Ggra6319.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6319.t1
Unique NameGgra6319.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length297
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:90871..91761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6319Ggra6319Gracilaria gracilis GNS1m malegenetig00000096_pilon 90871..91761 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6319.t1.stop1Ggra6319.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000096_pilon 90871..90873 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6319.t1.CDS1Ggra6319.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000096_pilon 90871..91761 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6319.t1.exon1Ggra6319.t1.exon1Gracilaria gracilis GNS1m maleexontig00000096_pilon 90871..91761 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6319.t1.start1Ggra6319.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000096_pilon 91759..91761 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6319.t1Ggra6319.t1Gracilaria gracilis GNS1m malepolypeptidetig00000096_pilon 90871..91761 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6319.t1 ID=Ggra6319.t1|Name=Ggra6319.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=297bp
MKRCVPRHGNHANATVTQCRAVYASFVAHVYLLLPSSIRNLSTMNAYYAQ
GRTATPSYPLNHVNREPRDTQTPKEDVADRAAVQGPNGNDDGTVYDAVVD
EKDAIRPVHRAIDKAVADEATVDGSPDDYVIDHAITPVHGAADIDATPDG
PKSDDKGEAHSDEGVPWDIETYAEEYEKLDRSLSREVQQLNQWKRFANDL
LPEIGATKGQKSIVQRLLNERNALRAELQISKKQHTACKKKLQVQSLQQH
EQLSVIDKFQEDFGRLEGELKEAQRLHKVVADLKHIAESVRSLIDK*
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spliced messenger RNA

>Ggra6319.t1 ID=Ggra6319.t1|Name=Ggra6319.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=891bp|location=Sequence derived from alignment at tig00000096_pilon:90871..91761- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCGCTGTGTCCCCCGCCATGGAAATCATGCGAACGCAACTGTCAC
ACAATGCCGCGCCGTCTATGCCTCTTTCGTCGCCCACGTCTATTTACTTC
TTCCTTCTTCCATCCGCAACCTGTCTACTATGAATGCATATTATGCTCAA
GGTAGGACAGCCACGCCATCCTATCCACTGAATCATGTCAACCGAGAACC
AAGAGACACGCAGACTCCGAAAGAGGACGTAGCTGACAGAGCGGCTGTGC
AGGGACCTAATGGAAATGATGATGGTACTGTATACGATGCTGTTGTGGAC
GAGAAAGATGCAATACGACCCGTTCATCGCGCTATTGACAAAGCTGTTGC
CGATGAAGCCACTGTGGATGGCTCTCCTGACGACTACGTTATTGACCATG
CAATAACCCCTGTTCATGGCGCTGCTGATATCGATGCTACACCTGACGGG
CCTAAATCTGACGACAAAGGTGAGGCACACTCGGACGAAGGTGTTCCTTG
GGACATTGAAACGTATGCTGAAGAGTATGAGAAGTTAGACAGAAGCCTTT
CCCGCGAGGTGCAACAACTGAACCAGTGGAAAAGGTTTGCCAACGACTTA
CTTCCCGAGATTGGAGCAACAAAGGGCCAGAAATCGATAGTTCAGCGGCT
TCTCAATGAAAGAAATGCTCTGAGAGCTGAGCTTCAAATCTCAAAGAAAC
AACATACCGCGTGCAAGAAGAAGCTACAGGTTCAGAGCCTTCAACAACAT
GAGCAGCTCTCAGTAATCGACAAGTTCCAGGAGGATTTCGGCCGATTGGA
GGGAGAGCTGAAAGAAGCACAGAGGCTACATAAGGTTGTGGCCGATCTGA
AGCACATTGCTGAATCTGTCCGATCGTTAATCGACAAGTAG
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protein sequence of Ggra6319.t1

