Ggra6963.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6963.t1
Unique NameGgra6963.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length133
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000915_piloncontigtig00000915_pilon:27019..27417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6963Ggra6963Gracilaria gracilis GNS1m malegenetig00000915_pilon 27019..27417 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6963.t1.start1Ggra6963.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000915_pilon 27019..27021 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6963.t1.CDS1Ggra6963.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000915_pilon 27019..27417 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6963.t1.exon1Ggra6963.t1.exon1Gracilaria gracilis GNS1m maleexontig00000915_pilon 27019..27417 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6963.t1.stop1Ggra6963.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000915_pilon 27415..27417 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6963.t1Ggra6963.t1Gracilaria gracilis GNS1m malepolypeptidetig00000915_pilon 27019..27417 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6963.t1 ID=Ggra6963.t1|Name=Ggra6963.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=133bp
MLVGEPPHLRRGTFGCKRWLRQHEARFEQWQRAEGDQLTVCVEAPRALAL
WRQRYMNGVLSAVARQRKARALLLSGLPCDNARWDARDCRAVSEKTPLYR
DSNDVSEKGAVYMATKWKSDPRRWFPEGSRVP*
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spliced messenger RNA

>Ggra6963.t1 ID=Ggra6963.t1|Name=Ggra6963.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=399bp|location=Sequence derived from alignment at tig00000915_pilon:27019..27417+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGTGGGCGAGCCGCCCCACCTGAGGCGCGGCACGTTCGGCTGCAA
GCGCTGGCTGCGGCAGCATGAGGCGCGCTTCGAGCAGTGGCAGCGCGCGG
AGGGTGATCAGCTGACGGTGTGCGTGGAAGCGCCGCGCGCGCTGGCGCTG
TGGCGGCAGCGCTACATGAACGGCGTGCTCAGTGCCGTTGCCCGTCAGAG
GAAAGCGCGCGCGCTGCTGCTCAGCGGGCTGCCGTGCGACAATGCGCGGT
GGGACGCGCGCGACTGCCGCGCGGTGAGCGAGAAAACGCCGCTGTACCGC
GACAGCAACGACGTGAGCGAGAAGGGAGCGGTGTACATGGCGACCAAGTG
GAAGAGTGATCCGCGGAGGTGGTTTCCGGAGGGGTCGCGCGTGCCGTAG
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protein sequence of Ggra6963.t1

>Ggra6963.t1 ID=Ggra6963.t1|Name=Ggra6963.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bp
MLVGEPPHLRRGTFGCKRWLRQHEARFEQWQRAEGDQLTVCVEAPRALAL
WRQRYMNGVLSAVARQRKARALLLSGLPCDNARWDARDCRAVSEKTPLYR
DSNDVSEKGAVYMATKWKSDPRRWFPEGSRVP*
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mRNA from alignment at tig00000915_pilon:27019..27417+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6963.t1 ID=Ggra6963.t1|Name=Ggra6963.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=399bp|location=Sequence derived from alignment at tig00000915_pilon:27019..27417+ (Gracilaria gracilis GNS1m male)
ATGCTGGTGGGCGAGCCGCCCCACCTGAGGCGCGGCACGTTCGGCTGCAA
GCGCTGGCTGCGGCAGCATGAGGCGCGCTTCGAGCAGTGGCAGCGCGCGG
AGGGTGATCAGCTGACGGTGTGCGTGGAAGCGCCGCGCGCGCTGGCGCTG
TGGCGGCAGCGCTACATGAACGGCGTGCTCAGTGCCGTTGCCCGTCAGAG
GAAAGCGCGCGCGCTGCTGCTCAGCGGGCTGCCGTGCGACAATGCGCGGT
GGGACGCGCGCGACTGCCGCGCGGTGAGCGAGAAAACGCCGCTGTACCGC
GACAGCAACGACGTGAGCGAGAAGGGAGCGGTGTACATGGCGACCAAGTG
GAAGAGTGATCCGCGGAGGTGGTTTCCGGAGGGGTCGCGCGTGCCGTAG
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Coding sequence (CDS) from alignment at tig00000915_pilon:27019..27417+

>Ggra6963.t1 ID=Ggra6963.t1|Name=Ggra6963.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=399bp|location=Sequence derived from alignment at tig00000915_pilon:27019..27417+ (Gracilaria gracilis GNS1m male)
ATGCTGGTGGGCGAGCCGCCCCACCTGAGGCGCGGCACGTTCGGCTGCAA
GCGCTGGCTGCGGCAGCATGAGGCGCGCTTCGAGCAGTGGCAGCGCGCGG
AGGGTGATCAGCTGACGGTGTGCGTGGAAGCGCCGCGCGCGCTGGCGCTG
TGGCGGCAGCGCTACATGAACGGCGTGCTCAGTGCCGTTGCCCGTCAGAG
GAAAGCGCGCGCGCTGCTGCTCAGCGGGCTGCCGTGCGACAATGCGCGGT
GGGACGCGCGCGACTGCCGCGCGGTGAGCGAGAAAACGCCGCTGTACCGC
GACAGCAACGACGTGAGCGAGAAGGGAGCGGTGTACATGGCGACCAAGTG
GAAGAGTGATCCGCGGAGGTGGTTTCCGGAGGGGTCGCGCGTGCCGTAG
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