Gracilaria gracilis GNS1m maleexontig00000164_pilon 302107..302976 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra762.t1.start1Ggra762.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000164_pilon 302974..302976 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra762.t1Ggra762.t1Gracilaria gracilis GNS1m malepolypeptidetig00000164_pilon 302107..302976 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra762.t1 ID=Ggra762.t1|Name=Ggra762.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=290bp
MSENPHTEGDENIDVVEKCGKNPSVTKCIGKVRAKIPGDEGEYWNIIADV
CKLDGHRAEEAEKRIELKNYIRTQLEEIPNRKGLNKIGLFLNDFPACFDL
KSGYKKCVEETRLDAYNRAKTRGMKIFHENDAQLLAKWTLSHSIATGLGL
RPDSSPVIPEDSHREFWKARFLFAGKITKAEDVEKFKGVALDTVLARIWN
ADMTFKKKKTLEGGGVQQNLENCHNWYWKCKLSEATQERRKRYVEAGKES
LSAFDDGAKYRFDREEPIYLDCKDCYDIPKKGPMLLKPL*
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spliced messenger RNA

>Ggra762.t1 ID=Ggra762.t1|Name=Ggra762.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=870bp|location=Sequence derived from alignment at tig00000164_pilon:302107..302976- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGAAAATCCCCATACTGAAGGTGATGAGAATATAGATGTTGTTGA
GAAATGCGGCAAGAATCCTTCAGTTACGAAATGCATAGGCAAGGTCCGCG
CAAAGATACCTGGTGACGAAGGGGAATATTGGAACATTATAGCTGATGTC
TGCAAGTTGGACGGACACCGAGCAGAAGAAGCTGAAAAGAGAATTGAACT
CAAGAATTATATCAGAACCCAACTTGAAGAAATCCCGAACCGGAAAGGGT
TGAATAAAATAGGGCTCTTTCTGAACGACTTTCCTGCGTGTTTCGATTTG
AAGTCAGGTTACAAAAAATGTGTTGAGGAAACGAGATTAGATGCATACAA
CCGCGCCAAAACTCGGGGAATGAAAATATTTCATGAGAATGATGCTCAGC
TTCTGGCAAAGTGGACCTTATCACATTCCATTGCCACTGGATTGGGGCTC
CGACCCGATTCGTCTCCAGTGATTCCAGAAGACAGCCACCGCGAATTCTG
GAAGGCTCGATTTCTTTTTGCCGGAAAGATTACGAAGGCTGAGGATGTAG
AAAAGTTTAAAGGAGTAGCGTTGGACACAGTGTTAGCGAGAATATGGAAC
GCAGATATGACGTTTAAGAAGAAGAAGACGCTAGAAGGCGGAGGTGTGCA
ACAAAATCTCGAAAATTGCCACAATTGGTACTGGAAGTGCAAGCTATCAG
AAGCAACACAGGAACGAAGGAAGCGGTACGTCGAAGCGGGAAAAGAATCC
CTTTCGGCCTTTGATGACGGTGCCAAATACCGATTTGATCGAGAAGAGCC
TATTTATCTGGACTGCAAAGATTGCTATGACATTCCGAAAAAAGGCCCCA
TGTTGCTTAAGCCGCTGTAG
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protein sequence of Ggra762.t1

