Ggra6702.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6702.t1
Unique NameGgra6702.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length132
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:241272..241667 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6702Ggra6702Gracilaria gracilis GNS1m malegenetig00000056_pilon 241272..241667 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6702.t1.start1Ggra6702.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 241272..241274 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6702.t1.CDS1Ggra6702.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 241272..241667 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6702.t1.exon1Ggra6702.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 241272..241667 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6702.t1.stop1Ggra6702.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 241665..241667 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6702.t1Ggra6702.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 241272..241667 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6702.t1 ID=Ggra6702.t1|Name=Ggra6702.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=132bp
MNQELRVYRPTASNFAFIDFATTGTTWYNAKSIGKYTQTVKSDEDGARKF
LENREKFMTDKCSSGGVTNIPKLDKVVVTVVTNSDAEPRPYGSSARALKF
FGKPVNVTVVNVSELSAVQLLNPTDRTKELL*
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spliced messenger RNA

>Ggra6702.t1 ID=Ggra6702.t1|Name=Ggra6702.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=396bp|location=Sequence derived from alignment at tig00000056_pilon:241272..241667+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACCAAGAGCTGCGAGTGTATCGTCCTACTGCAAGTAACTTTGCGTT
TATTGACTTCGCAACTACCGGTACGACGTGGTACAACGCCAAGTCAATTG
GGAAGTACACCCAAACGGTGAAAAGTGACGAAGACGGAGCGAGGAAGTTC
CTGGAAAACCGGGAAAAGTTCATGACCGATAAATGTTCGTCTGGTGGCGT
TACTAACATTCCAAAGCTTGACAAGGTCGTGGTTACCGTCGTTACCAATA
GCGATGCGGAGCCAAGGCCCTATGGCTCATCAGCGAGGGCGTTGAAATTC
TTCGGCAAACCTGTTAACGTGACAGTTGTGAACGTATCAGAGTTGTCGGC
AGTTCAACTATTGAATCCCACTGATCGAACGAAAGAACTCCTTTAA
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protein sequence of Ggra6702.t1

>Ggra6702.t1 ID=Ggra6702.t1|Name=Ggra6702.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=132bp
MNQELRVYRPTASNFAFIDFATTGTTWYNAKSIGKYTQTVKSDEDGARKF
LENREKFMTDKCSSGGVTNIPKLDKVVVTVVTNSDAEPRPYGSSARALKF
FGKPVNVTVVNVSELSAVQLLNPTDRTKELL*
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mRNA from alignment at tig00000056_pilon:241272..241667+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6702.t1 ID=Ggra6702.t1|Name=Ggra6702.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=396bp|location=Sequence derived from alignment at tig00000056_pilon:241272..241667+ (Gracilaria gracilis GNS1m male)
ATGAACCAAGAGCTGCGAGTGTATCGTCCTACTGCAAGTAACTTTGCGTT
TATTGACTTCGCAACTACCGGTACGACGTGGTACAACGCCAAGTCAATTG
GGAAGTACACCCAAACGGTGAAAAGTGACGAAGACGGAGCGAGGAAGTTC
CTGGAAAACCGGGAAAAGTTCATGACCGATAAATGTTCGTCTGGTGGCGT
TACTAACATTCCAAAGCTTGACAAGGTCGTGGTTACCGTCGTTACCAATA
GCGATGCGGAGCCAAGGCCCTATGGCTCATCAGCGAGGGCGTTGAAATTC
TTCGGCAAACCTGTTAACGTGACAGTTGTGAACGTATCAGAGTTGTCGGC
AGTTCAACTATTGAATCCCACTGATCGAACGAAAGAACTCCTTTAA
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Coding sequence (CDS) from alignment at tig00000056_pilon:241272..241667+

>Ggra6702.t1 ID=Ggra6702.t1|Name=Ggra6702.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=396bp|location=Sequence derived from alignment at tig00000056_pilon:241272..241667+ (Gracilaria gracilis GNS1m male)
ATGAACCAAGAGCTGCGAGTGTATCGTCCTACTGCAAGTAACTTTGCGTT
TATTGACTTCGCAACTACCGGTACGACGTGGTACAACGCCAAGTCAATTG
GGAAGTACACCCAAACGGTGAAAAGTGACGAAGACGGAGCGAGGAAGTTC
CTGGAAAACCGGGAAAAGTTCATGACCGATAAATGTTCGTCTGGTGGCGT
TACTAACATTCCAAAGCTTGACAAGGTCGTGGTTACCGTCGTTACCAATA
GCGATGCGGAGCCAAGGCCCTATGGCTCATCAGCGAGGGCGTTGAAATTC
TTCGGCAAACCTGTTAACGTGACAGTTGTGAACGTATCAGAGTTGTCGGC
AGTTCAACTATTGAATCCCACTGATCGAACGAAAGAACTCCTTTAA
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