Ggra7599.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7599.t1
Unique NameGgra7599.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length172
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:274068..274583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7599Ggra7599Gracilaria gracilis GNS1m malegenetig00000866_pilon 274068..274583 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7599.t1.stop1Ggra7599.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000866_pilon 274068..274070 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7599.t1.CDS1Ggra7599.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000866_pilon 274068..274583 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7599.t1.exon1Ggra7599.t1.exon1Gracilaria gracilis GNS1m maleexontig00000866_pilon 274068..274583 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7599.t1.start1Ggra7599.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000866_pilon 274581..274583 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7599.t1Ggra7599.t1Gracilaria gracilis GNS1m malepolypeptidetig00000866_pilon 274068..274583 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7599.t1 ID=Ggra7599.t1|Name=Ggra7599.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=172bp
MVPAPSLRRSTSDTRSQRTQQPFDDALPPLHPNPSAHHIQWHQDVIDLIR
NLPLTLTEEQSIISLFCCHSIVSFDDLMDNHPSAKETKARFRDYIASLWT
QWLNHSINKDDMIAHMFRWVRSASTPTQHLDIIEDFVSWFETHYASTDTH
NNSNKLQLSTILSDDKENQSS*
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spliced messenger RNA

>Ggra7599.t1 ID=Ggra7599.t1|Name=Ggra7599.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=516bp|location=Sequence derived from alignment at tig00000866_pilon:274068..274583- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTCCTGCCCCGAGCTTGCGTCGCTCCACCTCGGACACACGCTCTCA
ACGCACCCAACAACCCTTTGACGACGCTTTGCCCCCGCTCCACCCCAATC
CATCCGCCCATCACATTCAATGGCATCAAGACGTCATTGACTTGATTCGC
AACCTCCCTTTGACTCTCACCGAAGAGCAATCTATCATCAGCCTCTTTTG
CTGTCACTCCATCGTGTCTTTCGATGATTTGATGGACAACCACCCCTCTG
CAAAAGAAACCAAAGCTCGTTTTCGTGACTACATCGCCTCCTTGTGGACC
CAATGGCTCAACCACTCTATCAACAAGGACGACATGATTGCCCACATGTT
CCGTTGGGTGCGTAGTGCAAGCACGCCTACGCAACATCTGGATATCATTG
AAGACTTTGTGTCCTGGTTTGAAACCCACTATGCAAGTACTGATACTCAT
AACAACTCTAACAAGCTACAACTATCAACCATCCTCTCCGATGATAAGGA
AAACCAATCCAGCTGA
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protein sequence of Ggra7599.t1

>Ggra7599.t1 ID=Ggra7599.t1|Name=Ggra7599.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=172bp
MVPAPSLRRSTSDTRSQRTQQPFDDALPPLHPNPSAHHIQWHQDVIDLIR
NLPLTLTEEQSIISLFCCHSIVSFDDLMDNHPSAKETKARFRDYIASLWT
QWLNHSINKDDMIAHMFRWVRSASTPTQHLDIIEDFVSWFETHYASTDTH
NNSNKLQLSTILSDDKENQSS*
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mRNA from alignment at tig00000866_pilon:274068..274583-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7599.t1 ID=Ggra7599.t1|Name=Ggra7599.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=516bp|location=Sequence derived from alignment at tig00000866_pilon:274068..274583- (Gracilaria gracilis GNS1m male)
ATGGTTCCTGCCCCGAGCTTGCGTCGCTCCACCTCGGACACACGCTCTCA
ACGCACCCAACAACCCTTTGACGACGCTTTGCCCCCGCTCCACCCCAATC
CATCCGCCCATCACATTCAATGGCATCAAGACGTCATTGACTTGATTCGC
AACCTCCCTTTGACTCTCACCGAAGAGCAATCTATCATCAGCCTCTTTTG
CTGTCACTCCATCGTGTCTTTCGATGATTTGATGGACAACCACCCCTCTG
CAAAAGAAACCAAAGCTCGTTTTCGTGACTACATCGCCTCCTTGTGGACC
CAATGGCTCAACCACTCTATCAACAAGGACGACATGATTGCCCACATGTT
CCGTTGGGTGCGTAGTGCAAGCACGCCTACGCAACATCTGGATATCATTG
AAGACTTTGTGTCCTGGTTTGAAACCCACTATGCAAGTACTGATACTCAT
AACAACTCTAACAAGCTACAACTATCAACCATCCTCTCCGATGATAAGGA
AAACCAATCCAGCTGA
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Coding sequence (CDS) from alignment at tig00000866_pilon:274068..274583-

>Ggra7599.t1 ID=Ggra7599.t1|Name=Ggra7599.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=516bp|location=Sequence derived from alignment at tig00000866_pilon:274068..274583- (Gracilaria gracilis GNS1m male)
ATGGTTCCTGCCCCGAGCTTGCGTCGCTCCACCTCGGACACACGCTCTCA
ACGCACCCAACAACCCTTTGACGACGCTTTGCCCCCGCTCCACCCCAATC
CATCCGCCCATCACATTCAATGGCATCAAGACGTCATTGACTTGATTCGC
AACCTCCCTTTGACTCTCACCGAAGAGCAATCTATCATCAGCCTCTTTTG
CTGTCACTCCATCGTGTCTTTCGATGATTTGATGGACAACCACCCCTCTG
CAAAAGAAACCAAAGCTCGTTTTCGTGACTACATCGCCTCCTTGTGGACC
CAATGGCTCAACCACTCTATCAACAAGGACGACATGATTGCCCACATGTT
CCGTTGGGTGCGTAGTGCAAGCACGCCTACGCAACATCTGGATATCATTG
AAGACTTTGTGTCCTGGTTTGAAACCCACTATGCAAGTACTGATACTCAT
AACAACTCTAACAAGCTACAACTATCAACCATCCTCTCCGATGATAAGGA
AAACCAATCCAGCTGA
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