Ggra6511.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6511.t1
Unique NameGgra6511.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length169
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:655255..655761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6511Ggra6511Gracilaria gracilis GNS1m malegenetig00000074_pilon 655255..655761 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6511.t1.start1Ggra6511.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000074_pilon 655255..655257 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6511.t1.CDS1Ggra6511.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000074_pilon 655255..655761 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6511.t1.exon1Ggra6511.t1.exon1Gracilaria gracilis GNS1m maleexontig00000074_pilon 655255..655761 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6511.t1.stop1Ggra6511.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000074_pilon 655759..655761 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6511.t1Ggra6511.t1Gracilaria gracilis GNS1m malepolypeptidetig00000074_pilon 655255..655761 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6511.t1 ID=Ggra6511.t1|Name=Ggra6511.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=169bp
MSVRGKTILYCVKDEIELADELCSLFKKLQLFAVGDGNGCSEFFSVCRND
VKQWVEIEKDIDVQEAVMSDTCDEIVGDIFLNGVDDGKEEETIKLRAGNG
NESGSVQLDIPGIGAISRLFSPLESLSDSSELERFSMLLRAAKRDLVDVS
ASQRRKGQRQTTVSEFFQ*
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spliced messenger RNA

>Ggra6511.t1 ID=Ggra6511.t1|Name=Ggra6511.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=507bp|location=Sequence derived from alignment at tig00000074_pilon:655255..655761+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTGTGCGTGGAAAGACAATACTATACTGCGTGAAAGATGAGATTGA
GCTAGCTGACGAACTGTGTTCGTTATTTAAAAAACTACAATTGTTTGCAG
TTGGTGATGGAAATGGTTGTTCAGAGTTTTTCAGTGTTTGCAGGAATGAT
GTGAAACAGTGGGTGGAGATTGAGAAAGATATAGACGTGCAGGAGGCTGT
GATGTCTGACACGTGCGATGAAATTGTTGGAGATATTTTTTTGAATGGTG
TTGATGATGGCAAAGAAGAAGAGACTATTAAATTACGAGCTGGAAATGGG
AATGAATCTGGGTCTGTGCAGTTGGATATTCCTGGTATTGGAGCCATATC
AAGACTGTTTTCTCCATTAGAGAGTTTGTCAGATAGCAGTGAACTAGAAC
GCTTCTCGATGCTACTACGTGCCGCTAAAAGAGACTTGGTGGACGTTTCA
GCTTCACAAAGAAGAAAGGGCCAACGTCAGACTACTGTGAGCGAGTTTTT
TCAGTAA
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protein sequence of Ggra6511.t1

>Ggra6511.t1 ID=Ggra6511.t1|Name=Ggra6511.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=169bp
MSVRGKTILYCVKDEIELADELCSLFKKLQLFAVGDGNGCSEFFSVCRND
VKQWVEIEKDIDVQEAVMSDTCDEIVGDIFLNGVDDGKEEETIKLRAGNG
NESGSVQLDIPGIGAISRLFSPLESLSDSSELERFSMLLRAAKRDLVDVS
ASQRRKGQRQTTVSEFFQ*
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mRNA from alignment at tig00000074_pilon:655255..655761+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6511.t1 ID=Ggra6511.t1|Name=Ggra6511.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=507bp|location=Sequence derived from alignment at tig00000074_pilon:655255..655761+ (Gracilaria gracilis GNS1m male)
ATGTCTGTGCGTGGAAAGACAATACTATACTGCGTGAAAGATGAGATTGA
GCTAGCTGACGAACTGTGTTCGTTATTTAAAAAACTACAATTGTTTGCAG
TTGGTGATGGAAATGGTTGTTCAGAGTTTTTCAGTGTTTGCAGGAATGAT
GTGAAACAGTGGGTGGAGATTGAGAAAGATATAGACGTGCAGGAGGCTGT
GATGTCTGACACGTGCGATGAAATTGTTGGAGATATTTTTTTGAATGGTG
TTGATGATGGCAAAGAAGAAGAGACTATTAAATTACGAGCTGGAAATGGG
AATGAATCTGGGTCTGTGCAGTTGGATATTCCTGGTATTGGAGCCATATC
AAGACTGTTTTCTCCATTAGAGAGTTTGTCAGATAGCAGTGAACTAGAAC
GCTTCTCGATGCTACTACGTGCCGCTAAAAGAGACTTGGTGGACGTTTCA
GCTTCACAAAGAAGAAAGGGCCAACGTCAGACTACTGTGAGCGAGTTTTT
TCAGTAA
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Coding sequence (CDS) from alignment at tig00000074_pilon:655255..655761+

>Ggra6511.t1 ID=Ggra6511.t1|Name=Ggra6511.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=507bp|location=Sequence derived from alignment at tig00000074_pilon:655255..655761+ (Gracilaria gracilis GNS1m male)
ATGTCTGTGCGTGGAAAGACAATACTATACTGCGTGAAAGATGAGATTGA
GCTAGCTGACGAACTGTGTTCGTTATTTAAAAAACTACAATTGTTTGCAG
TTGGTGATGGAAATGGTTGTTCAGAGTTTTTCAGTGTTTGCAGGAATGAT
GTGAAACAGTGGGTGGAGATTGAGAAAGATATAGACGTGCAGGAGGCTGT
GATGTCTGACACGTGCGATGAAATTGTTGGAGATATTTTTTTGAATGGTG
TTGATGATGGCAAAGAAGAAGAGACTATTAAATTACGAGCTGGAAATGGG
AATGAATCTGGGTCTGTGCAGTTGGATATTCCTGGTATTGGAGCCATATC
AAGACTGTTTTCTCCATTAGAGAGTTTGTCAGATAGCAGTGAACTAGAAC
GCTTCTCGATGCTACTACGTGCCGCTAAAAGAGACTTGGTGGACGTTTCA
GCTTCACAAAGAAGAAAGGGCCAACGTCAGACTACTGTGAGCGAGTTTTT
TCAGTAA
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