Ggra7577.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7577.t1
Unique NameGgra7577.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length229
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:105214..105900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog691883.XP_009497104.1
Preferred nameFUR1
PFAMsUPRTase
Max annot lvl33154|Opisthokonta
KEGG rclassRC00063
KEGG koko:K00761
KEGG ReactionR00966
KEGG Pathwayko00240,ko01100,map00240,map01100
GOsGO:0003674,GO:0003824,GO:0004845,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006223,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016763,GO:0016772,GO:0017144,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0019860,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043100,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046107,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Evalue9.07e-75
EggNOG OGsCOG0572@1|root,KOG4203@2759|Eukaryota,38HIZ@33154|Opisthokonta
EC2.4.2.9
Descriptionuracil phosphoribosyltransferase activity
COG categoryTZ
BRITEko00000,ko00001,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7577Ggra7577Gracilaria gracilis GNS1m malegenetig00000866_pilon 105214..105900 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7577.t1.start1Ggra7577.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000866_pilon 105214..105216 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7577.t1.CDS1Ggra7577.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000866_pilon 105214..105900 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7577.t1.exon1Ggra7577.t1.exon1Gracilaria gracilis GNS1m maleexontig00000866_pilon 105214..105900 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7577.t1.stop1Ggra7577.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000866_pilon 105898..105900 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7577.t1Ggra7577.t1Gracilaria gracilis GNS1m malepolypeptidetig00000866_pilon 105214..105900 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7577.t1 ID=Ggra7577.t1|Name=Ggra7577.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=229bp
MRFEMSSGGQWPQLHVHQQTAQLRCLMTTLCDKQCPPSDWVFTADRVNRI
MVEFALNFLPVQPHHVVTPVDDEPLQGVKFAGRIVGVSIVRAGEAMETAL
RSCCRNVRLGKILVQRDEKTAAPHYYMAKLPHDVATRHVLLMDPMLATGG
SALMAVGKLLEAGVSEPNIIFVNVVASPEGIHTLLSKHPAIQICTASIAE
GLNSHKYIRKSLGDFGDRYFGTQPNPPS*
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spliced messenger RNA

>Ggra7577.t1 ID=Ggra7577.t1|Name=Ggra7577.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=687bp|location=Sequence derived from alignment at tig00000866_pilon:105214..105900+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCTTCGAGATGAGCAGCGGCGGGCAGTGGCCGCAGCTGCACGTCCA
CCAGCAGACCGCGCAGCTACGATGCCTCATGACCACGCTGTGCGACAAGC
AATGCCCCCCCTCCGACTGGGTGTTCACCGCCGACCGCGTCAACCGCATC
ATGGTCGAGTTCGCGCTCAACTTCCTGCCCGTCCAGCCGCACCACGTCGT
CACCCCCGTCGACGATGAGCCTCTGCAAGGCGTCAAGTTTGCCGGTCGCA
TCGTAGGCGTGTCCATCGTGCGCGCCGGCGAGGCCATGGAGACTGCGTTG
CGTTCGTGTTGTCGAAACGTGCGCCTGGGCAAGATCCTCGTACAACGCGA
CGAGAAAACCGCTGCTCCGCACTACTACATGGCCAAGCTTCCTCACGACG
TTGCCACGCGCCATGTGCTGCTCATGGACCCCATGCTGGCCACCGGCGGC
TCGGCGCTTATGGCCGTTGGTAAGCTGTTGGAAGCCGGCGTGTCCGAGCC
TAACATTATCTTTGTCAACGTCGTTGCGTCGCCTGAGGGTATTCATACCC
TGCTGTCCAAGCACCCTGCCATTCAGATATGCACTGCTAGCATCGCCGAA
GGGCTTAATTCGCACAAGTATATCCGCAAATCCTTGGGCGACTTTGGCGA
TCGCTACTTTGGTACTCAGCCCAACCCGCCTAGCTGA
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protein sequence of Ggra7577.t1

