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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 6669.EFX79468 |
| Preferred name | ABCB6 |
| PFAMs | ABC_membrane,ABC_tran,MTABC_N |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K05661,ko:K05663 |
| KEGG TC | 3.A.1.210 |
| KEGG Pathway | ko02010,map02010 |
| GOs | GO:0000041,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005768,GO:0005773,GO:0005774,GO:0005783,GO:0005794,GO:0005829,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008144,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010273,GO:0012505,GO:0015075,GO:0015086,GO:0015232,GO:0015318,GO:0015399,GO:0015405,GO:0015439,GO:0015562,GO:0015691,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019725,GO:0019866,GO:0019867,GO:0020037,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030554,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032592,GO:0032991,GO:0033013,GO:0033014,GO:0034220,GO:0034641,GO:0035639,GO:0036094,GO:0042221,GO:0042592,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043190,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043492,GO:0043588,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0046483,GO:0046686,GO:0046688,GO:0046873,GO:0046906,GO:0046915,GO:0046916,GO:0048037,GO:0048513,GO:0048731,GO:0048856,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051181,GO:0051184,GO:0051186,GO:0051188,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060322,GO:0061687,GO:0065007,GO:0065008,GO:0070013,GO:0070574,GO:0070838,GO:0071585,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072511,GO:0097159,GO:0097367,GO:0097501,GO:0097708,GO:0098533,GO:0098573,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098754,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990169,GO:1990170,GO:1990351 |
| Evalue | 7.3e-118 |
| EggNOG OGs | COG5265@1|root,KOG0056@2759|Eukaryota,38D03@33154|Opisthokonta,3BD6Y@33208|Metazoa,3CS0R@33213|Bilateria,41Y0M@6656|Arthropoda |
| Description | It is involved in the biological process described with transmembrane transport |
| COG category | Q |
