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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 521674.Plim_3648 |
| PFAMs | DUF1080,LRR_5,Pkinase |
| Max annot lvl | 203682|Planctomycetes |
| KEGG ko | ko:K12132 |
| Evalue | 7.08e-08 |
| EggNOG OGs | COG0515@1|root,COG0515@2|Bacteria,2IYF2@203682|Planctomycetes |
| EC | 2.7.11.1 |
| Description | COG0515 Serine threonine protein |
| COG category | KLT |
| BRITE | ko00000,ko01000,ko01001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra7615.t1.stop1 | Ggra7615.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000866_pilon 317712..317714 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra7615.t1.start1 | Ggra7615.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000866_pilon 322689..322691 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra7615.t1 ID=Ggra7615.t1|Name=Ggra7615.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=494bp MICNYVTEERKGKPQEVSNWSHAEKVGKGEDRKGIGFLLAWCNTCFGGIK HKRSLQCEDSTNAVETEICSLDWWDVDDDGYIHDNVCQALRRAGYYKQLM WLLSKPQWIVKRLQKNGIYEVEQDLENGKAVAKQRHPENKKIARHMEVVG KAARMGCSYVSNNKREAWFQIHGRLLWYATQCEKTRKFVKEIEEVAPRPW AKASIGLLQHAGGAASDILQSSGTVVSVFQDRETMLYFWKNDALNIGVSR YFFTSGLVQTQAFKPDEVEQHNLSEVESCAFSPDGKKLLTGHRNGKMCLW ETETGRIIRCINGHSRRIASVAISGDGSKAVSGSWDTTVRLWDMDSLAAV GESLVGHTKEVQSVAISHNGRWVVSGSWDKTVHLWNADRGETEGNPFVGH AKEVECVATSRDGRVLVSCSRDTTVRVWDADSGEAVGQPLQHGHIAACVA ISQDGRRVVSGSYDKTIGVWDVDNSGKASVEEKVEQLWWYSYC* back to topspliced messenger RNA >Ggra7615.t1 ID=Ggra7615.t1|Name=Ggra7615.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1482bp|location=Sequence derived from alignment at tig00000866_pilon:317712..322691- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGATATGTAATTATGTGACGGAGGAGCGAAAAGGTAAACCTCAAGAAGT GAGCAACTGGTCCCACGCAGAGAAGGTTGGAAAGGGAGAAGACAGAAAGG GGATAGGCTTTCTTCTCGCATGGTGCAATACTTGTTTTGGAGGTATCAAG CATAAACGTTCTCTACAATGTGAGGATAGTACGAATGCAGTTGAGACTGA AATATGTTCGCTTGATTGGTGGGATGTTGACGATGACGGTTATATTCACG ACAACGTTTGCCAGGCACTGCGAAGAGCTGGGTATTATAAGCAACTTATG TGGTTATTGTCAAAACCCCAATGGATAGTGAAACGACTGCAGAAGAATGG AATCTACGAAGTCGAACAAGACCTAGAAAACGGAAAGGCAGTTGCAAAGC AACGGCATCCTGAAAACAAAAAGATCGCCAGACATATGGAAGTTGTTGGG AAAGCGGCGCGCATGGGCTGCAGTTATGTGAGCAACAACAAAAGGGAAGC