Ggra7004.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7004.t1
Unique NameGgra7004.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length552
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000211_piloncontigtig00000211_pilon:166452..168107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog45157.CMK041CT
PFAMsPK,PK_C
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00015
KEGG koko:K00873
KEGG ReactionR00200,R00430,R01138,R01858,R02320
KEGG Pathwayko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230
KEGG ModuleM00001,M00002,M00049,M00050
GOsGO:0000003,GO:0000287,GO:0003006,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006629,GO:0006631,GO:0006633,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009791,GO:0009987,GO:0010035,GO:0010038,GO:0010154,GO:0010431,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0021700,GO:0022414,GO:0030955,GO:0031420,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046686,GO:0046700,GO:0046872,GO:0046939,GO:0048316,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0061458,GO:0071695,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
Evalue3.97e-202
EggNOG OGsCOG0469@1|root,KOG2323@2759|Eukaryota
EC2.7.1.40
Descriptionpyruvate kinase activity
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7004Ggra7004Gracilaria gracilis GNS1m malegenetig00000211_pilon 166452..168107 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7004.t1.start1Ggra7004.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000211_pilon 166452..166454 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7004.t1.CDS1Ggra7004.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000211_pilon 166452..168107 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7004.t1.exon1Ggra7004.t1.exon1Gracilaria gracilis GNS1m maleexontig00000211_pilon 166452..168107 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7004.t1.stop1Ggra7004.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000211_pilon 168105..168107 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7004.t1Ggra7004.t1Gracilaria gracilis GNS1m malepolypeptidetig00000211_pilon 166452..168107 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7004.t1 ID=Ggra7004.t1|Name=Ggra7004.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=552bp
MSAFAVSPSLPIHGPGIARFTSSTFVQRSAPLVRSARTPARWRAVATSRG
EATSLGFAKDAYHDDQMWGIDSGRMSKIVCTIGPKTCDLESIEKLAETGM
DIVRLNMSHGTHEWHKAVIDNVRQINAAGRFNLGILLDTKGPEVRSGDVK
