Ggra7250.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7250.t1
Unique NameGgra7250.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length241
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:453619..454341 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7250Ggra7250Gracilaria gracilis GNS1m malegenetig00000871_pilon 453619..454341 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7250.t1.start1Ggra7250.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000871_pilon 453619..453621 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7250.t1.CDS1Ggra7250.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000871_pilon 453619..454341 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7250.t1.exon1Ggra7250.t1.exon1Gracilaria gracilis GNS1m maleexontig00000871_pilon 453619..454341 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7250.t1.stop1Ggra7250.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000871_pilon 454339..454341 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7250.t1Ggra7250.t1Gracilaria gracilis GNS1m malepolypeptidetig00000871_pilon 453619..454341 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7250.t1 ID=Ggra7250.t1|Name=Ggra7250.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=241bp
MGAISRTAAGYSSEHNDDSNRKRKKEIALRCQKAGAIEMESPSLVRSSEA
KKQKLDRVLERNITKVSSSVDAITEALKGSSASKKQPTSIALQLKITHRM
SLPPIELNQRLENPMKQAATMRGFNENITANIEETIEERGIQADALQHPL
NSTSSSAFQRNVHKASESETEGSNEEEGENAASISIIGTKSSSMSNRINN
EMENGNRGRLRRFSAVGGGLLIYWSSQGCWSRVRCGKAYS*
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spliced messenger RNA

>Ggra7250.t1 ID=Ggra7250.t1|Name=Ggra7250.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=723bp|location=Sequence derived from alignment at tig00000871_pilon:453619..454341+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGAGCCATCTCTCGCACGGCAGCCGGGTACTCTTCCGAGCACAATGA
TGACTCTAATAGGAAGCGGAAGAAAGAGATTGCCTTGCGCTGTCAAAAGG
CTGGGGCTATCGAAATGGAGTCACCATCGCTCGTGCGTTCGTCAGAAGCA
AAAAAGCAGAAATTGGACAGAGTACTTGAGCGTAATATAACAAAAGTATC
GTCTAGCGTAGATGCCATAACGGAAGCCTTAAAAGGCTCTTCGGCCTCTA
AAAAACAGCCAACTTCTATTGCACTACAGCTCAAGATCACCCATCGCATG
TCGCTGCCACCGATTGAGCTGAACCAAAGACTTGAGAACCCCATGAAACA
AGCAGCAACTATGCGCGGCTTCAATGAAAACATTACTGCGAATATAGAAG
AAACCATTGAAGAACGAGGGATCCAAGCCGACGCCCTCCAACATCCTCTG
AATAGCACTTCTTCCTCCGCTTTCCAGCGCAATGTGCATAAAGCGTCGGA
ATCCGAAACAGAAGGCTCCAACGAAGAAGAAGGAGAGAACGCTGCATCAA
TTAGTATTATTGGCACCAAATCAAGTTCAATGAGTAATCGAATCAATAAC
GAAATGGAAAACGGAAATCGGGGACGGCTTAGGCGCTTTAGTGCCGTCGG
AGGCGGGTTACTGATCTACTGGTCTTCGCAGGGATGTTGGAGTCGTGTAA
GGTGCGGAAAAGCGTATTCATGA
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protein sequence of Ggra7250.t1