>Ggra6319.t1 ID=Ggra6319.t1|Name=Ggra6319.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=297bp
MKRCVPRHGNHANATVTQCRAVYASFVAHVYLLLPSSIRNLSTMNAYYAQ
GRTATPSYPLNHVNREPRDTQTPKEDVADRAAVQGPNGNDDGTVYDAVVD
EKDAIRPVHRAIDKAVADEATVDGSPDDYVIDHAITPVHGAADIDATPDG
PKSDDKGEAHSDEGVPWDIETYAEEYEKLDRSLSREVQQLNQWKRFANDL
LPEIGATKGQKSIVQRLLNERNALRAELQISKKQHTACKKKLQVQSLQQH
EQLSVIDKFQEDFGRLEGELKEAQRLHKVVADLKHIAESVRSLIDK*
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mRNA from alignment at tig00000096_pilon:90871..91761-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6319.t1 ID=Ggra6319.t1|Name=Ggra6319.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=891bp|location=Sequence derived from alignment at tig00000096_pilon:90871..91761- (Gracilaria gracilis GNS1m male)
ATGAAGCGCTGTGTCCCCCGCCATGGAAATCATGCGAACGCAACTGTCAC
ACAATGCCGCGCCGTCTATGCCTCTTTCGTCGCCCACGTCTATTTACTTC
TTCCTTCTTCCATCCGCAACCTGTCTACTATGAATGCATATTATGCTCAA
GGTAGGACAGCCACGCCATCCTATCCACTGAATCATGTCAACCGAGAACC
AAGAGACACGCAGACTCCGAAAGAGGACGTAGCTGACAGAGCGGCTGTGC
AGGGACCTAATGGAAATGATGATGGTACTGTATACGATGCTGTTGTGGAC
GAGAAAGATGCAATACGACCCGTTCATCGCGCTATTGACAAAGCTGTTGC
CGATGAAGCCACTGTGGATGGCTCTCCTGACGACTACGTTATTGACCATG
CAATAACCCCTGTTCATGGCGCTGCTGATATCGATGCTACACCTGACGGG
CCTAAATCTGACGACAAAGGTGAGGCACACTCGGACGAAGGTGTTCCTTG
GGACATTGAAACGTATGCTGAAGAGTATGAGAAGTTAGACAGAAGCCTTT
CCCGCGAGGTGCAACAACTGAACCAGTGGAAAAGGTTTGCCAACGACTTA
CTTCCCGAGATTGGAGCAACAAAGGGCCAGAAATCGATAGTTCAGCGGCT
TCTCAATGAAAGAAATGCTCTGAGAGCTGAGCTTCAAATCTCAAAGAAAC
AACATACCGCGTGCAAGAAGAAGCTACAGGTTCAGAGCCTTCAACAACAT
GAGCAGCTCTCAGTAATCGACAAGTTCCAGGAGGATTTCGGCCGATTGGA
GGGAGAGCTGAAAGAAGCACAGAGGCTACATAAGGTTGTGGCCGATCTGA
AGCACATTGCTGAATCTGTCCGATCGTTAATCGACAAGTAG
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Coding sequence (CDS) from alignment at tig00000096_pilon:90871..91761-

>Ggra6319.t1 ID=Ggra6319.t1|Name=Ggra6319.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=891bp|location=Sequence derived from alignment at tig00000096_pilon:90871..91761- (Gracilaria gracilis GNS1m male)
ATGAAGCGCTGTGTCCCCCGCCATGGAAATCATGCGAACGCAACTGTCAC
ACAATGCCGCGCCGTCTATGCCTCTTTCGTCGCCCACGTCTATTTACTTC
TTCCTTCTTCCATCCGCAACCTGTCTACTATGAATGCATATTATGCTCAA
GGTAGGACAGCCACGCCATCCTATCCACTGAATCATGTCAACCGAGAACC
AAGAGACACGCAGACTCCGAAAGAGGACGTAGCTGACAGAGCGGCTGTGC
AGGGACCTAATGGAAATGATGATGGTACTGTATACGATGCTGTTGTGGAC
GAGAAAGATGCAATACGACCCGTTCATCGCGCTATTGACAAAGCTGTTGC
CGATGAAGCCACTGTGGATGGCTCTCCTGACGACTACGTTATTGACCATG
CAATAACCCCTGTTCATGGCGCTGCTGATATCGATGCTACACCTGACGGG
CCTAAATCTGACGACAAAGGTGAGGCACACTCGGACGAAGGTGTTCCTTG
GGACATTGAAACGTATGCTGAAGAGTATGAGAAGTTAGACAGAAGCCTTT
CCCGCGAGGTGCAACAACTGAACCAGTGGAAAAGGTTTGCCAACGACTTA
CTTCCCGAGATTGGAGCAACAAAGGGCCAGAAATCGATAGTTCAGCGGCT
TCTCAATGAAAGAAATGCTCTGAGAGCTGAGCTTCAAATCTCAAAGAAAC
AACATACCGCGTGCAAGAAGAAGCTACAGGTTCAGAGCCTTCAACAACAT
GAGCAGCTCTCAGTAATCGACAAGTTCCAGGAGGATTTCGGCCGATTGGA
GGGAGAGCTGAAAGAAGCACAGAGGCTACATAAGGTTGTGGCCGATCTGA
AGCACATTGCTGAATCTGTCCGATCGTTAATCGACAAGTAG
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