APIKVKRGQRFVWTVRKDLDNFDESTVDVSYDDFINDVHVGDTLLVDGGM
CSFLCTEKTDTDVVSECIDGGTLTSRRHLNVRGKSASLPAITDKDWEDIK
FGMDMNVDFYALSFVKHEDDVARLKEYLSDNGCKALVLSKIESADAIHRL
PQILKASDGAMVARGDLGAEIPVEDVPLVQDEIVHINRTLRKPTIVATHM
LESMITYPTPTRAEVADITEAVRQGADATMLSGETANGSFPYKALSVMAT
VAKSVVSRDSAMSQNDLFSPMSPSPQDDGSKDTRRDLAYAASTLASRLNV
AAIVVFTRIGSYAKLVASTRPRCPIIALTPDSDLVRRLTLFWGVKPFELE
FSDDPEETIARAINLLLEKGHTSTGDNIVITSDMLVKDKNTVNTIQVRRV
R*
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spliced messenger RNA

>Ggra7004.t1 ID=Ggra7004.t1|Name=Ggra7004.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1656bp|location=Sequence derived from alignment at tig00000211_pilon:166452..168107+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGCATTCGCCGTTTCACCCTCACTACCTATTCATGGGCCCGGTAT
TGCTCGCTTCACCTCGTCCACTTTTGTGCAGCGTTCCGCGCCGCTGGTGC
GTTCAGCACGTACTCCCGCGAGATGGCGTGCCGTGGCTACTTCGAGAGGC
GAGGCAACCAGTCTGGGGTTTGCCAAGGATGCATACCATGATGATCAGAT
GTGGGGCATCGACTCTGGGCGCATGAGCAAAATTGTATGCACCATTGGTC
CTAAGACATGTGACTTGGAGAGCATAGAGAAGCTGGCGGAGACTGGAATG
GATATCGTGCGACTTAACATGAGTCACGGTACTCATGAATGGCATAAGGC
TGTCATCGATAACGTTCGACAGATAAATGCGGCGGGGCGCTTCAACCTTG
GTATCTTGCTGGACACCAAGGGCCCCGAGGTTAGGAGTGGTGACGTCAAG
GCCCCGATCAAGGTGAAGAGGGGGCAGCGGTTTGTTTGGACCGTCCGGAA
GGATTTGGATAATTTTGACGAGAGCACTGTTGATGTCAGTTACGACGACT
TCATCAACGACGTCCATGTTGGAGACACCTTGCTCGTTGATGGCGGAATG
TGTTCATTTCTGTGCACGGAGAAGACAGACACGGACGTCGTCTCGGAGTG
CATCGATGGTGGCACTTTAACCTCACGCCGCCATCTCAATGTGAGGGGCA
AGAGTGCATCCTTACCGGCCATCACAGACAAGGATTGGGAGGACATTAAA
TTTGGCATGGACATGAACGTTGATTTCTATGCGCTCAGCTTTGTTAAACA
TGAAGATGATGTCGCTCGTCTCAAGGAATATTTGTCGGACAATGGTTGCA
AGGCACTTGTCCTGTCTAAGATCGAGAGTGCAGATGCCATCCACCGACTT
CCTCAAATTCTAAAGGCCTCTGATGGAGCTATGGTCGCGCGTGGCGATTT
GGGGGCGGAGATCCCGGTTGAAGATGTGCCATTGGTTCAAGACGAGATTG
TCCACATTAACCGTACTCTGCGCAAACCAACGATCGTCGCTACACATATG
CTGGAGAGCATGATTACGTACCCTACACCCACGCGAGCTGAGGTTGCGGA
TATCACTGAAGCAGTGCGACAGGGCGCAGACGCTACCATGTTGAGTGGAG
AGACGGCGAACGGATCATTCCCATACAAAGCCTTGTCCGTGATGGCAACT
GTTGCAAAGAGTGTTGTCTCGCGGGACTCGGCCATGTCTCAAAATGATTT
GTTCTCGCCAATGTCACCGTCTCCTCAAGATGATGGATCGAAAGACACGC
GTCGAGATCTTGCATACGCGGCGTCAACTTTGGCATCCAGGTTGAATGTT
GCGGCAATCGTTGTGTTCACCAGGATTGGGAGCTACGCAAAACTGGTAGC
CTCAACTCGTCCCAGGTGTCCTATCATTGCTCTCACACCTGATAGTGATC
TAGTCAGACGGCTGACCTTATTCTGGGGCGTCAAACCATTTGAATTAGAG
TTTTCAGATGATCCGGAAGAAACTATTGCTCGGGCCATAAACCTGCTTCT
GGAAAAGGGCCATACTTCGACTGGTGACAACATTGTAATTACCAGCGATA
TGCTTGTGAAGGATAAGAATACGGTGAACACCATACAGGTGCGCAGAGTT
CGCTGA