TTGGTTCCAGATACACGGACGGTTGCTCTGGTACGCAACGCAATGTGAGA AAACACGCAAATTTGTGAAGGAGATTGAAGAAGTTGCGCCAAGACCATGG GCAAAAGCATCGATTGGGCTGCTACAACATGCCGGAGGAGCTGCTTCAGA TATTCTTCAAAGTTCTGGAACAGTGGTTTCTGTGTTTCAGGATCGGGAAA CGATGCTCTACTTTTGGAAGAATGACGCCTTGAACATAGGAGTGTCTCGC TATTTCTTTACTAGTGGCCTCGTTCAGACTCAAGCTTTCAAACCCGACGA AGTCGAGCAGCACAACCTTTCTGAGGTGGAGAGTTGTGCTTTCTCGCCTG ATGGGAAGAAACTTTTGACGGGGCACAGAAATGGGAAGATGTGTCTCTGG GAGACAGAAACAGGGCGCATAATACGATGTATCAATGGCCACAGCAGACG AATTGCAAGTGTAGCTATAAGCGGCGACGGGAGCAAAGCGGTATCTGGTT CATGGGACACGACGGTTCGGTTGTGGGATATGGACAGCTTAGCGGCTGTG GGGGAGTCCCTCGTTGGTCACACGAAAGAGGTGCAGAGCGTTGCGATAAG CCACAACGGGAGATGGGTTGTTTCGGGTTCTTGGGATAAGACTGTTCACC TTTGGAATGCAGACAGGGGAGAGACTGAAGGGAATCCGTTCGTCGGCCAT GCGAAAGAGGTGGAGTGTGTTGCGACAAGCAGAGACGGGAGGGTACTGGT TTCATGTTCTAGGGACACGACGGTTCGGGTGTGGGATGCAGACAGTGGGG AAGCCGTTGGGCAACCCCTCCAACACGGACATATTGCTGCATGTGTTGCG ATTAGTCAGGACGGGAGACGCGTGGTGTCTGGTTCTTATGACAAGACAAT TGGGGTTTGGGATGTGGATAATAGCGGGAAGGCTAGTGTAGAGGAAAAGG TTGAACAACTTTGGTGGTATTCGTACTGCTAA back to topprotein sequence of Ggra7615.t1 >Ggra7615.t1 ID=Ggra7615.t1|Name=Ggra7615.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=494bp
MICNYVTEERKGKPQEVSNWSHAEKVGKGEDRKGIGFLLAWCNTCFGGIK HKRSLQCEDSTNAVETEICSLDWWDVDDDGYIHDNVCQALRRAGYYKQLM WLLSKPQWIVKRLQKNGIYEVEQDLENGKAVAKQRHPENKKIARHMEVVG KAARMGCSYVSNNKREAWFQIHGRLLWYATQCEKTRKFVKEIEEVAPRPW AKASIGLLQHAGGAASDILQSSGTVVSVFQDRETMLYFWKNDALNIGVSR YFFTSGLVQTQAFKPDEVEQHNLSEVESCAFSPDGKKLLTGHRNGKMCLW ETETGRIIRCINGHSRRIASVAISGDGSKAVSGSWDTTVRLWDMDSLAAV GESLVGHTKEVQSVAISHNGRWVVSGSWDKTVHLWNADRGETEGNPFVGH AKEVECVATSRDGRVLVSCSRDTTVRVWDADSGEAVGQPLQHGHIAACVA ISQDGRRVVSGSYDKTIGVWDVDNSGKASVEEKVEQLWWYSYC* back to topmRNA from alignment at tig00000866_pilon:317712..322691- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra7615.t1 ID=Ggra7615.t1|Name=Ggra7615.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4980bp|location=Sequence derived from alignment at tig00000866_pilon:317712..322691- (Gracilaria gracilis GNS1m male) ATGATATGTAATTATGTGACGGAGGAGCGAAAAGGTAAACCTCAAGAAGT
GAGCAACTGGTCCCACGCAGAGAAGGTTGGAAAGGGAGAAGACAGAAAGG
GGATAGGCTTTCTTCTCGCATGGTGCAATACTTGTTTTGGAGGTATCAAG
CATAAACGTTCTCTACAATGTGAGGATAGTACGAATGCAGTTGAGACTGA
AATATGTTCGCTTGATTGGTGGGATGTTGACGATGACGGTTATATTCACG
