Ggra6766.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6766.t1
Unique NameGgra6766.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length337
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:457722..458732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005708105.1
PFAMsSpoIIE
Max annot lvl2759|Eukaryota
KEGG koko:K17508
Evalue3.55e-49
EggNOG OGsCOG0631@1|root,KOG1379@2759|Eukaryota
EC3.1.3.16
Descriptionphosphoprotein phosphatase activity
COG categoryT
BRITEko00000,ko01000,ko01009
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6766Ggra6766Gracilaria gracilis GNS1m malegenetig00000056_pilon 457722..458732 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6766.t1.stop1Ggra6766.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 457722..457724 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6766.t1.CDS1Ggra6766.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 457722..458732 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6766.t1.exon1Ggra6766.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 457722..458732 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6766.t1.start1Ggra6766.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 458730..458732 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6766.t1Ggra6766.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 457722..458732 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6766.t1 ID=Ggra6766.t1|Name=Ggra6766.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=337bp
MQQQQQQAANARQQAAAAFTAPLPLRARSQRGALHSRLFTAPPRAPRATR
RAAAGGARMLFNLWSSKAPEAAQRYNWSIGYSYLAHPEKNTGEDAFFVEG
NCIGVFDGVSGAFETRGVDPRLYSQTLAAATRELVRELGPANVVRAAYQA
AAQNEQIGASTACVVGMDRYTRLFGINLGDSGVRIVRGEKLLFRTKEQQH
YFNCPYQLGTDSDDALAMGQNVQRKLSEGDWVIVATDGLFDNVSDADIVR
EAARAEDAATLADTLGELAAARAVDATFRSPFMAAATAAGVAWQGGKADD
ITVVVARVEDAPAAPSTSLLSTLPEAQPEAQPEAQR*
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spliced messenger RNA

>Ggra6766.t1 ID=Ggra6766.t1|Name=Ggra6766.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1011bp|location=Sequence derived from alignment at tig00000056_pilon:457722..458732- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCAACAACAGCAACAAGCAGCAAACGCGCGCCAGCAAGCGGCGGC
GGCGTTCACCGCGCCGCTGCCGCTGCGCGCGCGCTCGCAGCGCGGCGCGC
TGCACAGCCGGCTGTTCACCGCGCCGCCGCGCGCACCACGCGCAACAAGG
CGCGCAGCGGCCGGCGGCGCGCGCATGCTATTCAACCTATGGTCGTCCAA
GGCGCCAGAGGCAGCGCAGCGCTACAACTGGTCCATCGGCTACAGCTACC
TAGCGCACCCGGAGAAGAACACGGGCGAAGACGCGTTCTTCGTGGAGGGC
AACTGCATCGGAGTGTTCGACGGCGTGTCCGGCGCGTTCGAGACGCGCGG
CGTGGACCCGCGTCTGTACAGCCAGACGCTGGCGGCCGCCACGCGCGAGC
TGGTGCGCGAGCTGGGGCCGGCCAACGTGGTGCGCGCCGCGTACCAGGCC
GCGGCGCAAAACGAGCAGATCGGCGCGTCCACGGCGTGCGTGGTGGGCAT
GGACCGCTACACGCGGCTGTTCGGCATCAACCTGGGCGACTCTGGCGTGC
GCATCGTGCGCGGCGAAAAGCTGCTGTTCCGCACCAAGGAGCAGCAGCAC
TACTTCAACTGCCCGTACCAGCTGGGCACGGACAGCGACGACGCGCTGGC
CATGGGGCAGAACGTGCAGCGCAAGCTGTCGGAGGGCGACTGGGTGATCG
TAGCCACGGACGGGCTGTTCGACAACGTGAGCGACGCTGACATTGTGCGC
GAGGCGGCGCGCGCCGAGGACGCCGCCACGCTGGCGGACACGCTGGGCGA
GCTGGCGGCGGCGCGCGCGGTGGACGCCACCTTCCGCAGCCCGTTCATGG
CGGCGGCAACGGCGGCGGGCGTGGCGTGGCAGGGCGGCAAGGCCGACGAC
ATCACCGTGGTGGTGGCGCGCGTGGAGGACGCGCCCGCCGCGCCGAGCAC
GTCGCTGCTGTCCACGCTGCCCGAGGCGCAGCCCGAAGCGCAGCCCGAGG
CGCAGCGCTGA
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protein sequence of Ggra6766.t1

