Ggra6616.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6616.t1
Unique NameGgra6616.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:642467..643102 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6616Ggra6616Gracilaria gracilis GNS1m malegenetig00000081_pilon 642467..643102 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6616.t1.stop1Ggra6616.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000081_pilon 642467..642469 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6616.t1.CDS1Ggra6616.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000081_pilon 642467..643102 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6616.t1.exon1Ggra6616.t1.exon1Gracilaria gracilis GNS1m maleexontig00000081_pilon 642467..643102 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6616.t1.start1Ggra6616.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000081_pilon 643100..643102 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6616.t1Ggra6616.t1Gracilaria gracilis GNS1m malepolypeptidetig00000081_pilon 642467..643102 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6616.t1 ID=Ggra6616.t1|Name=Ggra6616.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=212bp
MAIQRPSALRTDRRTLLAQRAALLSRAVAPRVHTTGATDDAPRAVARGNA
TLLLPNGAPHVAFLAQLNGWRARRGRAPLARDARLEEEAQWYTTRFADGA
GFVTARRRTCRMYERVDDFFVVGADDASDAPPTAARGADALPRDCTLLAA
LGMDAVLTRFRRKLRARERRLLDARFAFGGAHVQLAQRRVHICVLMAAPL
DDHAQSAARCS*
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spliced messenger RNA

>Ggra6616.t1 ID=Ggra6616.t1|Name=Ggra6616.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=636bp|location=Sequence derived from alignment at tig00000081_pilon:642467..643102- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCATCCAACGGCCGAGCGCGCTACGCACCGACCGTCGCACGCTGCT
TGCGCAGCGCGCCGCGCTGCTGTCGCGCGCCGTCGCGCCGCGCGTGCACA
CCACGGGCGCCACGGACGACGCGCCGCGCGCCGTCGCGCGCGGAAACGCC
ACGCTGTTGCTGCCGAACGGCGCGCCGCACGTCGCGTTCCTGGCGCAGCT
CAACGGCTGGCGCGCGCGCCGCGGCCGCGCGCCGCTCGCGCGCGACGCGC
GACTGGAGGAGGAGGCGCAGTGGTACACCACGCGCTTCGCGGACGGCGCG
GGCTTTGTCACCGCGCGGCGACGTACTTGTCGCATGTACGAGCGCGTGGA
TGACTTCTTCGTGGTGGGCGCGGACGACGCGTCGGACGCGCCGCCCACGG
CCGCGCGCGGCGCGGACGCGCTGCCGCGCGACTGCACGCTGCTGGCGGCG
CTGGGCATGGACGCCGTGCTGACGCGCTTCCGCCGCAAGCTGCGCGCGCG
CGAGCGGCGCCTGCTGGACGCGCGCTTTGCGTTCGGCGGCGCGCATGTGC
AGCTGGCGCAGAGGCGCGTGCACATTTGCGTGCTCATGGCCGCGCCGCTC
GACGACCACGCGCAGTCCGCCGCGCGCTGCAGTTGA
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protein sequence of Ggra6616.t1

>Ggra6616.t1 ID=Ggra6616.t1|Name=Ggra6616.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MAIQRPSALRTDRRTLLAQRAALLSRAVAPRVHTTGATDDAPRAVARGNA
TLLLPNGAPHVAFLAQLNGWRARRGRAPLARDARLEEEAQWYTTRFADGA
GFVTARRRTCRMYERVDDFFVVGADDASDAPPTAARGADALPRDCTLLAA
LGMDAVLTRFRRKLRARERRLLDARFAFGGAHVQLAQRRVHICVLMAAPL
DDHAQSAARCS*
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mRNA from alignment at tig00000081_pilon:642467..643102-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6616.t1 ID=Ggra6616.t1|Name=Ggra6616.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=636bp|location=Sequence derived from alignment at tig00000081_pilon:642467..643102- (Gracilaria gracilis GNS1m male)
ATGGCCATCCAACGGCCGAGCGCGCTACGCACCGACCGTCGCACGCTGCT
TGCGCAGCGCGCCGCGCTGCTGTCGCGCGCCGTCGCGCCGCGCGTGCACA
CCACGGGCGCCACGGACGACGCGCCGCGCGCCGTCGCGCGCGGAAACGCC
ACGCTGTTGCTGCCGAACGGCGCGCCGCACGTCGCGTTCCTGGCGCAGCT
CAACGGCTGGCGCGCGCGCCGCGGCCGCGCGCCGCTCGCGCGCGACGCGC
GACTGGAGGAGGAGGCGCAGTGGTACACCACGCGCTTCGCGGACGGCGCG
GGCTTTGTCACCGCGCGGCGACGTACTTGTCGCATGTACGAGCGCGTGGA
TGACTTCTTCGTGGTGGGCGCGGACGACGCGTCGGACGCGCCGCCCACGG
CCGCGCGCGGCGCGGACGCGCTGCCGCGCGACTGCACGCTGCTGGCGGCG
CTGGGCATGGACGCCGTGCTGACGCGCTTCCGCCGCAAGCTGCGCGCGCG
CGAGCGGCGCCTGCTGGACGCGCGCTTTGCGTTCGGCGGCGCGCATGTGC
AGCTGGCGCAGAGGCGCGTGCACATTTGCGTGCTCATGGCCGCGCCGCTC
GACGACCACGCGCAGTCCGCCGCGCGCTGCAGTTGA
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Coding sequence (CDS) from alignment at tig00000081_pilon:642467..643102-

>Ggra6616.t1 ID=Ggra6616.t1|Name=Ggra6616.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=636bp|location=Sequence derived from alignment at tig00000081_pilon:642467..643102- (Gracilaria gracilis GNS1m male)
ATGGCCATCCAACGGCCGAGCGCGCTACGCACCGACCGTCGCACGCTGCT
TGCGCAGCGCGCCGCGCTGCTGTCGCGCGCCGTCGCGCCGCGCGTGCACA
CCACGGGCGCCACGGACGACGCGCCGCGCGCCGTCGCGCGCGGAAACGCC
ACGCTGTTGCTGCCGAACGGCGCGCCGCACGTCGCGTTCCTGGCGCAGCT
CAACGGCTGGCGCGCGCGCCGCGGCCGCGCGCCGCTCGCGCGCGACGCGC
GACTGGAGGAGGAGGCGCAGTGGTACACCACGCGCTTCGCGGACGGCGCG
GGCTTTGTCACCGCGCGGCGACGTACTTGTCGCATGTACGAGCGCGTGGA
TGACTTCTTCGTGGTGGGCGCGGACGACGCGTCGGACGCGCCGCCCACGG
CCGCGCGCGGCGCGGACGCGCTGCCGCGCGACTGCACGCTGCTGGCGGCG
CTGGGCATGGACGCCGTGCTGACGCGCTTCCGCCGCAAGCTGCGCGCGCG
CGAGCGGCGCCTGCTGGACGCGCGCTTTGCGTTCGGCGGCGCGCATGTGC
AGCTGGCGCAGAGGCGCGTGCACATTTGCGTGCTCATGGCCGCGCCGCTC
GACGACCACGCGCAGTCCGCCGCGCGCTGCAGTTGA
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