Ggra6630.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6630.t1
Unique NameGgra6630.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length138
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000859_piloncontigtig00000859_pilon:231472..231885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6630Ggra6630Gracilaria gracilis GNS1m malegenetig00000859_pilon 231472..231885 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6630.t1.stop1Ggra6630.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000859_pilon 231472..231474 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6630.t1.CDS1Ggra6630.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000859_pilon 231472..231885 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6630.t1.exon1Ggra6630.t1.exon1Gracilaria gracilis GNS1m maleexontig00000859_pilon 231472..231885 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6630.t1.start1Ggra6630.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000859_pilon 231883..231885 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6630.t1Ggra6630.t1Gracilaria gracilis GNS1m malepolypeptidetig00000859_pilon 231472..231885 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6630.t1 ID=Ggra6630.t1|Name=Ggra6630.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=138bp
MWYADGPNHMVLPNCTLFVLTRSDGTGQLEILSAPKLQKVDIGCCYEMCR
FRIWDINKRITEKDVKSLNGKRNQSLDRASEVWKRFKDSLEQRPQPYDLS
SLPECTVSHFNVDLEEDSIAEAEGTRVHLTKEQVLFR*
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spliced messenger RNA

>Ggra6630.t1 ID=Ggra6630.t1|Name=Ggra6630.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=414bp|location=Sequence derived from alignment at tig00000859_pilon:231472..231885- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGTATGCGGACGGCCCCAATCACATGGTGTTACCGAATTGTACGTT
GTTTGTCTTGACGCGGTCAGACGGGACGGGGCAGCTTGAGATTCTGTCTG
CGCCCAAGCTGCAGAAGGTGGATATTGGCTGTTGTTATGAAATGTGTCGT
TTTAGGATCTGGGATATTAACAAACGCATCACGGAGAAAGATGTGAAAAG
CTTGAATGGGAAGAGGAACCAGAGCCTGGATCGTGCGTCGGAGGTTTGGA
AACGCTTCAAGGACTCCCTGGAGCAGCGCCCACAGCCATACGATTTGTCG
TCTTTACCAGAATGTACAGTGTCCCATTTCAATGTGGATTTGGAAGAGGA
CTCAATTGCGGAGGCTGAAGGTACCAGAGTTCATCTTACGAAGGAACAAG
TTCTATTTCGCTAA
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protein sequence of Ggra6630.t1

>Ggra6630.t1 ID=Ggra6630.t1|Name=Ggra6630.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=138bp
MWYADGPNHMVLPNCTLFVLTRSDGTGQLEILSAPKLQKVDIGCCYEMCR
FRIWDINKRITEKDVKSLNGKRNQSLDRASEVWKRFKDSLEQRPQPYDLS
SLPECTVSHFNVDLEEDSIAEAEGTRVHLTKEQVLFR*
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mRNA from alignment at tig00000859_pilon:231472..231885-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6630.t1 ID=Ggra6630.t1|Name=Ggra6630.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=414bp|location=Sequence derived from alignment at tig00000859_pilon:231472..231885- (Gracilaria gracilis GNS1m male)
ATGTGGTATGCGGACGGCCCCAATCACATGGTGTTACCGAATTGTACGTT
GTTTGTCTTGACGCGGTCAGACGGGACGGGGCAGCTTGAGATTCTGTCTG
CGCCCAAGCTGCAGAAGGTGGATATTGGCTGTTGTTATGAAATGTGTCGT
TTTAGGATCTGGGATATTAACAAACGCATCACGGAGAAAGATGTGAAAAG
CTTGAATGGGAAGAGGAACCAGAGCCTGGATCGTGCGTCGGAGGTTTGGA
AACGCTTCAAGGACTCCCTGGAGCAGCGCCCACAGCCATACGATTTGTCG
TCTTTACCAGAATGTACAGTGTCCCATTTCAATGTGGATTTGGAAGAGGA
CTCAATTGCGGAGGCTGAAGGTACCAGAGTTCATCTTACGAAGGAACAAG
TTCTATTTCGCTAA
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Coding sequence (CDS) from alignment at tig00000859_pilon:231472..231885-

>Ggra6630.t1 ID=Ggra6630.t1|Name=Ggra6630.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=414bp|location=Sequence derived from alignment at tig00000859_pilon:231472..231885- (Gracilaria gracilis GNS1m male)
ATGTGGTATGCGGACGGCCCCAATCACATGGTGTTACCGAATTGTACGTT
GTTTGTCTTGACGCGGTCAGACGGGACGGGGCAGCTTGAGATTCTGTCTG
CGCCCAAGCTGCAGAAGGTGGATATTGGCTGTTGTTATGAAATGTGTCGT
TTTAGGATCTGGGATATTAACAAACGCATCACGGAGAAAGATGTGAAAAG
CTTGAATGGGAAGAGGAACCAGAGCCTGGATCGTGCGTCGGAGGTTTGGA
AACGCTTCAAGGACTCCCTGGAGCAGCGCCCACAGCCATACGATTTGTCG
TCTTTACCAGAATGTACAGTGTCCCATTTCAATGTGGATTTGGAAGAGGA
CTCAATTGCGGAGGCTGAAGGTACCAGAGTTCATCTTACGAAGGAACAAG
TTCTATTTCGCTAA
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