ACAACGTTTGCCAGGCACTGCGAAGAGCTGGGTATTATAAGCAACTTATG
TGGTTATTGTCAAAACCCCAATGGATAGTGAAACGACTGCAGAAGAATGG
AATCTACGAAGTCGAACAAGACCTAGAAAACGGAAAGGCAGTTGCAAAGC
AACGGCATCCTGAAAACAAAAAGATCGCCAGACATATGGAAGTTGTTGGG
AAAGCGGCGCGCATGGGCTGCAGTTATGTGAGCAACAACAAAAGGGAAGC
TTGGTTCCAGATACACGGACGGTTGCTCTGGTACGCAACGCAATGTGAGA
AAACACGCAAATTTGTGAAGGAGATTGAAGAAGTTGCGCCAAGACCATGG
GCAAAAGCATCGATTGGGCTGCTACAACATGCCGGAGGAGCTGCTTCAGA
TATTCTTCAAAGTTCTGGAACAGTGGTTTCTGTGTTTCAGGATCGGGAAA
CGATGCTCTACTTTTGGAAGAATGACGCCTTGAACATAGGAGTGTCTCGC
TATTTCTTTACTAGTGGCCTCGTTCAGACTCAAGCTTTCAAACCCGACGA
AGTCGAGCAGCACAACCTTTCTGAGGTGGAGAGTTGTGCTTTCTCGCCTG
ATGGGAAGAAACTTTTGACGGGGCACAGAAATGGGAAGATGTGTCTCTGG
GAGACAGAAACAGGGCGCATAATACGATGTATCAATGGCCACAGCAGACG
AATTGCAAGTGTAGCTATAAGCGGCGACGGGAGCAAAGCGGTATCTGGTT
CATGGGACACGACGGTTCGGTTGTGGGATATGGACAGCTTAGCGGCTGTG
GGGGAGTCCCTCGTTGGTCACACGAAAGAGGTGCAGAGCGTTGCGATAAG
CCACAACGGGAGATGGGTTGTTTCGGGTTCTTGGGATAAGACTGTTCACC
TTTGGAATGCAGACAGGGGAGAGACTGAAGGGAATCCGTTCGTCGGCCAT
GCGAAAGAGGTGGAGTGTGTTGCGACAAGCAGAGACGGGAGGGTACTGGT
TTCATGTTCTAGGGACACGACGGTTCGGGTGTGGGATGCAGACAGTGGGG
AAGCCGTTGGGCAACCCCTCCAACACGGACATATTGCTGCATGTGTTGCG
ATTAGTCAGGACGGGAGACGCGTGGTGTCTGGTTCTTATGACAAGACAAT
TGGGGTTTGGGATGTGGATAATAGCGGGTCTGTAGGGCGGCGGTCCCTCG
TCGGTCACACAGAAGGGGTAATGCGTGTTTCGATCAACGATTGCGGAACT
CGAGTGGTGTCCGGAGACCGGGAGAAGATGATTCGAGTGTGGAATGTGGA
CGATGGAGACGTGGTTGAACAGTCGCCTGTCGGGCACACAGGTTTGGTTA
AGTGTGTTGCGGTGTGTCGCGACGGAAGTAAAGTTGTTTCTGGATCTGTG
GATAGAACGGTTAGGGTGTGGGACTGCGATAGCGGGGAGGCGGTTGGTAC
AACGATGGACCACGGAAGTTATGTGCATCGCCTGGCGGTGAATCACGACG
GGTCACAGGTTGTATCATACGAGTACAGTGGCCTTGGAAAACTATGGGAC
GTGAACAACGGACGACGCGTGACGACCTCCGAAGAAGAAGGCTGGCAGTC
TACCCTCAACGATCTTGCTCTTTCGGAATCGAATGACTGGAGCCCAACGT
CAAACCAGGTGATCCATCGGGGCCCAGATGAACGTGACGTCGTTCTCGCA
ACTTGCGACTGTCCCGTTGAGCGGATTGGCGAATGTTGGTTTTCTCCCTA
CTTCGCACATTGTACAGTTGTAAGAGATACGACCACTTCGGTTTGATAAC
TACTTTACAATCGTTCCTCTGCCTCGGGTTTCCATTCAATTGTTCCCAAG
TCGGACATGACAGCGAGACCATTCCTGTGACAGTATAGAAGAAGGAAGTC
TTGATAGAACGTGATTACCAACAGCACTGTCCTTTAGCCCTTAAATACAT
GAGTGATAAATCCACGCTCAGGAAGAGAAGGAAACTTGCAGATGATAGTG
GATCACCTTGATACAATCAATGATGTTGGCCCCAAAATAGTCCTCTCTCT
CTCTCTCTCTTATGAGTGCACTAACTTAATTATGCCTTGGTGTAGAACGT
TTCTGTTCAAAGAAACGTTCTCTCACAAAGAAAGCCAACACTCTAGCGGG
CCATTTTCTGACTATACTAGCAACGGATTGTCCTTGGCGTTCTCGACGAG