| BRITE | ko00000,ko00001,ko02000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6554.t1.start1 | Ggra6554.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000081_pilon 252690..252692 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra6554.t1.stop1 | Ggra6554.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000081_pilon 255305..255307 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra6554.t1 ID=Ggra6554.t1|Name=Ggra6554.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=685bp MSFALTFLASAPSRFGQHRRPHPIGFLCALRGKPIRVVSPSQFMERESLI QPSSALPLYVNAVEDTATCSSLSDVDEQDHGSFDSSVHWKPTLQLVEPYL RPATRYFTFLTITSLSSLFLSRGLNLLQPYLTKLILDTLTISQTVPYSLL FYLFLTTTFAHVFNFICTFSYSIIECDATRRFGIDLYEHLHMLCASFHAN RRVGQLSKIVDRGTDALDTIVDLMIFTLLPTTLEAVFVITVFIRLRLSLI ALCNALCVSLFFAVTFFTTTSTVVTRKLVNNVDNQLGDRVVDTLLNHETV KSFAMEAHEVSVYSSFESIFQRLYTRFRLAVDTQQLFQHLIQSLALVISL LLAAVAMANNSLTSGDFVLIGAYVVQLFGPLATIATSYRLLAQSIIDLDK CVSLLRQESSVKDSPNAVELNFNSSDILEKKVGEIVFDRVSFSYPTSQNG VGQNGLREVTFKVAPGSTVALVGASGVGKSTILRLLLRFYDVSSGAIYID GCDIRSFSQASLRRNIGIVAQETALFNQTLRENIAYGRPNANDDEIAKAA DAAALTPLVRSLPQGLRSLVGERGVRLSGGERQRVGCARCILKSPAIVLL DEASSALDTRTERDIQTQLRRVCKNRTTIVVAHRLSTITMADNIVVLGED ERDNCVTVREQGSHQQLLDKKGLYASLWAAQTSS* back to topspliced messenger RNA >Ggra6554.t1 ID=Ggra6554.t1|Name=Ggra6554.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2055bp|location=Sequence derived from alignment at tig00000081_pilon:252690..255307+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGAGCTTCGCGTTGACATTCTTAGCTTCAGCACCATCTCGTTTCGGCCA GCATCGCCGTCCCCACCCTATTGGCTTTCTCTGTGCGTTGCGCGGAAAAC CGATTCGAGTGGTGTCACCGTCACAATTCATGGAGCGAGAATCTCTCATC CAACCTAGCTCAGCACTTCCTCTCTACGTCAATGCCGTCGAGGACACTGC CACATGCTCTTCGCTTTCTGACGTCGACGAACAAGATCATGGCTCCTTCG ATTCTTCAGTACATTGGAAACCCACTCTACAATTAGTGGAACCTTATCTA CGTCCGGCAACAAGATATTTCACCTTTCTCACGATCACCTCGTTAAGTTC TCTTTTTCTTTCCCGTGGTCTGAACTTGTTACAACCATACCTCACGAAGC TCATCCTTGATACCCTGACCATCTCCCAAACGGTCCCATATTCTCTGCTC TTCTACTTGTTTCTAACTACCACCTTCGCTCATGTGTTTAACTTCATTTG TACGTTCTCGTACTCCATTATCGAATGCGACGCTACGAGAAGGTTTGGTA TCGATCTTTATGAACATCTTCACATGCTATGTGCTTCATTCCATGCAAAC AGACGTGTAGGACAGCTGTCGAAGATCGTCGATAGGGGGACAGATGCCTT GGACACTATAGTTGACCTCATGATATTCACACTCTTACCAACAACGCTTG AAGCGGTATTCGTCATCACGGTATTCATCAGATTGCGCCTTTCCCTTATC GCTCTTTGTAATGCACTGTGCGTATCACTTTTCTTCGCTGTAACCTTCTT CACCACTACTTCGACTGTCGTGACGAGAAAGCTCGTAAACAATGTGGACA ATCAACTTGGGGATCGGGTGGTCGATACCTTGCTAAACCACGAAACTGTC AAGTCATTTGCGATGGAAGCTCATGAAGTTAGTGTTTACTCCTCGTTCGA ATCCATATTCCAACGATTGTACACCCGATTCCGGCTCGCTGTGGATACAC AACAACTCTTCCAACATCTTATACAGTCACTTGCTTTAGTCATATCTCTT TTGCTTGCTGCAGTGGCAATGGCAAACAATTCATTAACGTCTGGTGATTT TGTACTTATTGGTGCTTACGTTGTGCAGCTCTTTGGTCCGCTTGCGACAA TTGCCACTTCATATCGACTGCTAGCACAATCCATAATCGATCTTGACAAG