Ggra6444.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6444.t1
Unique NameGgra6444.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length346
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:58564..59601 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6444Ggra6444Gracilaria gracilis GNS1m malegenetig00000074_pilon 58564..59601 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6444.t1.stop1Ggra6444.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000074_pilon 58564..58566 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6444.t1.CDS1Ggra6444.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000074_pilon 58564..59601 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6444.t1.exon1Ggra6444.t1.exon1Gracilaria gracilis GNS1m maleexontig00000074_pilon 58564..59601 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6444.t1.start1Ggra6444.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000074_pilon 59599..59601 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6444.t1Ggra6444.t1Gracilaria gracilis GNS1m malepolypeptidetig00000074_pilon 58564..59601 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6444.t1 ID=Ggra6444.t1|Name=Ggra6444.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=346bp
MASARTLGTAELGALRYARALDAALWPVQVQLRADARDDAAPPWRSGASS
SGAYELRVDDAHSYAMARRADGGAWVRTFDAHEHALTYEVLREGRRVAAG
GLTVVAPPPPLSGQRATRALSARSGARTGARVLKMRADERGLRAVLFVYD
QQLWGVRRVWVRVDDDADGADGGVRVGTHELRRNADAFEALLYVAAGELR
FRFVVLPTERVPLCALPFTPLGWDVAAATRDGELVTWPLCVRVLRDDDHH
HHHDDGAPGGARRRLRGVWRLLLRVALAVAAVSVGAFVAGVLPLHASEGE
GQAEGERQAEGEAEEGQQAAERGAQRRNSSDGGDAALQHACAMPA*
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spliced messenger RNA

>Ggra6444.t1 ID=Ggra6444.t1|Name=Ggra6444.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1038bp|location=Sequence derived from alignment at tig00000074_pilon:58564..59601- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGAGCGCGCGCACGCTGGGCACGGCCGAACTGGGCGCGCTTCGCTA
CGCGCGCGCGCTTGACGCCGCGCTGTGGCCGGTGCAAGTGCAGCTGCGCG
CGGACGCGCGCGACGACGCGGCGCCGCCGTGGCGCAGTGGCGCAAGCAGC
AGCGGCGCGTACGAGCTGCGCGTGGACGACGCGCACTCGTACGCCATGGC
GCGGCGCGCCGACGGCGGCGCGTGGGTGCGCACGTTCGACGCGCATGAAC
ACGCGCTCACGTACGAGGTGCTACGCGAGGGCCGGCGCGTGGCGGCCGGC
GGACTGACGGTGGTGGCGCCGCCGCCGCCGCTGAGCGGGCAGCGCGCCAC
GCGCGCGCTGAGCGCGCGCTCGGGCGCGCGCACCGGCGCGCGCGTGCTCA
AGATGCGCGCGGATGAGCGCGGACTACGCGCGGTGCTGTTTGTGTACGAC
CAGCAGCTGTGGGGCGTGCGGCGCGTGTGGGTGCGCGTCGACGACGACGC
CGATGGTGCTGATGGCGGCGTGCGCGTGGGCACGCACGAGCTGCGACGCA
ATGCGGACGCGTTTGAGGCGCTGCTGTACGTGGCGGCGGGCGAGCTGCGC
TTCCGCTTCGTGGTGCTGCCCACCGAGCGCGTGCCGCTGTGCGCGCTGCC
GTTCACGCCGCTGGGCTGGGACGTGGCGGCGGCCACGCGCGACGGCGAGC
TGGTGACGTGGCCCTTGTGCGTGCGCGTGCTGCGCGACGACGACCACCAC
CACCACCACGACGATGGCGCGCCAGGCGGCGCGCGGCGGCGGCTGCGCGG
CGTGTGGCGACTGCTGCTGCGCGTGGCGCTGGCGGTGGCGGCCGTGTCGG
TGGGCGCGTTTGTGGCGGGCGTGCTGCCGCTGCACGCGAGCGAGGGAGAG
GGACAGGCGGAGGGAGAGCGACAGGCGGAGGGAGAGGCGGAGGAGGGGCA
GCAAGCGGCTGAGCGCGGCGCGCAGCGTCGGAACAGCAGCGACGGCGGCG
ACGCGGCGCTGCAGCACGCGTGCGCAATGCCCGCCTAA
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protein sequence of Ggra6444.t1

