Ggra6752.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6752.t1
Unique NameGgra6752.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length117
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:362847..363428 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6752Ggra6752Gracilaria gracilis GNS1m malegenetig00000056_pilon 362847..363428 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6752.t1Ggra6752.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 362847..363428 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6752.t1.stop1Ggra6752.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 362847..362849 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6752.t1.CDS1Ggra6752.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 362847..363090 -
Ggra6752.t1.CDS2Ggra6752.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000056_pilon 363322..363428 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6752.t1.exon1Ggra6752.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 362847..363090 -
Ggra6752.t1.exon2Ggra6752.t1.exon2Gracilaria gracilis GNS1m maleexontig00000056_pilon 363322..363428 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6752.t1.intron1Ggra6752.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000056_pilon 363091..363321 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6752.t1.start1Ggra6752.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 363426..363428 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6752.t1 ID=Ggra6752.t1|Name=Ggra6752.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=117bp
MAPRSRLPKLSENSTAVQRLRYLLESGELNGDESPKSFDDVEDLDDEIYE
GDEEDINEVDHFNKVFNPIYAFSEWEETNTAIKRLSVAIVLQTGVDNDCF
TLHVVPSGRVLVMRCR*
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spliced messenger RNA

>Ggra6752.t1 ID=Ggra6752.t1|Name=Ggra6752.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=351bp|location=Sequence derived from alignment at tig00000056_pilon:362847..363428- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCCCAGAAGCCGACTTCCCAAGCTCTCCGAGAATTCAACCGCCGT
CCAACGTCTACGTTACTTGCTGGAATCGGGAGAGCTCAATGGTGATGAAT
CTCCAAAAAGCTTTGACGATGTAGAGGATTTGGACGATGAAATCTATGAA
GGTGATGAAGAGGACATTAATGAGGTTGATCATTTCAATAAGGTTTTTAA
TCCAATATACGCTTTCTCAGAATGGGAAGAAACAAATACTGCTATCAAAA
GATTATCTGTTGCAATTGTATTGCAAACTGGAGTTGATAATGATTGTTTT
ACTTTACATGTAGTTCCGTCTGGTCGGGTGCTTGTCATGCGGTGTCGGTG
A
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protein sequence of Ggra6752.t1

>Ggra6752.t1 ID=Ggra6752.t1|Name=Ggra6752.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=117bp
MAPRSRLPKLSENSTAVQRLRYLLESGELNGDESPKSFDDVEDLDDEIYE
GDEEDINEVDHFNKVFNPIYAFSEWEETNTAIKRLSVAIVLQTGVDNDCF
TLHVVPSGRVLVMRCR*
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mRNA from alignment at tig00000056_pilon:362847..363428-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6752.t1 ID=Ggra6752.t1|Name=Ggra6752.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000056_pilon:362847..363428- (Gracilaria gracilis GNS1m male)
ATGGCTCCCAGAAGCCGACTTCCCAAGCTCTCCGAGAATTCAACCGCCGT
CCAACGTCTACGTTACTTGCTGGAATCGGGAGAGCTCAATGGTGATGAAT
CTCCAAAGTACGTGCATCCGCTCGAGGCTCTCTTTACGCTGTACAAGTTG
GCCAATTTCAGGAACGCATATAATCGCGTTAGGCGTTCATTGAATCTGCC
AAAAGGTAATGTGTCAATTTATTTTACAATATAGAGCGATCATGCTAACC
TTTCCGTAGAACCCGAAAATGCGAAGGGGAGTACTGAGGTAAATCCAAGG
TGTTCAAATGTTGACGCGAATTTGACGCCAACGAAAAGAAGCTTTGACGA
TGTAGAGGATTTGGACGATGAAATCTATGAAGGTGATGAAGAGGACATTA
ATGAGGTTGATCATTTCAATAAGGTTTTTAATCCAATATACGCTTTCTCA
GAATGGGAAGAAACAAATACTGCTATCAAAAGATTATCTGTTGCAATTGT
ATTGCAAACTGGAGTTGATAATGATTGTTTTACTTTACATGTAGTTCCGT
CTGGTCGGGTGCTTGTCATGCGGTGTCGGTGA
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Coding sequence (CDS) from alignment at tig00000056_pilon:362847..363428-

>Ggra6752.t1 ID=Ggra6752.t1|Name=Ggra6752.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=351bp|location=Sequence derived from alignment at tig00000056_pilon:362847..363428- (Gracilaria gracilis GNS1m male)
ATGGCTCCCAGAAGCCGACTTCCCAAGCTCTCCGAGAATTCAACCGCCGT
CCAACGTCTACGTTACTTGCTGGAATCGGGAGAGCTCAATGGTGATGAAT
CTCCAAAAAGCTTTGACGATGTAGAGGATTTGGACGATGAAATCTATGAA
GGTGATGAAGAGGACATTAATGAGGTTGATCATTTCAATAAGGTTTTTAA
TCCAATATACGCTTTCTCAGAATGGGAAGAAACAAATACTGCTATCAAAA
GATTATCTGTTGCAATTGTATTGCAAACTGGAGTTGATAATGATTGTTTT
ACTTTACATGTAGTTCCGTCTGGTCGGGTGCTTGTCATGCGGTGTCGGTG
A
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