Ggra6270.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6270.t1
Unique NameGgra6270.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length183
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:378355..378903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6270Ggra6270Gracilaria gracilis GNS1m malegenetig00000879_pilon 378355..378903 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6270.t1.stop1Ggra6270.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000879_pilon 378355..378357 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6270.t1.CDS1Ggra6270.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000879_pilon 378355..378903 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6270.t1.exon1Ggra6270.t1.exon1Gracilaria gracilis GNS1m maleexontig00000879_pilon 378355..378903 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6270.t1.start1Ggra6270.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000879_pilon 378901..378903 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6270.t1Ggra6270.t1Gracilaria gracilis GNS1m malepolypeptidetig00000879_pilon 378355..378903 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6270.t1 ID=Ggra6270.t1|Name=Ggra6270.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=183bp
MGSKQSTSSGGATTPLTCKEIRRSLASEEEAALLDKATHLEIELEQKRRA
FERNKKSIISLPEVSDEEWSEHAKQQVAIVKLGWELQNTEHEIAKKHQVR
LNELRKRRKRNQEVAGQQESLNCKKVKYEPLQTHINPSHRSGVHKVLNCV
ELHGSSSFTAPEGQRRTRNTHGVFSCCLSSAS*
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spliced messenger RNA

>Ggra6270.t1 ID=Ggra6270.t1|Name=Ggra6270.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=549bp|location=Sequence derived from alignment at tig00000879_pilon:378355..378903- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTAGCAAGCAGTCAACCTCATCCGGCGGCGCCACCACTCCTCTCAC
ATGCAAAGAAATTCGCAGGTCGCTGGCGTCCGAGGAAGAGGCCGCACTGC
TCGACAAGGCGACCCACCTAGAAATTGAACTGGAGCAAAAGCGTCGAGCT
TTCGAAAGGAACAAGAAATCTATTATTAGCCTTCCTGAGGTTTCCGATGA
GGAGTGGAGCGAGCACGCCAAACAACAGGTGGCGATTGTGAAGCTTGGCT
GGGAATTACAGAACACGGAACACGAAATTGCAAAAAAGCACCAAGTTCGT
CTCAATGAACTGCGAAAGCGTAGGAAAAGGAATCAAGAAGTTGCTGGACA
ACAGGAATCCCTGAACTGCAAGAAGGTTAAATATGAACCGCTTCAGACCC
ACATCAACCCATCCCATCGAAGCGGCGTGCACAAGGTACTGAATTGTGTC
GAGCTTCATGGGTCCTCGTCATTCACGGCTCCTGAGGGCCAGAGGAGGAC
AAGGAACACCCATGGAGTTTTTAGTTGCTGCCTATCATCAGCCTCATGA
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protein sequence of Ggra6270.t1

>Ggra6270.t1 ID=Ggra6270.t1|Name=Ggra6270.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=183bp
MGSKQSTSSGGATTPLTCKEIRRSLASEEEAALLDKATHLEIELEQKRRA
FERNKKSIISLPEVSDEEWSEHAKQQVAIVKLGWELQNTEHEIAKKHQVR
LNELRKRRKRNQEVAGQQESLNCKKVKYEPLQTHINPSHRSGVHKVLNCV
ELHGSSSFTAPEGQRRTRNTHGVFSCCLSSAS*
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mRNA from alignment at tig00000879_pilon:378355..378903-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6270.t1 ID=Ggra6270.t1|Name=Ggra6270.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=549bp|location=Sequence derived from alignment at tig00000879_pilon:378355..378903- (Gracilaria gracilis GNS1m male)
ATGGGTAGCAAGCAGTCAACCTCATCCGGCGGCGCCACCACTCCTCTCAC
ATGCAAAGAAATTCGCAGGTCGCTGGCGTCCGAGGAAGAGGCCGCACTGC
TCGACAAGGCGACCCACCTAGAAATTGAACTGGAGCAAAAGCGTCGAGCT
TTCGAAAGGAACAAGAAATCTATTATTAGCCTTCCTGAGGTTTCCGATGA
GGAGTGGAGCGAGCACGCCAAACAACAGGTGGCGATTGTGAAGCTTGGCT
GGGAATTACAGAACACGGAACACGAAATTGCAAAAAAGCACCAAGTTCGT
CTCAATGAACTGCGAAAGCGTAGGAAAAGGAATCAAGAAGTTGCTGGACA
ACAGGAATCCCTGAACTGCAAGAAGGTTAAATATGAACCGCTTCAGACCC
ACATCAACCCATCCCATCGAAGCGGCGTGCACAAGGTACTGAATTGTGTC
GAGCTTCATGGGTCCTCGTCATTCACGGCTCCTGAGGGCCAGAGGAGGAC
AAGGAACACCCATGGAGTTTTTAGTTGCTGCCTATCATCAGCCTCATGA
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Coding sequence (CDS) from alignment at tig00000879_pilon:378355..378903-

>Ggra6270.t1 ID=Ggra6270.t1|Name=Ggra6270.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=549bp|location=Sequence derived from alignment at tig00000879_pilon:378355..378903- (Gracilaria gracilis GNS1m male)
ATGGGTAGCAAGCAGTCAACCTCATCCGGCGGCGCCACCACTCCTCTCAC
ATGCAAAGAAATTCGCAGGTCGCTGGCGTCCGAGGAAGAGGCCGCACTGC
TCGACAAGGCGACCCACCTAGAAATTGAACTGGAGCAAAAGCGTCGAGCT
TTCGAAAGGAACAAGAAATCTATTATTAGCCTTCCTGAGGTTTCCGATGA
GGAGTGGAGCGAGCACGCCAAACAACAGGTGGCGATTGTGAAGCTTGGCT
GGGAATTACAGAACACGGAACACGAAATTGCAAAAAAGCACCAAGTTCGT
CTCAATGAACTGCGAAAGCGTAGGAAAAGGAATCAAGAAGTTGCTGGACA
ACAGGAATCCCTGAACTGCAAGAAGGTTAAATATGAACCGCTTCAGACCC
ACATCAACCCATCCCATCGAAGCGGCGTGCACAAGGTACTGAATTGTGTC
GAGCTTCATGGGTCCTCGTCATTCACGGCTCCTGAGGGCCAGAGGAGGAC
AAGGAACACCCATGGAGTTTTTAGTTGCTGCCTATCATCAGCCTCATGA
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