Ggra6528.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6528.t1
Unique NameGgra6528.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length147
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:164825..165265 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6528Ggra6528Gracilaria gracilis GNS1m malegenetig00000081_pilon 164825..165265 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6528.t1.stop1Ggra6528.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000081_pilon 164825..164827 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6528.t1.CDS1Ggra6528.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000081_pilon 164825..165265 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6528.t1.exon1Ggra6528.t1.exon1Gracilaria gracilis GNS1m maleexontig00000081_pilon 164825..165265 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6528.t1.start1Ggra6528.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000081_pilon 165263..165265 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6528.t1Ggra6528.t1Gracilaria gracilis GNS1m malepolypeptidetig00000081_pilon 164825..165265 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6528.t1 ID=Ggra6528.t1|Name=Ggra6528.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=147bp
MSKVSSIVESMTEKLKGSAACKKQASSISLQLKILHRMSLSSAAFNKRLE
EHMQKAATLGGFNTTTDVAELNAEIHENDQRLLLGNTSSYQWGTPTVSTA
SADVVNIAAAAPNESMSTITRPPNLNFDHQLTNVGQNQNSKPPEAA*
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spliced messenger RNA

>Ggra6528.t1 ID=Ggra6528.t1|Name=Ggra6528.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=441bp|location=Sequence derived from alignment at tig00000081_pilon:164825..165265- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGAAAGTCTCCAGCATTGTAGAGAGCATGACGGAAAAGTTGAAAGG
ATCGGCTGCTTGCAAAAAGCAAGCGTCTTCGATATCACTGCAATTGAAAA
TATTGCATCGCATGTCCCTCTCCTCTGCCGCTTTTAACAAACGGCTTGAG
GAGCATATGCAGAAAGCAGCAACACTTGGTGGATTTAATACGACAACCGA
TGTGGCCGAGCTTAATGCAGAAATTCACGAGAACGACCAAAGGCTTTTGC
TTGGAAACACATCTTCATATCAGTGGGGAACGCCTACTGTGTCTACTGCT
TCCGCAGACGTTGTCAACATAGCTGCCGCCGCCCCGAATGAAAGCATGAG
CACAATCACCAGGCCGCCCAATTTGAATTTCGATCACCAACTCACAAATG
TTGGACAAAATCAGAATTCGAAGCCGCCGGAGGCTGCTTGA
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protein sequence of Ggra6528.t1

>Ggra6528.t1 ID=Ggra6528.t1|Name=Ggra6528.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=147bp
MSKVSSIVESMTEKLKGSAACKKQASSISLQLKILHRMSLSSAAFNKRLE
EHMQKAATLGGFNTTTDVAELNAEIHENDQRLLLGNTSSYQWGTPTVSTA
SADVVNIAAAAPNESMSTITRPPNLNFDHQLTNVGQNQNSKPPEAA*
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mRNA from alignment at tig00000081_pilon:164825..165265-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6528.t1 ID=Ggra6528.t1|Name=Ggra6528.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=441bp|location=Sequence derived from alignment at tig00000081_pilon:164825..165265- (Gracilaria gracilis GNS1m male)
ATGTCGAAAGTCTCCAGCATTGTAGAGAGCATGACGGAAAAGTTGAAAGG
ATCGGCTGCTTGCAAAAAGCAAGCGTCTTCGATATCACTGCAATTGAAAA
TATTGCATCGCATGTCCCTCTCCTCTGCCGCTTTTAACAAACGGCTTGAG
GAGCATATGCAGAAAGCAGCAACACTTGGTGGATTTAATACGACAACCGA
TGTGGCCGAGCTTAATGCAGAAATTCACGAGAACGACCAAAGGCTTTTGC
TTGGAAACACATCTTCATATCAGTGGGGAACGCCTACTGTGTCTACTGCT
TCCGCAGACGTTGTCAACATAGCTGCCGCCGCCCCGAATGAAAGCATGAG
CACAATCACCAGGCCGCCCAATTTGAATTTCGATCACCAACTCACAAATG
TTGGACAAAATCAGAATTCGAAGCCGCCGGAGGCTGCTTGA
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Coding sequence (CDS) from alignment at tig00000081_pilon:164825..165265-

>Ggra6528.t1 ID=Ggra6528.t1|Name=Ggra6528.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=441bp|location=Sequence derived from alignment at tig00000081_pilon:164825..165265- (Gracilaria gracilis GNS1m male)
ATGTCGAAAGTCTCCAGCATTGTAGAGAGCATGACGGAAAAGTTGAAAGG
ATCGGCTGCTTGCAAAAAGCAAGCGTCTTCGATATCACTGCAATTGAAAA
TATTGCATCGCATGTCCCTCTCCTCTGCCGCTTTTAACAAACGGCTTGAG
GAGCATATGCAGAAAGCAGCAACACTTGGTGGATTTAATACGACAACCGA
TGTGGCCGAGCTTAATGCAGAAATTCACGAGAACGACCAAAGGCTTTTGC
TTGGAAACACATCTTCATATCAGTGGGGAACGCCTACTGTGTCTACTGCT
TCCGCAGACGTTGTCAACATAGCTGCCGCCGCCCCGAATGAAAGCATGAG
CACAATCACCAGGCCGCCCAATTTGAATTTCGATCACCAACTCACAAATG
TTGGACAAAATCAGAATTCGAAGCCGCCGGAGGCTGCTTGA
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