>Ggra6766.t1 ID=Ggra6766.t1|Name=Ggra6766.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=337bp
MQQQQQQAANARQQAAAAFTAPLPLRARSQRGALHSRLFTAPPRAPRATR
RAAAGGARMLFNLWSSKAPEAAQRYNWSIGYSYLAHPEKNTGEDAFFVEG
NCIGVFDGVSGAFETRGVDPRLYSQTLAAATRELVRELGPANVVRAAYQA
AAQNEQIGASTACVVGMDRYTRLFGINLGDSGVRIVRGEKLLFRTKEQQH
YFNCPYQLGTDSDDALAMGQNVQRKLSEGDWVIVATDGLFDNVSDADIVR
EAARAEDAATLADTLGELAAARAVDATFRSPFMAAATAAGVAWQGGKADD
ITVVVARVEDAPAAPSTSLLSTLPEAQPEAQPEAQR*
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mRNA from alignment at tig00000056_pilon:457722..458732-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6766.t1 ID=Ggra6766.t1|Name=Ggra6766.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1011bp|location=Sequence derived from alignment at tig00000056_pilon:457722..458732- (Gracilaria gracilis GNS1m male)
ATGCAGCAACAACAGCAACAAGCAGCAAACGCGCGCCAGCAAGCGGCGGC
GGCGTTCACCGCGCCGCTGCCGCTGCGCGCGCGCTCGCAGCGCGGCGCGC
TGCACAGCCGGCTGTTCACCGCGCCGCCGCGCGCACCACGCGCAACAAGG
CGCGCAGCGGCCGGCGGCGCGCGCATGCTATTCAACCTATGGTCGTCCAA
GGCGCCAGAGGCAGCGCAGCGCTACAACTGGTCCATCGGCTACAGCTACC
TAGCGCACCCGGAGAAGAACACGGGCGAAGACGCGTTCTTCGTGGAGGGC
AACTGCATCGGAGTGTTCGACGGCGTGTCCGGCGCGTTCGAGACGCGCGG
CGTGGACCCGCGTCTGTACAGCCAGACGCTGGCGGCCGCCACGCGCGAGC
TGGTGCGCGAGCTGGGGCCGGCCAACGTGGTGCGCGCCGCGTACCAGGCC
GCGGCGCAAAACGAGCAGATCGGCGCGTCCACGGCGTGCGTGGTGGGCAT
GGACCGCTACACGCGGCTGTTCGGCATCAACCTGGGCGACTCTGGCGTGC
GCATCGTGCGCGGCGAAAAGCTGCTGTTCCGCACCAAGGAGCAGCAGCAC
TACTTCAACTGCCCGTACCAGCTGGGCACGGACAGCGACGACGCGCTGGC
CATGGGGCAGAACGTGCAGCGCAAGCTGTCGGAGGGCGACTGGGTGATCG
TAGCCACGGACGGGCTGTTCGACAACGTGAGCGACGCTGACATTGTGCGC
GAGGCGGCGCGCGCCGAGGACGCCGCCACGCTGGCGGACACGCTGGGCGA
GCTGGCGGCGGCGCGCGCGGTGGACGCCACCTTCCGCAGCCCGTTCATGG
CGGCGGCAACGGCGGCGGGCGTGGCGTGGCAGGGCGGCAAGGCCGACGAC
ATCACCGTGGTGGTGGCGCGCGTGGAGGACGCGCCCGCCGCGCCGAGCAC
GTCGCTGCTGTCCACGCTGCCCGAGGCGCAGCCCGAAGCGCAGCCCGAGG
CGCAGCGCTGA
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Coding sequence (CDS) from alignment at tig00000056_pilon:457722..458732-

>Ggra6766.t1 ID=Ggra6766.t1|Name=Ggra6766.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1011bp|location=Sequence derived from alignment at tig00000056_pilon:457722..458732- (Gracilaria gracilis GNS1m male)
ATGCAGCAACAACAGCAACAAGCAGCAAACGCGCGCCAGCAAGCGGCGGC
GGCGTTCACCGCGCCGCTGCCGCTGCGCGCGCGCTCGCAGCGCGGCGCGC
TGCACAGCCGGCTGTTCACCGCGCCGCCGCGCGCACCACGCGCAACAAGG
CGCGCAGCGGCCGGCGGCGCGCGCATGCTATTCAACCTATGGTCGTCCAA
GGCGCCAGAGGCAGCGCAGCGCTACAACTGGTCCATCGGCTACAGCTACC
TAGCGCACCCGGAGAAGAACACGGGCGAAGACGCGTTCTTCGTGGAGGGC
AACTGCATCGGAGTGTTCGACGGCGTGTCCGGCGCGTTCGAGACGCGCGG
CGTGGACCCGCGTCTGTACAGCCAGACGCTGGCGGCCGCCACGCGCGAGC
TGGTGCGCGAGCTGGGGCCGGCCAACGTGGTGCGCGCCGCGTACCAGGCC
GCGGCGCAAAACGAGCAGATCGGCGCGTCCACGGCGTGCGTGGTGGGCAT
GGACCGCTACACGCGGCTGTTCGGCATCAACCTGGGCGACTCTGGCGTGC
GCATCGTGCGCGGCGAAAAGCTGCTGTTCCGCACCAAGGAGCAGCAGCAC
TACTTCAACTGCCCGTACCAGCTGGGCACGGACAGCGACGACGCGCTGGC
CATGGGGCAGAACGTGCAGCGCAAGCTGTCGGAGGGCGACTGGGTGATCG
TAGCCACGGACGGGCTGTTCGACAACGTGAGCGACGCTGACATTGTGCGC
GAGGCGGCGCGCGCCGAGGACGCCGCCACGCTGGCGGACACGCTGGGCGA
GCTGGCGGCGGCGCGCGCGGTGGACGCCACCTTCCGCAGCCCGTTCATGG
CGGCGGCAACGGCGGCGGGCGTGGCGTGGCAGGGCGGCAAGGCCGACGAC
ATCACCGTGGTGGTGGCGCGCGTGGAGGACGCGCCCGCCGCGCCGAGCAC
GTCGCTGCTGTCCACGCTGCCCGAGGCGCAGCCCGAAGCGCAGCCCGAGG
CGCAGCGCTGA
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