TGCGTATCATTACTCCGTCAAGAATCTTCCGTGAAAGACTCACCAAATGC CGTGGAACTCAACTTCAATTCAAGTGACATACTGGAAAAGAAAGTTGGAG AAATTGTGTTTGATCGAGTTTCCTTCTCCTACCCGACCTCACAGAACGGG GTGGGACAAAACGGGCTACGTGAAGTGACATTCAAAGTGGCTCCTGGTAG CACTGTTGCCTTGGTGGGTGCTTCCGGTGTCGGAAAGAGCACTATTCTGA GACTTCTACTTCGTTTCTATGATGTATCAAGTGGCGCAATTTATATTGAT GGGTGTGATATACGCTCTTTCTCACAGGCATCTCTCCGCCGAAACATTGG CATCGTCGCTCAAGAAACGGCGCTCTTCAATCAAACTCTGCGAGAGAATA TTGCGTACGGCCGACCAAACGCGAACGATGATGAAATAGCGAAGGCCGCG GATGCGGCGGCACTTACGCCTCTGGTGCGAAGTCTGCCTCAGGGCTTGAG GTCTCTGGTAGGAGAACGTGGAGTACGGTTATCCGGCGGAGAGCGTCAGC GTGTAGGTTGTGCACGATGCATTCTGAAGTCTCCAGCCATCGTACTTCTC GATGAAGCATCTTCAGCACTGGATACGCGAACGGAGCGCGACATACAAAC TCAATTACGCCGTGTTTGTAAGAACCGAACTACGATTGTTGTGGCGCATC GACTGTCGACAATTACAATGGCTGATAACATAGTGGTCTTGGGAGAAGAT GAGCGGGATAATTGTGTTACTGTTAGGGAACAAGGCTCTCACCAACAATT GTTGGACAAGAAAGGACTGTACGCCAGTTTATGGGCTGCGCAGACCTCGA GCTGA back to topprotein sequence of Ggra6554.t1 >Ggra6554.t1 ID=Ggra6554.t1|Name=Ggra6554.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=685bp
MSFALTFLASAPSRFGQHRRPHPIGFLCALRGKPIRVVSPSQFMERESLI QPSSALPLYVNAVEDTATCSSLSDVDEQDHGSFDSSVHWKPTLQLVEPYL RPATRYFTFLTITSLSSLFLSRGLNLLQPYLTKLILDTLTISQTVPYSLL FYLFLTTTFAHVFNFICTFSYSIIECDATRRFGIDLYEHLHMLCASFHAN RRVGQLSKIVDRGTDALDTIVDLMIFTLLPTTLEAVFVITVFIRLRLSLI ALCNALCVSLFFAVTFFTTTSTVVTRKLVNNVDNQLGDRVVDTLLNHETV KSFAMEAHEVSVYSSFESIFQRLYTRFRLAVDTQQLFQHLIQSLALVISL LLAAVAMANNSLTSGDFVLIGAYVVQLFGPLATIATSYRLLAQSIIDLDK CVSLLRQESSVKDSPNAVELNFNSSDILEKKVGEIVFDRVSFSYPTSQNG VGQNGLREVTFKVAPGSTVALVGASGVGKSTILRLLLRFYDVSSGAIYID GCDIRSFSQASLRRNIGIVAQETALFNQTLRENIAYGRPNANDDEIAKAA DAAALTPLVRSLPQGLRSLVGERGVRLSGGERQRVGCARCILKSPAIVLL DEASSALDTRTERDIQTQLRRVCKNRTTIVVAHRLSTITMADNIVVLGED ERDNCVTVREQGSHQQLLDKKGLYASLWAAQTSS* back to topmRNA from alignment at tig00000081_pilon:252690..255307+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra6554.t1 ID=Ggra6554.t1|Name=Ggra6554.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2618bp|location=Sequence derived from alignment at tig00000081_pilon:252690..255307+ (Gracilaria gracilis GNS1m male) ATGAGCTTCGCGTTGACATTCTTAGCTTCAGCACCATCTCGTTTCGGCCA
GCATCGCCGTCCCCACCCTATTGGCTTTCTCTGTGCGTTGCGCGGAAAAC
CGATTCGAGTGGTGTCACCGTCACAATTCATGGAGCGAGAATCTCTCATC
CAACCTAGCTCAGCACTTCCTCTCTACGTCAATGCCGTCGAGGACACTGC
CACATGCTCTTCGCTTTCTGACGTCGACGAACAAGATCATGGCTCCTTCG
ATTCTTCAGTACATTGGAAACCCACTCTACAATTAGTGGAACCTTATCTA
CGTCCGGCAACAAGATATTTCACCTTTCTCACGATCACCTCGTTAAGTTC
