Ggra6177.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6177.t1
Unique NameGgra6177.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length373
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:900886..902004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6177Ggra6177Gracilaria gracilis GNS1m malegenetig00000045_pilon 900886..902004 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6177.t1.stop1Ggra6177.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000045_pilon 900886..900888 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6177.t1.CDS1Ggra6177.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000045_pilon 900886..902004 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6177.t1.exon1Ggra6177.t1.exon1Gracilaria gracilis GNS1m maleexontig00000045_pilon 900886..902004 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6177.t1.start1Ggra6177.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000045_pilon 902002..902004 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6177.t1Ggra6177.t1Gracilaria gracilis GNS1m malepolypeptidetig00000045_pilon 900886..902004 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6177.t1 ID=Ggra6177.t1|Name=Ggra6177.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=373bp
MDQETNSVDKTQSRDDKNEIDTHVRTAREAAILARKVLDALAQNCDEHTV
SSVQDVNNEQIHSSVLIKSVHHPKTGFEVRNASPGSVLRAELDLLNDAQD
RDSISSEKLEELMSESNTSFVPVVGNSNVLDFVKSIDDINATFCDNSWQQ
KSACGVSNTTEYLRSAKARNGIGNENNTTGHLEALEHLLDGTSEFAIQAQ
SLEFAPFRNAQLASETHRGQELPPHMLKVDLTSCAENSSERKNARARRRA
IARRRTLLRRRAEESFRVQKIMKDLLHLPEEERQKELMKMEHQRRQNERR
RKTEEKRRLGRQAVERCRGKAGLSQKMLEAKFKVMRNENQKLKRVLVHLS
KTGVVSAEELLKYRIVIATHKA*
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spliced messenger RNA

>Ggra6177.t1 ID=Ggra6177.t1|Name=Ggra6177.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000045_pilon:900886..902004- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACCAAGAAACCAACTCTGTTGACAAGACTCAGTCGAGAGACGACAA
GAATGAGATAGACACACATGTCCGTACTGCTCGGGAAGCAGCCATCCTCG
CCAGGAAGGTCCTCGACGCTCTTGCTCAGAACTGTGACGAGCATACCGTA
TCTTCCGTCCAAGACGTCAACAACGAACAAATTCATTCTTCAGTTCTTAT
CAAAAGCGTTCATCACCCAAAAACTGGTTTTGAAGTGAGAAATGCTTCAC
CTGGTTCTGTCCTCCGAGCAGAACTTGATCTTCTTAATGATGCGCAGGAC
AGAGATTCAATTTCATCAGAAAAGCTGGAAGAGCTGATGTCCGAGTCGAA
CACTTCTTTTGTGCCCGTTGTAGGTAATAGTAACGTCCTGGACTTTGTCA
AATCTATTGACGATATCAATGCAACTTTCTGCGACAACAGTTGGCAACAG
AAAAGTGCTTGTGGGGTCTCCAACACTACTGAATACTTGAGAAGCGCAAA
GGCCAGAAATGGAATTGGAAACGAGAACAATACCACAGGCCATTTAGAAG
CACTAGAGCATCTTTTGGATGGGACAAGTGAGTTCGCGATACAAGCACAG
AGTCTTGAGTTCGCTCCCTTCCGAAACGCACAGCTAGCCTCGGAAACCCA
TCGTGGGCAAGAACTCCCTCCACACATGTTGAAAGTCGATTTAACAAGCT
GTGCAGAAAATTCTTCTGAACGGAAAAACGCTAGAGCTCGACGGCGCGCG
ATAGCCCGTCGACGCACACTCCTGAGACGAAGAGCGGAGGAAAGCTTTCG
TGTGCAAAAAATAATGAAAGACTTACTGCACCTTCCTGAAGAAGAGAGAC
AAAAAGAGCTCATGAAAATGGAGCACCAACGACGCCAAAATGAGAGACGA
AGAAAAACGGAAGAAAAACGTCGTCTGGGTCGGCAAGCGGTAGAACGGTG
TCGAGGGAAAGCAGGTCTGAGTCAAAAGATGTTGGAGGCAAAGTTTAAGG
TGATGCGAAATGAAAACCAAAAGCTTAAGCGAGTTCTGGTTCACCTTTCC
AAAACCGGGGTAGTCTCCGCTGAAGAACTTCTGAAGTACAGGATAGTCAT
TGCCACGCACAAGGCATGA
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protein sequence of Ggra6177.t1