>Ggra7577.t1 ID=Ggra7577.t1|Name=Ggra7577.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=229bp
MRFEMSSGGQWPQLHVHQQTAQLRCLMTTLCDKQCPPSDWVFTADRVNRI
MVEFALNFLPVQPHHVVTPVDDEPLQGVKFAGRIVGVSIVRAGEAMETAL
RSCCRNVRLGKILVQRDEKTAAPHYYMAKLPHDVATRHVLLMDPMLATGG
SALMAVGKLLEAGVSEPNIIFVNVVASPEGIHTLLSKHPAIQICTASIAE
GLNSHKYIRKSLGDFGDRYFGTQPNPPS*
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mRNA from alignment at tig00000866_pilon:105214..105900+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7577.t1 ID=Ggra7577.t1|Name=Ggra7577.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=687bp|location=Sequence derived from alignment at tig00000866_pilon:105214..105900+ (Gracilaria gracilis GNS1m male)
ATGCGCTTCGAGATGAGCAGCGGCGGGCAGTGGCCGCAGCTGCACGTCCA
CCAGCAGACCGCGCAGCTACGATGCCTCATGACCACGCTGTGCGACAAGC
AATGCCCCCCCTCCGACTGGGTGTTCACCGCCGACCGCGTCAACCGCATC
ATGGTCGAGTTCGCGCTCAACTTCCTGCCCGTCCAGCCGCACCACGTCGT
CACCCCCGTCGACGATGAGCCTCTGCAAGGCGTCAAGTTTGCCGGTCGCA
TCGTAGGCGTGTCCATCGTGCGCGCCGGCGAGGCCATGGAGACTGCGTTG
CGTTCGTGTTGTCGAAACGTGCGCCTGGGCAAGATCCTCGTACAACGCGA
CGAGAAAACCGCTGCTCCGCACTACTACATGGCCAAGCTTCCTCACGACG
TTGCCACGCGCCATGTGCTGCTCATGGACCCCATGCTGGCCACCGGCGGC
TCGGCGCTTATGGCCGTTGGTAAGCTGTTGGAAGCCGGCGTGTCCGAGCC
TAACATTATCTTTGTCAACGTCGTTGCGTCGCCTGAGGGTATTCATACCC
TGCTGTCCAAGCACCCTGCCATTCAGATATGCACTGCTAGCATCGCCGAA
GGGCTTAATTCGCACAAGTATATCCGCAAATCCTTGGGCGACTTTGGCGA
TCGCTACTTTGGTACTCAGCCCAACCCGCCTAGCTGA
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Coding sequence (CDS) from alignment at tig00000866_pilon:105214..105900+

>Ggra7577.t1 ID=Ggra7577.t1|Name=Ggra7577.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=687bp|location=Sequence derived from alignment at tig00000866_pilon:105214..105900+ (Gracilaria gracilis GNS1m male)
ATGCGCTTCGAGATGAGCAGCGGCGGGCAGTGGCCGCAGCTGCACGTCCA
CCAGCAGACCGCGCAGCTACGATGCCTCATGACCACGCTGTGCGACAAGC
AATGCCCCCCCTCCGACTGGGTGTTCACCGCCGACCGCGTCAACCGCATC
ATGGTCGAGTTCGCGCTCAACTTCCTGCCCGTCCAGCCGCACCACGTCGT
CACCCCCGTCGACGATGAGCCTCTGCAAGGCGTCAAGTTTGCCGGTCGCA
TCGTAGGCGTGTCCATCGTGCGCGCCGGCGAGGCCATGGAGACTGCGTTG
CGTTCGTGTTGTCGAAACGTGCGCCTGGGCAAGATCCTCGTACAACGCGA
CGAGAAAACCGCTGCTCCGCACTACTACATGGCCAAGCTTCCTCACGACG
TTGCCACGCGCCATGTGCTGCTCATGGACCCCATGCTGGCCACCGGCGGC
TCGGCGCTTATGGCCGTTGGTAAGCTGTTGGAAGCCGGCGTGTCCGAGCC
TAACATTATCTTTGTCAACGTCGTTGCGTCGCCTGAGGGTATTCATACCC
TGCTGTCCAAGCACCCTGCCATTCAGATATGCACTGCTAGCATCGCCGAA
GGGCTTAATTCGCACAAGTATATCCGCAAATCCTTGGGCGACTTTGGCGA
TCGCTACTTTGGTACTCAGCCCAACCCGCCTAGCTGA
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