>Ggra7250.t1 ID=Ggra7250.t1|Name=Ggra7250.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=241bp
MGAISRTAAGYSSEHNDDSNRKRKKEIALRCQKAGAIEMESPSLVRSSEA
KKQKLDRVLERNITKVSSSVDAITEALKGSSASKKQPTSIALQLKITHRM
SLPPIELNQRLENPMKQAATMRGFNENITANIEETIEERGIQADALQHPL
NSTSSSAFQRNVHKASESETEGSNEEEGENAASISIIGTKSSSMSNRINN
EMENGNRGRLRRFSAVGGGLLIYWSSQGCWSRVRCGKAYS*
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mRNA from alignment at tig00000871_pilon:453619..454341+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7250.t1 ID=Ggra7250.t1|Name=Ggra7250.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=723bp|location=Sequence derived from alignment at tig00000871_pilon:453619..454341+ (Gracilaria gracilis GNS1m male)
ATGGGAGCCATCTCTCGCACGGCAGCCGGGTACTCTTCCGAGCACAATGA
TGACTCTAATAGGAAGCGGAAGAAAGAGATTGCCTTGCGCTGTCAAAAGG
CTGGGGCTATCGAAATGGAGTCACCATCGCTCGTGCGTTCGTCAGAAGCA
AAAAAGCAGAAATTGGACAGAGTACTTGAGCGTAATATAACAAAAGTATC
GTCTAGCGTAGATGCCATAACGGAAGCCTTAAAAGGCTCTTCGGCCTCTA
AAAAACAGCCAACTTCTATTGCACTACAGCTCAAGATCACCCATCGCATG
TCGCTGCCACCGATTGAGCTGAACCAAAGACTTGAGAACCCCATGAAACA
AGCAGCAACTATGCGCGGCTTCAATGAAAACATTACTGCGAATATAGAAG
AAACCATTGAAGAACGAGGGATCCAAGCCGACGCCCTCCAACATCCTCTG
AATAGCACTTCTTCCTCCGCTTTCCAGCGCAATGTGCATAAAGCGTCGGA
ATCCGAAACAGAAGGCTCCAACGAAGAAGAAGGAGAGAACGCTGCATCAA
TTAGTATTATTGGCACCAAATCAAGTTCAATGAGTAATCGAATCAATAAC
GAAATGGAAAACGGAAATCGGGGACGGCTTAGGCGCTTTAGTGCCGTCGG
AGGCGGGTTACTGATCTACTGGTCTTCGCAGGGATGTTGGAGTCGTGTAA
GGTGCGGAAAAGCGTATTCATGA
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Coding sequence (CDS) from alignment at tig00000871_pilon:453619..454341+

>Ggra7250.t1 ID=Ggra7250.t1|Name=Ggra7250.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=723bp|location=Sequence derived from alignment at tig00000871_pilon:453619..454341+ (Gracilaria gracilis GNS1m male)
ATGGGAGCCATCTCTCGCACGGCAGCCGGGTACTCTTCCGAGCACAATGA
TGACTCTAATAGGAAGCGGAAGAAAGAGATTGCCTTGCGCTGTCAAAAGG
CTGGGGCTATCGAAATGGAGTCACCATCGCTCGTGCGTTCGTCAGAAGCA
AAAAAGCAGAAATTGGACAGAGTACTTGAGCGTAATATAACAAAAGTATC
GTCTAGCGTAGATGCCATAACGGAAGCCTTAAAAGGCTCTTCGGCCTCTA
AAAAACAGCCAACTTCTATTGCACTACAGCTCAAGATCACCCATCGCATG
TCGCTGCCACCGATTGAGCTGAACCAAAGACTTGAGAACCCCATGAAACA
AGCAGCAACTATGCGCGGCTTCAATGAAAACATTACTGCGAATATAGAAG
AAACCATTGAAGAACGAGGGATCCAAGCCGACGCCCTCCAACATCCTCTG
AATAGCACTTCTTCCTCCGCTTTCCAGCGCAATGTGCATAAAGCGTCGGA
ATCCGAAACAGAAGGCTCCAACGAAGAAGAAGGAGAGAACGCTGCATCAA
TTAGTATTATTGGCACCAAATCAAGTTCAATGAGTAATCGAATCAATAAC
GAAATGGAAAACGGAAATCGGGGACGGCTTAGGCGCTTTAGTGCCGTCGG
AGGCGGGTTACTGATCTACTGGTCTTCGCAGGGATGTTGGAGTCGTGTAA
GGTGCGGAAAAGCGTATTCATGA
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