Ggra6311.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6311.t1
Unique NameGgra6311.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length123
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:42015..42383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6311Ggra6311Gracilaria gracilis GNS1m malegenetig00000096_pilon 42015..42383 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6311.t1.start1Ggra6311.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000096_pilon 42015..42017 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6311.t1.CDS1Ggra6311.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000096_pilon 42015..42383 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6311.t1.exon1Ggra6311.t1.exon1Gracilaria gracilis GNS1m maleexontig00000096_pilon 42015..42383 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6311.t1.stop1Ggra6311.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000096_pilon 42381..42383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6311.t1Ggra6311.t1Gracilaria gracilis GNS1m malepolypeptidetig00000096_pilon 42015..42383 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6311.t1 ID=Ggra6311.t1|Name=Ggra6311.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=123bp
MTTPMLFTPPQMEGHLQPQQQAGYSANQNPMSSGNVIPESASLDQTEANC
TTQELKHALQSSQNDVEQNLEKLTTHLEKQISMLRSENEKLKNELSSKTS
SLEEVKQALAGLVVKIGTAQND*
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spliced messenger RNA

>Ggra6311.t1 ID=Ggra6311.t1|Name=Ggra6311.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=369bp|location=Sequence derived from alignment at tig00000096_pilon:42015..42383+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTACTCCTATGTTATTTACGCCGCCACAAATGGAAGGACATTTACA
GCCTCAACAACAGGCTGGGTATTCAGCCAACCAGAATCCGATGTCTTCGG
GAAACGTAATACCAGAAAGCGCATCCCTAGACCAGACGGAAGCCAACTGT
ACTACACAAGAGCTTAAGCATGCGTTGCAGTCGTCCCAAAACGATGTGGA
ACAGAACCTCGAGAAGCTTACTACACACCTAGAAAAGCAAATTTCTATGC
TTAGATCGGAAAACGAGAAGCTTAAAAATGAGCTTAGCTCTAAAACAAGC
AGCTTAGAGGAAGTGAAACAAGCTCTGGCAGGTTTGGTCGTCAAGATTGG
AACAGCACAAAACGATTAA
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protein sequence of Ggra6311.t1

>Ggra6311.t1 ID=Ggra6311.t1|Name=Ggra6311.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=123bp
MTTPMLFTPPQMEGHLQPQQQAGYSANQNPMSSGNVIPESASLDQTEANC
TTQELKHALQSSQNDVEQNLEKLTTHLEKQISMLRSENEKLKNELSSKTS
SLEEVKQALAGLVVKIGTAQND*
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mRNA from alignment at tig00000096_pilon:42015..42383+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6311.t1 ID=Ggra6311.t1|Name=Ggra6311.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=369bp|location=Sequence derived from alignment at tig00000096_pilon:42015..42383+ (Gracilaria gracilis GNS1m male)
ATGACTACTCCTATGTTATTTACGCCGCCACAAATGGAAGGACATTTACA
GCCTCAACAACAGGCTGGGTATTCAGCCAACCAGAATCCGATGTCTTCGG
GAAACGTAATACCAGAAAGCGCATCCCTAGACCAGACGGAAGCCAACTGT
ACTACACAAGAGCTTAAGCATGCGTTGCAGTCGTCCCAAAACGATGTGGA
ACAGAACCTCGAGAAGCTTACTACACACCTAGAAAAGCAAATTTCTATGC
TTAGATCGGAAAACGAGAAGCTTAAAAATGAGCTTAGCTCTAAAACAAGC
AGCTTAGAGGAAGTGAAACAAGCTCTGGCAGGTTTGGTCGTCAAGATTGG
AACAGCACAAAACGATTAA
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Coding sequence (CDS) from alignment at tig00000096_pilon:42015..42383+

>Ggra6311.t1 ID=Ggra6311.t1|Name=Ggra6311.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=369bp|location=Sequence derived from alignment at tig00000096_pilon:42015..42383+ (Gracilaria gracilis GNS1m male)
ATGACTACTCCTATGTTATTTACGCCGCCACAAATGGAAGGACATTTACA
GCCTCAACAACAGGCTGGGTATTCAGCCAACCAGAATCCGATGTCTTCGG
GAAACGTAATACCAGAAAGCGCATCCCTAGACCAGACGGAAGCCAACTGT
ACTACACAAGAGCTTAAGCATGCGTTGCAGTCGTCCCAAAACGATGTGGA
ACAGAACCTCGAGAAGCTTACTACACACCTAGAAAAGCAAATTTCTATGC
TTAGATCGGAAAACGAGAAGCTTAAAAATGAGCTTAGCTCTAAAACAAGC
AGCTTAGAGGAAGTGAAACAAGCTCTGGCAGGTTTGGTCGTCAAGATTGG
AACAGCACAAAACGATTAA
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