>Ggra762.t1 ID=Ggra762.t1|Name=Ggra762.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=290bp
MSENPHTEGDENIDVVEKCGKNPSVTKCIGKVRAKIPGDEGEYWNIIADV
CKLDGHRAEEAEKRIELKNYIRTQLEEIPNRKGLNKIGLFLNDFPACFDL
KSGYKKCVEETRLDAYNRAKTRGMKIFHENDAQLLAKWTLSHSIATGLGL
RPDSSPVIPEDSHREFWKARFLFAGKITKAEDVEKFKGVALDTVLARIWN
ADMTFKKKKTLEGGGVQQNLENCHNWYWKCKLSEATQERRKRYVEAGKES
LSAFDDGAKYRFDREEPIYLDCKDCYDIPKKGPMLLKPL*
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mRNA from alignment at tig00000164_pilon:302107..302976-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra762.t1 ID=Ggra762.t1|Name=Ggra762.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=870bp|location=Sequence derived from alignment at tig00000164_pilon:302107..302976- (Gracilaria gracilis GNS1m male)
ATGAGCGAAAATCCCCATACTGAAGGTGATGAGAATATAGATGTTGTTGA
GAAATGCGGCAAGAATCCTTCAGTTACGAAATGCATAGGCAAGGTCCGCG
CAAAGATACCTGGTGACGAAGGGGAATATTGGAACATTATAGCTGATGTC
TGCAAGTTGGACGGACACCGAGCAGAAGAAGCTGAAAAGAGAATTGAACT
CAAGAATTATATCAGAACCCAACTTGAAGAAATCCCGAACCGGAAAGGGT
TGAATAAAATAGGGCTCTTTCTGAACGACTTTCCTGCGTGTTTCGATTTG
AAGTCAGGTTACAAAAAATGTGTTGAGGAAACGAGATTAGATGCATACAA
CCGCGCCAAAACTCGGGGAATGAAAATATTTCATGAGAATGATGCTCAGC
TTCTGGCAAAGTGGACCTTATCACATTCCATTGCCACTGGATTGGGGCTC
CGACCCGATTCGTCTCCAGTGATTCCAGAAGACAGCCACCGCGAATTCTG
GAAGGCTCGATTTCTTTTTGCCGGAAAGATTACGAAGGCTGAGGATGTAG
AAAAGTTTAAAGGAGTAGCGTTGGACACAGTGTTAGCGAGAATATGGAAC
GCAGATATGACGTTTAAGAAGAAGAAGACGCTAGAAGGCGGAGGTGTGCA
ACAAAATCTCGAAAATTGCCACAATTGGTACTGGAAGTGCAAGCTATCAG
AAGCAACACAGGAACGAAGGAAGCGGTACGTCGAAGCGGGAAAAGAATCC
CTTTCGGCCTTTGATGACGGTGCCAAATACCGATTTGATCGAGAAGAGCC
TATTTATCTGGACTGCAAAGATTGCTATGACATTCCGAAAAAAGGCCCCA
TGTTGCTTAAGCCGCTGTAG
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Coding sequence (CDS) from alignment at tig00000164_pilon:302107..302976-

>Ggra762.t1 ID=Ggra762.t1|Name=Ggra762.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=870bp|location=Sequence derived from alignment at tig00000164_pilon:302107..302976- (Gracilaria gracilis GNS1m male)
ATGAGCGAAAATCCCCATACTGAAGGTGATGAGAATATAGATGTTGTTGA
GAAATGCGGCAAGAATCCTTCAGTTACGAAATGCATAGGCAAGGTCCGCG
CAAAGATACCTGGTGACGAAGGGGAATATTGGAACATTATAGCTGATGTC
TGCAAGTTGGACGGACACCGAGCAGAAGAAGCTGAAAAGAGAATTGAACT
CAAGAATTATATCAGAACCCAACTTGAAGAAATCCCGAACCGGAAAGGGT
TGAATAAAATAGGGCTCTTTCTGAACGACTTTCCTGCGTGTTTCGATTTG
AAGTCAGGTTACAAAAAATGTGTTGAGGAAACGAGATTAGATGCATACAA
CCGCGCCAAAACTCGGGGAATGAAAATATTTCATGAGAATGATGCTCAGC
TTCTGGCAAAGTGGACCTTATCACATTCCATTGCCACTGGATTGGGGCTC
CGACCCGATTCGTCTCCAGTGATTCCAGAAGACAGCCACCGCGAATTCTG
GAAGGCTCGATTTCTTTTTGCCGGAAAGATTACGAAGGCTGAGGATGTAG
AAAAGTTTAAAGGAGTAGCGTTGGACACAGTGTTAGCGAGAATATGGAAC
GCAGATATGACGTTTAAGAAGAAGAAGACGCTAGAAGGCGGAGGTGTGCA
ACAAAATCTCGAAAATTGCCACAATTGGTACTGGAAGTGCAAGCTATCAG
AAGCAACACAGGAACGAAGGAAGCGGTACGTCGAAGCGGGAAAAGAATCC
CTTTCGGCCTTTGATGACGGTGCCAAATACCGATTTGATCGAGAAGAGCC
TATTTATCTGGACTGCAAAGATTGCTATGACATTCCGAAAAAAGGCCCCA
TGTTGCTTAAGCCGCTGTAG
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