>Ggra6444.t1 ID=Ggra6444.t1|Name=Ggra6444.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=346bp
MASARTLGTAELGALRYARALDAALWPVQVQLRADARDDAAPPWRSGASS
SGAYELRVDDAHSYAMARRADGGAWVRTFDAHEHALTYEVLREGRRVAAG
GLTVVAPPPPLSGQRATRALSARSGARTGARVLKMRADERGLRAVLFVYD
QQLWGVRRVWVRVDDDADGADGGVRVGTHELRRNADAFEALLYVAAGELR
FRFVVLPTERVPLCALPFTPLGWDVAAATRDGELVTWPLCVRVLRDDDHH
HHHDDGAPGGARRRLRGVWRLLLRVALAVAAVSVGAFVAGVLPLHASEGE
GQAEGERQAEGEAEEGQQAAERGAQRRNSSDGGDAALQHACAMPA*
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mRNA from alignment at tig00000074_pilon:58564..59601-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6444.t1 ID=Ggra6444.t1|Name=Ggra6444.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1038bp|location=Sequence derived from alignment at tig00000074_pilon:58564..59601- (Gracilaria gracilis GNS1m male)
ATGGCGAGCGCGCGCACGCTGGGCACGGCCGAACTGGGCGCGCTTCGCTA
CGCGCGCGCGCTTGACGCCGCGCTGTGGCCGGTGCAAGTGCAGCTGCGCG
CGGACGCGCGCGACGACGCGGCGCCGCCGTGGCGCAGTGGCGCAAGCAGC
AGCGGCGCGTACGAGCTGCGCGTGGACGACGCGCACTCGTACGCCATGGC
GCGGCGCGCCGACGGCGGCGCGTGGGTGCGCACGTTCGACGCGCATGAAC
ACGCGCTCACGTACGAGGTGCTACGCGAGGGCCGGCGCGTGGCGGCCGGC
GGACTGACGGTGGTGGCGCCGCCGCCGCCGCTGAGCGGGCAGCGCGCCAC
GCGCGCGCTGAGCGCGCGCTCGGGCGCGCGCACCGGCGCGCGCGTGCTCA
AGATGCGCGCGGATGAGCGCGGACTACGCGCGGTGCTGTTTGTGTACGAC
CAGCAGCTGTGGGGCGTGCGGCGCGTGTGGGTGCGCGTCGACGACGACGC
CGATGGTGCTGATGGCGGCGTGCGCGTGGGCACGCACGAGCTGCGACGCA
ATGCGGACGCGTTTGAGGCGCTGCTGTACGTGGCGGCGGGCGAGCTGCGC
TTCCGCTTCGTGGTGCTGCCCACCGAGCGCGTGCCGCTGTGCGCGCTGCC
GTTCACGCCGCTGGGCTGGGACGTGGCGGCGGCCACGCGCGACGGCGAGC
TGGTGACGTGGCCCTTGTGCGTGCGCGTGCTGCGCGACGACGACCACCAC
CACCACCACGACGATGGCGCGCCAGGCGGCGCGCGGCGGCGGCTGCGCGG
CGTGTGGCGACTGCTGCTGCGCGTGGCGCTGGCGGTGGCGGCCGTGTCGG
TGGGCGCGTTTGTGGCGGGCGTGCTGCCGCTGCACGCGAGCGAGGGAGAG
GGACAGGCGGAGGGAGAGCGACAGGCGGAGGGAGAGGCGGAGGAGGGGCA
GCAAGCGGCTGAGCGCGGCGCGCAGCGTCGGAACAGCAGCGACGGCGGCG
ACGCGGCGCTGCAGCACGCGTGCGCAATGCCCGCCTAA
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Coding sequence (CDS) from alignment at tig00000074_pilon:58564..59601-

>Ggra6444.t1 ID=Ggra6444.t1|Name=Ggra6444.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1038bp|location=Sequence derived from alignment at tig00000074_pilon:58564..59601- (Gracilaria gracilis GNS1m male)
ATGGCGAGCGCGCGCACGCTGGGCACGGCCGAACTGGGCGCGCTTCGCTA
CGCGCGCGCGCTTGACGCCGCGCTGTGGCCGGTGCAAGTGCAGCTGCGCG
CGGACGCGCGCGACGACGCGGCGCCGCCGTGGCGCAGTGGCGCAAGCAGC
AGCGGCGCGTACGAGCTGCGCGTGGACGACGCGCACTCGTACGCCATGGC
GCGGCGCGCCGACGGCGGCGCGTGGGTGCGCACGTTCGACGCGCATGAAC
ACGCGCTCACGTACGAGGTGCTACGCGAGGGCCGGCGCGTGGCGGCCGGC
GGACTGACGGTGGTGGCGCCGCCGCCGCCGCTGAGCGGGCAGCGCGCCAC
GCGCGCGCTGAGCGCGCGCTCGGGCGCGCGCACCGGCGCGCGCGTGCTCA
AGATGCGCGCGGATGAGCGCGGACTACGCGCGGTGCTGTTTGTGTACGAC
CAGCAGCTGTGGGGCGTGCGGCGCGTGTGGGTGCGCGTCGACGACGACGC
CGATGGTGCTGATGGCGGCGTGCGCGTGGGCACGCACGAGCTGCGACGCA
ATGCGGACGCGTTTGAGGCGCTGCTGTACGTGGCGGCGGGCGAGCTGCGC
TTCCGCTTCGTGGTGCTGCCCACCGAGCGCGTGCCGCTGTGCGCGCTGCC
GTTCACGCCGCTGGGCTGGGACGTGGCGGCGGCCACGCGCGACGGCGAGC
TGGTGACGTGGCCCTTGTGCGTGCGCGTGCTGCGCGACGACGACCACCAC
CACCACCACGACGATGGCGCGCCAGGCGGCGCGCGGCGGCGGCTGCGCGG
CGTGTGGCGACTGCTGCTGCGCGTGGCGCTGGCGGTGGCGGCCGTGTCGG
TGGGCGCGTTTGTGGCGGGCGTGCTGCCGCTGCACGCGAGCGAGGGAGAG
GGACAGGCGGAGGGAGAGCGACAGGCGGAGGGAGAGGCGGAGGAGGGGCA
GCAAGCGGCTGAGCGCGGCGCGCAGCGTCGGAACAGCAGCGACGGCGGCG
ACGCGGCGCTGCAGCACGCGTGCGCAATGCCCGCCTAA
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