TCTTTTTCTTTCCCGTGGTCTGAACTTGTTACAACCATACCTCACGAAGC
TCATCCTTGATACCCTGACCATCTCCCAAACGGTCCCATATTCTCTGCTC
TTCTACTTGTTTCTAACTACCACCTTCGCTCATGTGTTTAACTTCATTTG
TACGTTCTCGTACTCCATTATCGAATGCGACGCTACGAGAAGGTTTGGTA
TCGATCTTTATGAACATCTTCACATGCTATGTGCTTCATTCCATGCAAAC
AGACGTGTAGGACAGCTGTCGAAGATCGTCGATAGGGGGACAGATGCCTT
GGACACTATAGTTGACCTCATGATATTCACACTCTTACCAACGTGAGTTT
CGTCATGCGCCATCAAGTCATCCTCGTAATGTGTGCTCTAACCCTGCTAC
TAACTTGTATGGTTACAGAACGCTTGAAGCGGTATTCGTCATCACGGTAT
TCATCAGATTGCGCCTTTCCCTTATCGCTCTTTGTAATGCACTGTGCGTA
TCACTTTTCTTCGCTGTAACCTTCTTCACCACTACTTCGACGTACGTTCT
GTAACCTTCTCGAGCTTTCTTCTTTACATCCCTGTTCTGACAAGACACTC
AGTGTCGTGACGAGAAAGCTCGTAAACAATGTGGACAATCAACTTGGGGG
TAAGTTGTACTGGTTTTTCTTCCAACTGGTTTACTTGTGAGCTTACTCAT
TATGATTTCTCATGATATACTTCCTCTGTTTTAAGATCGGGTACGTGTCA
TTCACTCATCCTCGTGTATCTATGCCAAGTATTCAACACGCATCATAGCA
TTCAACTGACTTCATATTTAGGTGGTCGATACCTTGCTAAACCACGAAAC
TGTCAAGTCATTTGCGATGGAAGCTCATGAAGTTAGTGTTTACTCCTCGT
TCGAATCCATATTCCAACGATTGTACACCCGATTCCGGCTCGCTGTGGAT
ACACAACAACTCTTCCAACATCTTATACAGTCACTTGCTTTAGTCATATC
TCTTTTGCTTGCTGCAGTGGCAATGGCAAACAATTCATTAACGTCTGGTG
ATTTTGTACTTATTGGTGCTTACGTTGTGCAGCTCTTTGGTCCGCTTGCG
GTAAGTTGCATATTGGTTCCCTTTCTGAAGCGCACGAATTCGTACATTAA
CGACTCCTTTAGACAATTGCCACTTCATATCGACTGCTAGCACAATCCAT
AATCGATCTTGACAAGTGCGTATCATTACTCCGTCAAGAATCTTCCGTGA
AAGACTCACCAAATGCCGTGGAACTCAACTTCAATTCAAGTGACATACTG
GAAAAGAAAGTTGGAGAAATTGTGTTTGATCGAGTTTCCTTCTCCTACCC
GACCTCACAGAACGGGGTGGGACAAAACGGGCTACGTGAAGTGACATTCA
AAGTGGCTCCTGGTAGCACTGTTGCCTTGGTGGGTGCTTCCGGTGTCGGA
AAGAGGTAGGTGAAGAACAATTTTGTTATGATGATACACGTATAGAAGCT
AACATATGAAGCATATGCAGCACTATTCTGAGACTTCTACTTCGTTTCTA
TGATGTATCAAGTGGCGCAATTTATATTGATGGGTGTGATATACGCTCTT
TCTCACAGGCATCTCTCCGCCGAAACATTGGCATCGTCGCTCAAGAAACG
GTAAGATAACCTTCTCCATATGTGACATGTAACCCTTCCATGTCGTCATC
GCTAACGAAAACCATAGGCGCTCTTCAATCAAACTCTGCGAGAGAATATT
GCGTACGGCCGACCAAACGCGAACGATGATGAAATAGCGAAGGCCGCGGA
TGCGGCGGCACTTACGCCTCTGGTGCGAAGTCTGCCTCAGGGCTTGAGGT
CTCTGGTAGGAGAACGTGGAGTACGGTTATCCGGCGGAGAGCGTCAGCGT
GTAGGTTGTGCACGATGCATTCTGAAGTCTCCAGCCATCGTACTTCTCGA
TGAAGCATCTTCAGCACTGGTATGTTGCAACTCAGGTTAATTCTATCAAT
AATCACGTGTTTACTTGTAACTAACCCTCCGTAGGATACGCGAACGGAGC
GCGACATACAAACTCAATTACGCCGTGTTTGTAAGAACCGAACTACGATT
GTTGTGGCGCATCGACTGTCGACAATTACAATGGCTGATAACATAGTGGT
CTTGGGAGAAGATGAGCGGGATAATTGTGTTACTGTTAGGGAACAAGGCT
CTCACCAACAATTGTTGGACAAGAAAGGACTGTACGCCAGTTTATGGGCT