AAGCTAGACATAAACGCCTGGAAAACTTTCTCTTGGGGCATCGCAGCAGG
TAATGGTCCACATCGTTCAGGACACCAGGTCTACAATTACATACCAACTT
CTTTCCACGTAAATGAGATCCAAGAGGATGTAAGCTTGGCGTACATATGT
CCCACGTAGATCTGTGCCAAAGCGGTTTACCTCTCTCTCTCTCCCTGGTA
CGGGCGCGGTAGTCTAATTCCTACTTACCGCAGTGCGCTTCAGTTGAAAG
AAACGCTCTCTCACTAGAAAACCCAGCACTCTTTCTTGCCATTTTCTAAT
TATCTGTGCAACAGTCATTCGTCGACGATCTTGACGAGGTGGTAGAGATA
TCATTCTGGAAGCGGTCCTCAACGGACATCGTAGAACGTAGTGCTCGACA
TCATTGAGGACTCCTGGTCGACATTTGCAAACTGCTCGCTTCCCTGTAAT
GTGAGTTGCTAATGGATGCAAGTAGGATGTATGTCCAACGAACAGCTGGG
CCAAGGTAACTTCTGCCTCTCTTTGAGAAAGAATGTTCTCAAAGGACTTC
GGTAATTCTGAAATCAGCGGGATGGAATTGGACTTCCCTAACACTCTCCT
CCGTACCTCTGCAAGATCGACCGGGACCAATATCTGTTCTTGTAACGGAG
TGTTTAATGCTTGTTTTGCCAAGTTATCTACCTGCTTATTCCTCGGAATT
CCACCAGTGACTTGGTACCCATAAAACGTGTACCGGGCATAAATTCCCCA
GTTCTGATAGCACTTTTGAAGTCTGCTGTACAGAGTACGAGTGTTGCCGA
ACCGGAGATTGTAGGTTTTCCATGACACTTGTGGAATCAGTGTCTATCAT
GACAATCCCTCTCCAACCCACTCTTACCTTTTCCAGTACACGCATAGTCG
CCGCCTTTATCGCTGCTACTTCCGCTAGAAATGGAGACACTCCGATTCCT
GCTGGCACCAATTTGGTCTCGGCCTGTGAAAGAGAGCGGCACCACATCGC
ATACGCACCACCGCCGACTGTAGAAACCTCAAGCACCTTCATGTTTAGCT
TGTCGCCGTCTTCATCTATAATTTCTCTTCCCCCCGGTAATATTCCATAT
GCTAACACGAAATGATCATCATGCTTAAAAACCATATCCAGTCCTCGTCC
ATGCTTCTTTTGAAAGTTCTTGACCGTTTCAAAGTTCCTGGTAAACTCCT
CACTATATTCAATCGAACCAGCATACTAGCTTTCATCCCACTCGACAGCT
GCTAGTAGTGGCTTAGAAGTATCTATCATTTCCGGACTTCCAACAGATTC
ATCGGTCCAAATCTCACAATGTGCCACCGGTAACGAATTTAAAGTCTGCA
TAGCTCCAAACAGTTGGTTGTCAACAGTATCCTCCTTAGAACAGTTGCTG
TAATGGTAATGCAGTACTCCCGTAGTTTGCAAACCAGGTTTTTCGGGTAG
TGGAGCCCTTCGCAACTGTAGCAGTCCTACGTCTGCAAATCGACTCTGAA
GCTTTCTGAACAAAATAGTCTTGGTGCGCATTGGTCGATTGCAACGCAAC
AAATGTTGCTGCTGTATACGAGAGATAGCGCACAATCCTACGGCATTGAT
ACTGAGTTGAAGACAGGAGCGATAACTGGAAGAAGCAGGTGTATGCGAGT
ATCGTTGCGGTGTATCGGACGCTGCAAGACAATGTATATCACGGCCGTGT
AGGACTTTGGCTCTTACAAACCAAAGTTGGGGGAGTTAGGAGACAAGTGA
AGAACACGACAAGAGCATAAATACCGCGCTTGGTCGGTGGTGCTCTCTAG
TCGGGAACGGCATCGAGGCTTTCGTCAATACCAAAGTCAGGAGGGTACCA
GATTTTTTCATTGATCTCACGAATGAAACTTTTTGTTCTCTCACATTCTA
AGCGCGATAGGAGATAATCTTGTTCTCGACGCCATTTCATATACCAATCC
GGAGTAGATATGGAATCGCAACCTTGGAACAACGTCTCTTTTACCATATT
GAAGTGTTTGAGCAGGTCTTGATTGTCGTGAACAGTTTCACAAACTACCT
GCTTTACATGTTCAAGATCTTGATCCACCAGGTACATTCCGCCATCCTGA
TATCTCGCCACTATCCATTGGGGTGTTGATAGCAACCACATTGGTTGTTC
ATCGTAGGCTGCACTTCGGAGAACCCAACATATGTTATCGTGGATAAACC
