Ggra6018.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6018.t1
Unique NameGgra6018.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length116
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:120950..121297 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6018Ggra6018Gracilaria gracilis GNS1m malegenetig00000045_pilon 120950..121297 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6018.t1.stop1Ggra6018.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000045_pilon 120950..120952 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6018.t1.CDS1Ggra6018.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000045_pilon 120950..121297 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6018.t1.exon1Ggra6018.t1.exon1Gracilaria gracilis GNS1m maleexontig00000045_pilon 120950..121297 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6018.t1.start1Ggra6018.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000045_pilon 121295..121297 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6018.t1Ggra6018.t1Gracilaria gracilis GNS1m malepolypeptidetig00000045_pilon 120950..121297 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6018.t1 ID=Ggra6018.t1|Name=Ggra6018.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=116bp
MTDVVRDARPDLGVAAYNVVLTACARDAARLTHNSAAKALSCALPVPFGV
SCSGATRTSTRVPPRSCTEYATIAIISNSGVAFASIPMTPSFRTLVLPPQ
TLGRVDWLPPPSFSS*
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spliced messenger RNA

>Ggra6018.t1 ID=Ggra6018.t1|Name=Ggra6018.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=348bp|location=Sequence derived from alignment at tig00000045_pilon:120950..121297- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTGACGTGGTTCGCGACGCGAGACCCGATCTTGGTGTTGCGGCCTA
CAACGTCGTGCTCACGGCGTGTGCCAGGGACGCTGCTCGACTCACGCACA
ACTCCGCCGCCAAGGCCTTGTCTTGCGCACTGCCAGTCCCATTTGGAGTC
AGCTGCTCCGGCGCCACTCGCACTTCCACCCGTGTTCCACCCCGATCATG
TACAGAATATGCGACGATTGCAATAATCTCCAACTCGGGCGTCGCATTCG
CCTCCATACCAATGACTCCGTCATTCCGCACTCTCGTCCTGCCTCCCCAA
ACGCTCGGTCGAGTGGACTGGCTACCGCCGCCTTCATTCTCTTCCTAG
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protein sequence of Ggra6018.t1

>Ggra6018.t1 ID=Ggra6018.t1|Name=Ggra6018.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=116bp
MTDVVRDARPDLGVAAYNVVLTACARDAARLTHNSAAKALSCALPVPFGV
SCSGATRTSTRVPPRSCTEYATIAIISNSGVAFASIPMTPSFRTLVLPPQ
TLGRVDWLPPPSFSS*
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mRNA from alignment at tig00000045_pilon:120950..121297-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6018.t1 ID=Ggra6018.t1|Name=Ggra6018.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=348bp|location=Sequence derived from alignment at tig00000045_pilon:120950..121297- (Gracilaria gracilis GNS1m male)
ATGACTGACGTGGTTCGCGACGCGAGACCCGATCTTGGTGTTGCGGCCTA
CAACGTCGTGCTCACGGCGTGTGCCAGGGACGCTGCTCGACTCACGCACA
ACTCCGCCGCCAAGGCCTTGTCTTGCGCACTGCCAGTCCCATTTGGAGTC
AGCTGCTCCGGCGCCACTCGCACTTCCACCCGTGTTCCACCCCGATCATG
TACAGAATATGCGACGATTGCAATAATCTCCAACTCGGGCGTCGCATTCG
CCTCCATACCAATGACTCCGTCATTCCGCACTCTCGTCCTGCCTCCCCAA
ACGCTCGGTCGAGTGGACTGGCTACCGCCGCCTTCATTCTCTTCCTAG
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Coding sequence (CDS) from alignment at tig00000045_pilon:120950..121297-

>Ggra6018.t1 ID=Ggra6018.t1|Name=Ggra6018.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=348bp|location=Sequence derived from alignment at tig00000045_pilon:120950..121297- (Gracilaria gracilis GNS1m male)
ATGACTGACGTGGTTCGCGACGCGAGACCCGATCTTGGTGTTGCGGCCTA
CAACGTCGTGCTCACGGCGTGTGCCAGGGACGCTGCTCGACTCACGCACA
ACTCCGCCGCCAAGGCCTTGTCTTGCGCACTGCCAGTCCCATTTGGAGTC
AGCTGCTCCGGCGCCACTCGCACTTCCACCCGTGTTCCACCCCGATCATG
TACAGAATATGCGACGATTGCAATAATCTCCAACTCGGGCGTCGCATTCG
CCTCCATACCAATGACTCCGTCATTCCGCACTCTCGTCCTGCCTCCCCAA
ACGCTCGGTCGAGTGGACTGGCTACCGCCGCCTTCATTCTCTTCCTAG
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