GCGCAGACCTCGAGCTGA back to topCoding sequence (CDS) from alignment at tig00000081_pilon:252690..255307+ >Ggra6554.t1 ID=Ggra6554.t1|Name=Ggra6554.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2055bp|location=Sequence derived from alignment at tig00000081_pilon:252690..255307+ (Gracilaria gracilis GNS1m male) ATGAGCTTCGCGTTGACATTCTTAGCTTCAGCACCATCTCGTTTCGGCCA GCATCGCCGTCCCCACCCTATTGGCTTTCTCTGTGCGTTGCGCGGAAAAC CGATTCGAGTGGTGTCACCGTCACAATTCATGGAGCGAGAATCTCTCATC CAACCTAGCTCAGCACTTCCTCTCTACGTCAATGCCGTCGAGGACACTGC CACATGCTCTTCGCTTTCTGACGTCGACGAACAAGATCATGGCTCCTTCG ATTCTTCAGTACATTGGAAACCCACTCTACAATTAGTGGAACCTTATCTA CGTCCGGCAACAAGATATTTCACCTTTCTCACGATCACCTCGTTAAGTTC TCTTTTTCTTTCCCGTGGTCTGAACTTGTTACAACCATACCTCACGAAGC TCATCCTTGATACCCTGACCATCTCCCAAACGGTCCCATATTCTCTGCTC TTCTACTTGTTTCTAACTACCACCTTCGCTCATGTGTTTAACTTCATTTG TACGTTCTCGTACTCCATTATCGAATGCGACGCTACGAGAAGGTTTGGTA TCGATCTTTATGAACATCTTCACATGCTATGTGCTTCATTCCATGCAAAC AGACGTGTAGGACAGCTGTCGAAGATCGTCGATAGGGGGACAGATGCCTT GGACACTATAGTTGACCTCATGATATTCACACTCTTACCAACAACGCTTG AAGCGGTATTCGTCATCACGGTATTCATCAGATTGCGCCTTTCCCTTATC GCTCTTTGTAATGCACTGTGCGTATCACTTTTCTTCGCTGTAACCTTCTT CACCACTACTTCGACTGTCGTGACGAGAAAGCTCGTAAACAATGTGGACA ATCAACTTGGGGATCGGGTGGTCGATACCTTGCTAAACCACGAAACTGTC AAGTCATTTGCGATGGAAGCTCATGAAGTTAGTGTTTACTCCTCGTTCGA ATCCATATTCCAACGATTGTACACCCGATTCCGGCTCGCTGTGGATACAC AACAACTCTTCCAACATCTTATACAGTCACTTGCTTTAGTCATATCTCTT TTGCTTGCTGCAGTGGCAATGGCAAACAATTCATTAACGTCTGGTGATTT TGTACTTATTGGTGCTTACGTTGTGCAGCTCTTTGGTCCGCTTGCGACAA TTGCCACTTCATATCGACTGCTAGCACAATCCATAATCGATCTTGACAAG TGCGTATCATTACTCCGTCAAGAATCTTCCGTGAAAGACTCACCAAATGC CGTGGAACTCAACTTCAATTCAAGTGACATACTGGAAAAGAAAGTTGGAG AAATTGTGTTTGATCGAGTTTCCTTCTCCTACCCGACCTCACAGAACGGG GTGGGACAAAACGGGCTACGTGAAGTGACATTCAAAGTGGCTCCTGGTAG CACTGTTGCCTTGGTGGGTGCTTCCGGTGTCGGAAAGAGCACTATTCTGA GACTTCTACTTCGTTTCTATGATGTATCAAGTGGCGCAATTTATATTGAT GGGTGTGATATACGCTCTTTCTCACAGGCATCTCTCCGCCGAAACATTGG CATCGTCGCTCAAGAAACGGCGCTCTTCAATCAAACTCTGCGAGAGAATA TTGCGTACGGCCGACCAAACGCGAACGATGATGAAATAGCGAAGGCCGCG GATGCGGCGGCACTTACGCCTCTGGTGCGAAGTCTGCCTCAGGGCTTGAG GTCTCTGGTAGGAGAACGTGGAGTACGGTTATCCGGCGGAGAGCGTCAGC GTGTAGGTTGTGCACGATGCATTCTGAAGTCTCCAGCCATCGTACTTCTC GATGAAGCATCTTCAGCACTGGATACGCGAACGGAGCGCGACATACAAAC TCAATTACGCCGTGTTTGTAAGAACCGAACTACGATTGTTGTGGCGCATC GACTGTCGACAATTACAATGGCTGATAACATAGTGGTCTTGGGAGAAGAT GAGCGGGATAATTGTGTTACTGTTAGGGAACAAGGCTCTCACCAACAATT GTTGGACAAGAAAGGACTGTACGCCAGTTTATGGGCTGCGCAGACCTCGA GCTGA back to top
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