Ggra6917.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6917.t1
Unique NameGgra6917.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length354
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000144_piloncontigtig00000144_pilon:202235..203296 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6917Ggra6917Gracilaria gracilis GNS1m malegenetig00000144_pilon 202235..203296 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6917.t1.stop1Ggra6917.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000144_pilon 202235..202237 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6917.t1.CDS1Ggra6917.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000144_pilon 202235..203296 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6917.t1.exon1Ggra6917.t1.exon1Gracilaria gracilis GNS1m maleexontig00000144_pilon 202235..203296 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6917.t1.start1Ggra6917.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000144_pilon 203294..203296 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6917.t1Ggra6917.t1Gracilaria gracilis GNS1m malepolypeptidetig00000144_pilon 202235..203296 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6917.t1 ID=Ggra6917.t1|Name=Ggra6917.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=354bp
MGIVNYLVIDKRPSSISLRVTGRYQAKERPLPPCQRLVYPDPGRTLLQFA
IADSLCGVLCHCCRLAIFVGLLFMSAIFVFLTHSTLPGFPLAAQFFILIA
GLYSSISSFFWKQPVKHLRMDADEGMLICGPTGFSLSHVVAVNDSERLTA
SGKVSGRVTSVRKWSVLEIVSLYESIVIECELVSSDASEATRHVNAFLQH
WKLRTHDEVVLPSQTIEQFGVSSGSEKIGRQSTLLRDRPGYSLLYISEGE
EGSLCLYRPLLWRRDFRLPLRFFALGLLIWVICSSASQPYDWLRLETGLA
AGKLIAITSAWTVALVVVVALYFRREVWDMGRDEVVVHRFGWQGCYSRSW
YDI*
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spliced messenger RNA

>Ggra6917.t1 ID=Ggra6917.t1|Name=Ggra6917.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1062bp|location=Sequence derived from alignment at tig00000144_pilon:202235..203296- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTATTGTAAACTATCTGGTCATCGACAAGCGCCCTTCGTCAATCTC
TCTGCGCGTCACAGGCCGCTACCAAGCCAAGGAAAGGCCTTTGCCGCCTT
GTCAGCGCTTGGTGTACCCAGATCCAGGCCGTACTTTGCTCCAGTTTGCT
ATTGCTGATTCGCTGTGTGGAGTCCTTTGCCATTGTTGCAGATTGGCTAT
TTTCGTTGGGCTGCTGTTCATGTCGGCAATTTTTGTATTCCTCACGCACT
CTACCCTCCCTGGCTTTCCTTTGGCCGCTCAGTTTTTCATATTGATAGCT
GGACTGTACTCTTCGATAAGTTCATTTTTCTGGAAGCAGCCAGTAAAGCA
TCTTCGTATGGACGCAGACGAAGGCATGCTTATTTGTGGACCTACTGGAT
TTAGCCTTTCTCATGTTGTTGCTGTTAACGACTCCGAGAGACTTACGGCA
AGCGGCAAGGTCTCGGGTAGGGTGACATCTGTGCGCAAGTGGTCTGTGTT
GGAGATTGTCTCGCTTTATGAGTCGATCGTGATCGAATGCGAGCTAGTCT
CTTCGGATGCGAGTGAAGCAACGAGACATGTAAACGCTTTTCTGCAGCAC
TGGAAGCTTCGCACCCATGACGAGGTGGTTCTACCGAGCCAAACCATTGA
ACAGTTTGGCGTTTCAAGTGGCTCGGAGAAGATCGGACGCCAATCAACGC
TTCTTCGTGATCGTCCAGGGTACAGTTTGTTGTACATCAGCGAAGGGGAG
GAGGGATCACTTTGTTTGTATCGACCTCTATTATGGCGGCGCGACTTTCG
ACTTCCGTTGCGATTCTTCGCATTGGGATTGCTAATCTGGGTGATATGTT
CCTCAGCAAGCCAGCCTTACGATTGGCTGCGGTTGGAGACGGGACTGGCG
GCAGGAAAATTAATAGCGATTACTTCGGCATGGACCGTAGCGTTGGTGGT
TGTGGTTGCACTTTACTTTCGAAGAGAGGTGTGGGACATGGGGCGCGACG
AAGTGGTTGTTCATCGATTCGGATGGCAGGGGTGCTACTCACGCAGTTGG
TATGACATCTAG
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protein sequence of Ggra6917.t1