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protein sequence of Ggra7004.t1

>Ggra7004.t1 ID=Ggra7004.t1|Name=Ggra7004.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=552bp
MSAFAVSPSLPIHGPGIARFTSSTFVQRSAPLVRSARTPARWRAVATSRG
EATSLGFAKDAYHDDQMWGIDSGRMSKIVCTIGPKTCDLESIEKLAETGM
DIVRLNMSHGTHEWHKAVIDNVRQINAAGRFNLGILLDTKGPEVRSGDVK
APIKVKRGQRFVWTVRKDLDNFDESTVDVSYDDFINDVHVGDTLLVDGGM
CSFLCTEKTDTDVVSECIDGGTLTSRRHLNVRGKSASLPAITDKDWEDIK
FGMDMNVDFYALSFVKHEDDVARLKEYLSDNGCKALVLSKIESADAIHRL
PQILKASDGAMVARGDLGAEIPVEDVPLVQDEIVHINRTLRKPTIVATHM
LESMITYPTPTRAEVADITEAVRQGADATMLSGETANGSFPYKALSVMAT
VAKSVVSRDSAMSQNDLFSPMSPSPQDDGSKDTRRDLAYAASTLASRLNV
AAIVVFTRIGSYAKLVASTRPRCPIIALTPDSDLVRRLTLFWGVKPFELE
FSDDPEETIARAINLLLEKGHTSTGDNIVITSDMLVKDKNTVNTIQVRRV
R*
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mRNA from alignment at tig00000211_pilon:166452..168107+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7004.t1 ID=Ggra7004.t1|Name=Ggra7004.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1656bp|location=Sequence derived from alignment at tig00000211_pilon:166452..168107+ (Gracilaria gracilis GNS1m male)
ATGAGCGCATTCGCCGTTTCACCCTCACTACCTATTCATGGGCCCGGTAT
TGCTCGCTTCACCTCGTCCACTTTTGTGCAGCGTTCCGCGCCGCTGGTGC
GTTCAGCACGTACTCCCGCGAGATGGCGTGCCGTGGCTACTTCGAGAGGC
GAGGCAACCAGTCTGGGGTTTGCCAAGGATGCATACCATGATGATCAGAT
GTGGGGCATCGACTCTGGGCGCATGAGCAAAATTGTATGCACCATTGGTC
CTAAGACATGTGACTTGGAGAGCATAGAGAAGCTGGCGGAGACTGGAATG
GATATCGTGCGACTTAACATGAGTCACGGTACTCATGAATGGCATAAGGC
TGTCATCGATAACGTTCGACAGATAAATGCGGCGGGGCGCTTCAACCTTG
GTATCTTGCTGGACACCAAGGGCCCCGAGGTTAGGAGTGGTGACGTCAAG
GCCCCGATCAAGGTGAAGAGGGGGCAGCGGTTTGTTTGGACCGTCCGGAA
GGATTTGGATAATTTTGACGAGAGCACTGTTGATGTCAGTTACGACGACT
TCATCAACGACGTCCATGTTGGAGACACCTTGCTCGTTGATGGCGGAATG
TGTTCATTTCTGTGCACGGAGAAGACAGACACGGACGTCGTCTCGGAGTG
CATCGATGGTGGCACTTTAACCTCACGCCGCCATCTCAATGTGAGGGGCA
AGAGTGCATCCTTACCGGCCATCACAGACAAGGATTGGGAGGACATTAAA
TTTGGCATGGACATGAACGTTGATTTCTATGCGCTCAGCTTTGTTAAACA
TGAAGATGATGTCGCTCGTCTCAAGGAATATTTGTCGGACAATGGTTGCA
AGGCACTTGTCCTGTCTAAGATCGAGAGTGCAGATGCCATCCACCGACTT
CCTCAAATTCTAAAGGCCTCTGATGGAGCTATGGTCGCGCGTGGCGATTT
GGGGGCGGAGATCCCGGTTGAAGATGTGCCATTGGTTCAAGACGAGATTG
TCCACATTAACCGTACTCTGCGCAAACCAACGATCGTCGCTACACATATG
CTGGAGAGCATGATTACGTACCCTACACCCACGCGAGCTGAGGTTGCGGA
TATCACTGAAGCAGTGCGACAGGGCGCAGACGCTACCATGTTGAGTGGAG
AGACGGCGAACGGATCATTCCCATACAAAGCCTTGTCCGTGATGGCAACT
GTTGCAAAGAGTGTTGTCTCGCGGGACTCGGCCATGTCTCAAAATGATTT
GTTCTCGCCAATGTCACCGTCTCCTCAAGATGATGGATCGAAAGACACGC