CGTCATCTTCTACATCCCACCATGCATATGACCCATTCTTGGTCTCTGCT
ACCTGCTCAGTACTGTCATTATCTACATCATATGTCTCCTTCTTTCTGTT
ATGCAGACTTCATTTGTACCAGCGACCAACCTGAATTTCCTCCACATCTG
TGTTGCCATACAGGAAGGCTAGTGTAGAGGAAAAGGTTGAACAACTTTGG
TGGTATTCGTAAGTTGCATCCCCTTGCACAATATCGACCCCGTAACCACA
AAGGTTATTTTCTTGCCACCCAAACGAGCTGACAGCACTTTTGGAATCTT
TATGGCGGACAACCGACTAGGTACTGCTAA back to topCoding sequence (CDS) from alignment at tig00000866_pilon:317712..322691- >Ggra7615.t1 ID=Ggra7615.t1|Name=Ggra7615.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1482bp|location=Sequence derived from alignment at tig00000866_pilon:317712..322691- (Gracilaria gracilis GNS1m male) ATGATATGTAATTATGTGACGGAGGAGCGAAAAGGTAAACCTCAAGAAGT GAGCAACTGGTCCCACGCAGAGAAGGTTGGAAAGGGAGAAGACAGAAAGG GGATAGGCTTTCTTCTCGCATGGTGCAATACTTGTTTTGGAGGTATCAAG CATAAACGTTCTCTACAATGTGAGGATAGTACGAATGCAGTTGAGACTGA AATATGTTCGCTTGATTGGTGGGATGTTGACGATGACGGTTATATTCACG ACAACGTTTGCCAGGCACTGCGAAGAGCTGGGTATTATAAGCAACTTATG TGGTTATTGTCAAAACCCCAATGGATAGTGAAACGACTGCAGAAGAATGG AATCTACGAAGTCGAACAAGACCTAGAAAACGGAAAGGCAGTTGCAAAGC AACGGCATCCTGAAAACAAAAAGATCGCCAGACATATGGAAGTTGTTGGG AAAGCGGCGCGCATGGGCTGCAGTTATGTGAGCAACAACAAAAGGGAAGC TTGGTTCCAGATACACGGACGGTTGCTCTGGTACGCAACGCAATGTGAGA AAACACGCAAATTTGTGAAGGAGATTGAAGAAGTTGCGCCAAGACCATGG GCAAAAGCATCGATTGGGCTGCTACAACATGCCGGAGGAGCTGCTTCAGA TATTCTTCAAAGTTCTGGAACAGTGGTTTCTGTGTTTCAGGATCGGGAAA CGATGCTCTACTTTTGGAAGAATGACGCCTTGAACATAGGAGTGTCTCGC TATTTCTTTACTAGTGGCCTCGTTCAGACTCAAGCTTTCAAACCCGACGA AGTCGAGCAGCACAACCTTTCTGAGGTGGAGAGTTGTGCTTTCTCGCCTG ATGGGAAGAAACTTTTGACGGGGCACAGAAATGGGAAGATGTGTCTCTGG GAGACAGAAACAGGGCGCATAATACGATGTATCAATGGCCACAGCAGACG AATTGCAAGTGTAGCTATAAGCGGCGACGGGAGCAAAGCGGTATCTGGTT CATGGGACACGACGGTTCGGTTGTGGGATATGGACAGCTTAGCGGCTGTG GGGGAGTCCCTCGTTGGTCACACGAAAGAGGTGCAGAGCGTTGCGATAAG CCACAACGGGAGATGGGTTGTTTCGGGTTCTTGGGATAAGACTGTTCACC TTTGGAATGCAGACAGGGGAGAGACTGAAGGGAATCCGTTCGTCGGCCAT GCGAAAGAGGTGGAGTGTGTTGCGACAAGCAGAGACGGGAGGGTACTGGT TTCATGTTCTAGGGACACGACGGTTCGGGTGTGGGATGCAGACAGTGGGG AAGCCGTTGGGCAACCCCTCCAACACGGACATATTGCTGCATGTGTTGCG ATTAGTCAGGACGGGAGACGCGTGGTGTCTGGTTCTTATGACAAGACAAT TGGGGTTTGGGATGTGGATAATAGCGGGAAGGCTAGTGTAGAGGAAAAGG TTGAACAACTTTGGTGGTATTCGTACTGCTAA back to top
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