Ggra6225.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6225.t1
Unique NameGgra6225.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length221
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000167_piloncontigtig00000167_pilon:222095..222757 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6225Ggra6225Gracilaria gracilis GNS1m malegenetig00000167_pilon 222095..222757 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6225.t1.start1Ggra6225.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000167_pilon 222095..222097 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6225.t1.CDS1Ggra6225.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000167_pilon 222095..222757 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6225.t1.exon1Ggra6225.t1.exon1Gracilaria gracilis GNS1m maleexontig00000167_pilon 222095..222757 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6225.t1.stop1Ggra6225.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000167_pilon 222755..222757 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6225.t1Ggra6225.t1Gracilaria gracilis GNS1m malepolypeptidetig00000167_pilon 222095..222757 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6225.t1 ID=Ggra6225.t1|Name=Ggra6225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=221bp
MATNTAYEAPQRHSCVPGVDTNLNTSNNADQNLSQELVPGVCTPNSSNRV
RGNLDVDNRLSSAKPGDCVGNVDVDHNGKEGCYEEEIESEVCATVMEKDI
SEKQDDKHDVEGEDFEASEPDSLRKVNVTTTLAQKYRREHEGVIHDGSDH
PELMTDDTQSRVVPYTSGNSAPKSGSGYGGEDNTSCISFHDDHRFVESDA
AYLLCAGSESERGLTIAENE*
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spliced messenger RNA

>Ggra6225.t1 ID=Ggra6225.t1|Name=Ggra6225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=663bp|location=Sequence derived from alignment at tig00000167_pilon:222095..222757+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTACCAACACCGCGTACGAGGCTCCACAGAGACACTCATGCGTTCC
AGGAGTTGATACGAATCTTAATACTTCAAATAATGCAGATCAGAACCTTT
CACAAGAATTAGTACCAGGTGTATGCACTCCGAACTCTAGCAACCGGGTT
AGAGGGAACCTTGATGTTGATAATCGTCTTAGTAGTGCTAAACCTGGAGA
TTGTGTCGGAAATGTGGATGTGGATCACAACGGGAAAGAAGGTTGTTATG
AAGAAGAGATTGAGTCTGAAGTATGCGCTACAGTAATGGAGAAAGATATC
TCTGAGAAACAGGACGACAAACATGACGTTGAAGGCGAGGATTTCGAAGC
ATCTGAACCTGACTCTCTAAGGAAGGTGAATGTAACCACCACACTCGCGC
AGAAATATAGAAGAGAACACGAAGGAGTGATTCACGACGGAAGCGATCAT
CCAGAACTAATGACCGATGACACTCAATCCAGGGTAGTGCCATACACATC
TGGAAATTCCGCCCCCAAATCAGGTTCAGGATATGGTGGGGAGGATAACA
CCTCCTGCATCAGCTTTCACGATGACCATAGATTTGTAGAGAGCGATGCG
GCGTATCTTCTTTGTGCAGGATCTGAATCTGAAAGAGGTCTAACTAtagc
agagaacgagtga
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protein sequence of Ggra6225.t1

>Ggra6225.t1 ID=Ggra6225.t1|Name=Ggra6225.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bp
MATNTAYEAPQRHSCVPGVDTNLNTSNNADQNLSQELVPGVCTPNSSNRV
RGNLDVDNRLSSAKPGDCVGNVDVDHNGKEGCYEEEIESEVCATVMEKDI
SEKQDDKHDVEGEDFEASEPDSLRKVNVTTTLAQKYRREHEGVIHDGSDH
PELMTDDTQSRVVPYTSGNSAPKSGSGYGGEDNTSCISFHDDHRFVESDA
AYLLCAGSESERGLTIAENE*
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mRNA from alignment at tig00000167_pilon:222095..222757+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6225.t1 ID=Ggra6225.t1|Name=Ggra6225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=663bp|location=Sequence derived from alignment at tig00000167_pilon:222095..222757+ (Gracilaria gracilis GNS1m male)
ATGGCTACCAACACCGCGTACGAGGCTCCACAGAGACACTCATGCGTTCC
AGGAGTTGATACGAATCTTAATACTTCAAATAATGCAGATCAGAACCTTT
CACAAGAATTAGTACCAGGTGTATGCACTCCGAACTCTAGCAACCGGGTT
AGAGGGAACCTTGATGTTGATAATCGTCTTAGTAGTGCTAAACCTGGAGA
TTGTGTCGGAAATGTGGATGTGGATCACAACGGGAAAGAAGGTTGTTATG
AAGAAGAGATTGAGTCTGAAGTATGCGCTACAGTAATGGAGAAAGATATC
TCTGAGAAACAGGACGACAAACATGACGTTGAAGGCGAGGATTTCGAAGC
ATCTGAACCTGACTCTCTAAGGAAGGTGAATGTAACCACCACACTCGCGC
AGAAATATAGAAGAGAACACGAAGGAGTGATTCACGACGGAAGCGATCAT
CCAGAACTAATGACCGATGACACTCAATCCAGGGTAGTGCCATACACATC
TGGAAATTCCGCCCCCAAATCAGGTTCAGGATATGGTGGGGAGGATAACA
CCTCCTGCATCAGCTTTCACGATGACCATAGATTTGTAGAGAGCGATGCG
GCGTATCTTCTTTGTGCAGGATCTGAATCTGAAAGAGGTCTAACTAtagc
agagaacgagtga
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Coding sequence (CDS) from alignment at tig00000167_pilon:222095..222757+

>Ggra6225.t1 ID=Ggra6225.t1|Name=Ggra6225.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=663bp|location=Sequence derived from alignment at tig00000167_pilon:222095..222757+ (Gracilaria gracilis GNS1m male)
ATGGCTACCAACACCGCGTACGAGGCTCCACAGAGACACTCATGCGTTCC
AGGAGTTGATACGAATCTTAATACTTCAAATAATGCAGATCAGAACCTTT
CACAAGAATTAGTACCAGGTGTATGCACTCCGAACTCTAGCAACCGGGTT
AGAGGGAACCTTGATGTTGATAATCGTCTTAGTAGTGCTAAACCTGGAGA
TTGTGTCGGAAATGTGGATGTGGATCACAACGGGAAAGAAGGTTGTTATG
AAGAAGAGATTGAGTCTGAAGTATGCGCTACAGTAATGGAGAAAGATATC
TCTGAGAAACAGGACGACAAACATGACGTTGAAGGCGAGGATTTCGAAGC
ATCTGAACCTGACTCTCTAAGGAAGGTGAATGTAACCACCACACTCGCGC
AGAAATATAGAAGAGAACACGAAGGAGTGATTCACGACGGAAGCGATCAT
CCAGAACTAATGACCGATGACACTCAATCCAGGGTAGTGCCATACACATC
TGGAAATTCCGCCCCCAAATCAGGTTCAGGATATGGTGGGGAGGATAACA
CCTCCTGCATCAGCTTTCACGATGACCATAGATTTGTAGAGAGCGATGCG
GCGTATCTTCTTTGTGCAGGATCTGAATCTGAAAGAGGTCTAACTAtagc
agagaacgagtga
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