>Ggra6917.t1 ID=Ggra6917.t1|Name=Ggra6917.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=354bp
MGIVNYLVIDKRPSSISLRVTGRYQAKERPLPPCQRLVYPDPGRTLLQFA
IADSLCGVLCHCCRLAIFVGLLFMSAIFVFLTHSTLPGFPLAAQFFILIA
GLYSSISSFFWKQPVKHLRMDADEGMLICGPTGFSLSHVVAVNDSERLTA
SGKVSGRVTSVRKWSVLEIVSLYESIVIECELVSSDASEATRHVNAFLQH
WKLRTHDEVVLPSQTIEQFGVSSGSEKIGRQSTLLRDRPGYSLLYISEGE
EGSLCLYRPLLWRRDFRLPLRFFALGLLIWVICSSASQPYDWLRLETGLA
AGKLIAITSAWTVALVVVVALYFRREVWDMGRDEVVVHRFGWQGCYSRSW
YDI*
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mRNA from alignment at tig00000144_pilon:202235..203296-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6917.t1 ID=Ggra6917.t1|Name=Ggra6917.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1062bp|location=Sequence derived from alignment at tig00000144_pilon:202235..203296- (Gracilaria gracilis GNS1m male)
ATGGGTATTGTAAACTATCTGGTCATCGACAAGCGCCCTTCGTCAATCTC
TCTGCGCGTCACAGGCCGCTACCAAGCCAAGGAAAGGCCTTTGCCGCCTT
GTCAGCGCTTGGTGTACCCAGATCCAGGCCGTACTTTGCTCCAGTTTGCT
ATTGCTGATTCGCTGTGTGGAGTCCTTTGCCATTGTTGCAGATTGGCTAT
TTTCGTTGGGCTGCTGTTCATGTCGGCAATTTTTGTATTCCTCACGCACT
CTACCCTCCCTGGCTTTCCTTTGGCCGCTCAGTTTTTCATATTGATAGCT
GGACTGTACTCTTCGATAAGTTCATTTTTCTGGAAGCAGCCAGTAAAGCA
TCTTCGTATGGACGCAGACGAAGGCATGCTTATTTGTGGACCTACTGGAT
TTAGCCTTTCTCATGTTGTTGCTGTTAACGACTCCGAGAGACTTACGGCA
AGCGGCAAGGTCTCGGGTAGGGTGACATCTGTGCGCAAGTGGTCTGTGTT
GGAGATTGTCTCGCTTTATGAGTCGATCGTGATCGAATGCGAGCTAGTCT
CTTCGGATGCGAGTGAAGCAACGAGACATGTAAACGCTTTTCTGCAGCAC
TGGAAGCTTCGCACCCATGACGAGGTGGTTCTACCGAGCCAAACCATTGA
ACAGTTTGGCGTTTCAAGTGGCTCGGAGAAGATCGGACGCCAATCAACGC
TTCTTCGTGATCGTCCAGGGTACAGTTTGTTGTACATCAGCGAAGGGGAG
GAGGGATCACTTTGTTTGTATCGACCTCTATTATGGCGGCGCGACTTTCG
ACTTCCGTTGCGATTCTTCGCATTGGGATTGCTAATCTGGGTGATATGTT
CCTCAGCAAGCCAGCCTTACGATTGGCTGCGGTTGGAGACGGGACTGGCG
GCAGGAAAATTAATAGCGATTACTTCGGCATGGACCGTAGCGTTGGTGGT
TGTGGTTGCACTTTACTTTCGAAGAGAGGTGTGGGACATGGGGCGCGACG
AAGTGGTTGTTCATCGATTCGGATGGCAGGGGTGCTACTCACGCAGTTGG
TATGACATCTAG
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Coding sequence (CDS) from alignment at tig00000144_pilon:202235..203296-

>Ggra6917.t1 ID=Ggra6917.t1|Name=Ggra6917.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1062bp|location=Sequence derived from alignment at tig00000144_pilon:202235..203296- (Gracilaria gracilis GNS1m male)
ATGGGTATTGTAAACTATCTGGTCATCGACAAGCGCCCTTCGTCAATCTC
TCTGCGCGTCACAGGCCGCTACCAAGCCAAGGAAAGGCCTTTGCCGCCTT
GTCAGCGCTTGGTGTACCCAGATCCAGGCCGTACTTTGCTCCAGTTTGCT
ATTGCTGATTCGCTGTGTGGAGTCCTTTGCCATTGTTGCAGATTGGCTAT
TTTCGTTGGGCTGCTGTTCATGTCGGCAATTTTTGTATTCCTCACGCACT
CTACCCTCCCTGGCTTTCCTTTGGCCGCTCAGTTTTTCATATTGATAGCT
GGACTGTACTCTTCGATAAGTTCATTTTTCTGGAAGCAGCCAGTAAAGCA
TCTTCGTATGGACGCAGACGAAGGCATGCTTATTTGTGGACCTACTGGAT
TTAGCCTTTCTCATGTTGTTGCTGTTAACGACTCCGAGAGACTTACGGCA
AGCGGCAAGGTCTCGGGTAGGGTGACATCTGTGCGCAAGTGGTCTGTGTT
GGAGATTGTCTCGCTTTATGAGTCGATCGTGATCGAATGCGAGCTAGTCT
CTTCGGATGCGAGTGAAGCAACGAGACATGTAAACGCTTTTCTGCAGCAC
TGGAAGCTTCGCACCCATGACGAGGTGGTTCTACCGAGCCAAACCATTGA
ACAGTTTGGCGTTTCAAGTGGCTCGGAGAAGATCGGACGCCAATCAACGC
TTCTTCGTGATCGTCCAGGGTACAGTTTGTTGTACATCAGCGAAGGGGAG
GAGGGATCACTTTGTTTGTATCGACCTCTATTATGGCGGCGCGACTTTCG
ACTTCCGTTGCGATTCTTCGCATTGGGATTGCTAATCTGGGTGATATGTT
CCTCAGCAAGCCAGCCTTACGATTGGCTGCGGTTGGAGACGGGACTGGCG
GCAGGAAAATTAATAGCGATTACTTCGGCATGGACCGTAGCGTTGGTGGT
TGTGGTTGCACTTTACTTTCGAAGAGAGGTGTGGGACATGGGGCGCGACG
AAGTGGTTGTTCATCGATTCGGATGGCAGGGGTGCTACTCACGCAGTTGG
TATGACATCTAG
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