>Ggra6177.t1 ID=Ggra6177.t1|Name=Ggra6177.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=373bp
MDQETNSVDKTQSRDDKNEIDTHVRTAREAAILARKVLDALAQNCDEHTV
SSVQDVNNEQIHSSVLIKSVHHPKTGFEVRNASPGSVLRAELDLLNDAQD
RDSISSEKLEELMSESNTSFVPVVGNSNVLDFVKSIDDINATFCDNSWQQ
KSACGVSNTTEYLRSAKARNGIGNENNTTGHLEALEHLLDGTSEFAIQAQ
SLEFAPFRNAQLASETHRGQELPPHMLKVDLTSCAENSSERKNARARRRA
IARRRTLLRRRAEESFRVQKIMKDLLHLPEEERQKELMKMEHQRRQNERR
RKTEEKRRLGRQAVERCRGKAGLSQKMLEAKFKVMRNENQKLKRVLVHLS
KTGVVSAEELLKYRIVIATHKA*
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mRNA from alignment at tig00000045_pilon:900886..902004-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6177.t1 ID=Ggra6177.t1|Name=Ggra6177.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1119bp|location=Sequence derived from alignment at tig00000045_pilon:900886..902004- (Gracilaria gracilis GNS1m male)
ATGGACCAAGAAACCAACTCTGTTGACAAGACTCAGTCGAGAGACGACAA
GAATGAGATAGACACACATGTCCGTACTGCTCGGGAAGCAGCCATCCTCG
CCAGGAAGGTCCTCGACGCTCTTGCTCAGAACTGTGACGAGCATACCGTA
TCTTCCGTCCAAGACGTCAACAACGAACAAATTCATTCTTCAGTTCTTAT
CAAAAGCGTTCATCACCCAAAAACTGGTTTTGAAGTGAGAAATGCTTCAC
CTGGTTCTGTCCTCCGAGCAGAACTTGATCTTCTTAATGATGCGCAGGAC
AGAGATTCAATTTCATCAGAAAAGCTGGAAGAGCTGATGTCCGAGTCGAA
CACTTCTTTTGTGCCCGTTGTAGGTAATAGTAACGTCCTGGACTTTGTCA
AATCTATTGACGATATCAATGCAACTTTCTGCGACAACAGTTGGCAACAG
AAAAGTGCTTGTGGGGTCTCCAACACTACTGAATACTTGAGAAGCGCAAA
GGCCAGAAATGGAATTGGAAACGAGAACAATACCACAGGCCATTTAGAAG
CACTAGAGCATCTTTTGGATGGGACAAGTGAGTTCGCGATACAAGCACAG
AGTCTTGAGTTCGCTCCCTTCCGAAACGCACAGCTAGCCTCGGAAACCCA
TCGTGGGCAAGAACTCCCTCCACACATGTTGAAAGTCGATTTAACAAGCT
GTGCAGAAAATTCTTCTGAACGGAAAAACGCTAGAGCTCGACGGCGCGCG
ATAGCCCGTCGACGCACACTCCTGAGACGAAGAGCGGAGGAAAGCTTTCG
TGTGCAAAAAATAATGAAAGACTTACTGCACCTTCCTGAAGAAGAGAGAC
AAAAAGAGCTCATGAAAATGGAGCACCAACGACGCCAAAATGAGAGACGA
AGAAAAACGGAAGAAAAACGTCGTCTGGGTCGGCAAGCGGTAGAACGGTG
TCGAGGGAAAGCAGGTCTGAGTCAAAAGATGTTGGAGGCAAAGTTTAAGG
TGATGCGAAATGAAAACCAAAAGCTTAAGCGAGTTCTGGTTCACCTTTCC
AAAACCGGGGTAGTCTCCGCTGAAGAACTTCTGAAGTACAGGATAGTCAT
TGCCACGCACAAGGCATGA
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Coding sequence (CDS) from alignment at tig00000045_pilon:900886..902004-

>Ggra6177.t1 ID=Ggra6177.t1|Name=Ggra6177.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1119bp|location=Sequence derived from alignment at tig00000045_pilon:900886..902004- (Gracilaria gracilis GNS1m male)
ATGGACCAAGAAACCAACTCTGTTGACAAGACTCAGTCGAGAGACGACAA
GAATGAGATAGACACACATGTCCGTACTGCTCGGGAAGCAGCCATCCTCG
CCAGGAAGGTCCTCGACGCTCTTGCTCAGAACTGTGACGAGCATACCGTA
TCTTCCGTCCAAGACGTCAACAACGAACAAATTCATTCTTCAGTTCTTAT
CAAAAGCGTTCATCACCCAAAAACTGGTTTTGAAGTGAGAAATGCTTCAC
CTGGTTCTGTCCTCCGAGCAGAACTTGATCTTCTTAATGATGCGCAGGAC
AGAGATTCAATTTCATCAGAAAAGCTGGAAGAGCTGATGTCCGAGTCGAA
CACTTCTTTTGTGCCCGTTGTAGGTAATAGTAACGTCCTGGACTTTGTCA
AATCTATTGACGATATCAATGCAACTTTCTGCGACAACAGTTGGCAACAG
AAAAGTGCTTGTGGGGTCTCCAACACTACTGAATACTTGAGAAGCGCAAA
GGCCAGAAATGGAATTGGAAACGAGAACAATACCACAGGCCATTTAGAAG
CACTAGAGCATCTTTTGGATGGGACAAGTGAGTTCGCGATACAAGCACAG
AGTCTTGAGTTCGCTCCCTTCCGAAACGCACAGCTAGCCTCGGAAACCCA
TCGTGGGCAAGAACTCCCTCCACACATGTTGAAAGTCGATTTAACAAGCT
GTGCAGAAAATTCTTCTGAACGGAAAAACGCTAGAGCTCGACGGCGCGCG
ATAGCCCGTCGACGCACACTCCTGAGACGAAGAGCGGAGGAAAGCTTTCG
TGTGCAAAAAATAATGAAAGACTTACTGCACCTTCCTGAAGAAGAGAGAC
AAAAAGAGCTCATGAAAATGGAGCACCAACGACGCCAAAATGAGAGACGA
AGAAAAACGGAAGAAAAACGTCGTCTGGGTCGGCAAGCGGTAGAACGGTG
TCGAGGGAAAGCAGGTCTGAGTCAAAAGATGTTGGAGGCAAAGTTTAAGG
TGATGCGAAATGAAAACCAAAAGCTTAAGCGAGTTCTGGTTCACCTTTCC
AAAACCGGGGTAGTCTCCGCTGAAGAACTTCTGAAGTACAGGATAGTCAT
TGCCACGCACAAGGCATGA
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