GTCGAGATCTTGCATACGCGGCGTCAACTTTGGCATCCAGGTTGAATGTT
GCGGCAATCGTTGTGTTCACCAGGATTGGGAGCTACGCAAAACTGGTAGC
CTCAACTCGTCCCAGGTGTCCTATCATTGCTCTCACACCTGATAGTGATC
TAGTCAGACGGCTGACCTTATTCTGGGGCGTCAAACCATTTGAATTAGAG
TTTTCAGATGATCCGGAAGAAACTATTGCTCGGGCCATAAACCTGCTTCT
GGAAAAGGGCCATACTTCGACTGGTGACAACATTGTAATTACCAGCGATA
TGCTTGTGAAGGATAAGAATACGGTGAACACCATACAGGTGCGCAGAGTT
CGCTGA
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Coding sequence (CDS) from alignment at tig00000211_pilon:166452..168107+

>Ggra7004.t1 ID=Ggra7004.t1|Name=Ggra7004.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1656bp|location=Sequence derived from alignment at tig00000211_pilon:166452..168107+ (Gracilaria gracilis GNS1m male)
ATGAGCGCATTCGCCGTTTCACCCTCACTACCTATTCATGGGCCCGGTAT
TGCTCGCTTCACCTCGTCCACTTTTGTGCAGCGTTCCGCGCCGCTGGTGC
GTTCAGCACGTACTCCCGCGAGATGGCGTGCCGTGGCTACTTCGAGAGGC
GAGGCAACCAGTCTGGGGTTTGCCAAGGATGCATACCATGATGATCAGAT
GTGGGGCATCGACTCTGGGCGCATGAGCAAAATTGTATGCACCATTGGTC
CTAAGACATGTGACTTGGAGAGCATAGAGAAGCTGGCGGAGACTGGAATG
GATATCGTGCGACTTAACATGAGTCACGGTACTCATGAATGGCATAAGGC
TGTCATCGATAACGTTCGACAGATAAATGCGGCGGGGCGCTTCAACCTTG
GTATCTTGCTGGACACCAAGGGCCCCGAGGTTAGGAGTGGTGACGTCAAG
GCCCCGATCAAGGTGAAGAGGGGGCAGCGGTTTGTTTGGACCGTCCGGAA
GGATTTGGATAATTTTGACGAGAGCACTGTTGATGTCAGTTACGACGACT
TCATCAACGACGTCCATGTTGGAGACACCTTGCTCGTTGATGGCGGAATG
TGTTCATTTCTGTGCACGGAGAAGACAGACACGGACGTCGTCTCGGAGTG
CATCGATGGTGGCACTTTAACCTCACGCCGCCATCTCAATGTGAGGGGCA
AGAGTGCATCCTTACCGGCCATCACAGACAAGGATTGGGAGGACATTAAA
TTTGGCATGGACATGAACGTTGATTTCTATGCGCTCAGCTTTGTTAAACA
TGAAGATGATGTCGCTCGTCTCAAGGAATATTTGTCGGACAATGGTTGCA
AGGCACTTGTCCTGTCTAAGATCGAGAGTGCAGATGCCATCCACCGACTT
CCTCAAATTCTAAAGGCCTCTGATGGAGCTATGGTCGCGCGTGGCGATTT
GGGGGCGGAGATCCCGGTTGAAGATGTGCCATTGGTTCAAGACGAGATTG
TCCACATTAACCGTACTCTGCGCAAACCAACGATCGTCGCTACACATATG
CTGGAGAGCATGATTACGTACCCTACACCCACGCGAGCTGAGGTTGCGGA
TATCACTGAAGCAGTGCGACAGGGCGCAGACGCTACCATGTTGAGTGGAG
AGACGGCGAACGGATCATTCCCATACAAAGCCTTGTCCGTGATGGCAACT
GTTGCAAAGAGTGTTGTCTCGCGGGACTCGGCCATGTCTCAAAATGATTT
GTTCTCGCCAATGTCACCGTCTCCTCAAGATGATGGATCGAAAGACACGC
GTCGAGATCTTGCATACGCGGCGTCAACTTTGGCATCCAGGTTGAATGTT
GCGGCAATCGTTGTGTTCACCAGGATTGGGAGCTACGCAAAACTGGTAGC
CTCAACTCGTCCCAGGTGTCCTATCATTGCTCTCACACCTGATAGTGATC
TAGTCAGACGGCTGACCTTATTCTGGGGCGTCAAACCATTTGAATTAGAG
TTTTCAGATGATCCGGAAGAAACTATTGCTCGGGCCATAAACCTGCTTCT
GGAAAAGGGCCATACTTCGACTGGTGACAACATTGTAATTACCAGCGATA
TGCTTGTGAAGGATAAGAATACGGTGAACACCATACAGGTGCGCAGAGTT
CGCTGA
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