Ggra6017.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6017.t1
Unique NameGgra6017.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length209
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:64715..65341 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6017Ggra6017Gracilaria gracilis GNS1m malegenetig00000045_pilon 64715..65341 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6017.t1.stop1Ggra6017.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000045_pilon 64715..64717 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6017.t1.CDS1Ggra6017.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000045_pilon 64715..65341 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6017.t1.exon1Ggra6017.t1.exon1Gracilaria gracilis GNS1m maleexontig00000045_pilon 64715..65341 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6017.t1.start1Ggra6017.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000045_pilon 65339..65341 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6017.t1Ggra6017.t1Gracilaria gracilis GNS1m malepolypeptidetig00000045_pilon 64715..65341 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6017.t1 ID=Ggra6017.t1|Name=Ggra6017.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=209bp
MSQALLISVLLMMLFFSRTNAECLKVGSRTDISRMDIDFLSTREHLVVLG
CAKIGRNNSIHFVSGAHELDTDEIRCNATGALEYRDGVFDVFNNNTINAV
LSSYVVGRFCDVEKGVDHCVVLFGNEFVMYISLPIAPILFDENQEFMFAK
TVETFNLLLVPLIANDLARLYSSEITYMLVVRFKLFLQSSDGPFVFENVC
TPVCVVFQ*
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spliced messenger RNA

>Ggra6017.t1 ID=Ggra6017.t1|Name=Ggra6017.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=627bp|location=Sequence derived from alignment at tig00000045_pilon:64715..65341- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGCAGGCACTTCTCATATCAGTCCTACTTATGATGCTGTTTTTCTC
TCGCACGAACGCTGAATGTCTCAAAGTGGGTAGCAGAACTGACATTAGTC
GTATGGACATCGACTTTTTGTCGACAAGAGAGCATCTCGTTGTGCTTGGC
TGCGCTAAGATCGGGCGCAACAACAGCATTCATTTCGTCTCCGGTGCTCA
TGAGTTGGATACAGACGAAATCAGATGCAATGCAACAGGTGCCTTGGAAT
ACCGAGATGGCGTTTTTGATGTATTTAATAACAATACTATCAATGCGGTG
CTATCATCCTATGTAGTGGGAAGATTTTGTGATGTCGAGAAAGGTGTGGA
TCACTGTGTGGTGTTGTTTGGAAATGAATTCGTGATGTACATATCTCTGC
CGATTGCGCCAATTTTGTTTGACGAAAATCAGGAATTTATGTTCGCTAAG
ACAGTAGAGACGTTCAATTTGTTGCTGGTGCCCCTAATTGCCAACGACCT
GGCACGTCTTTACAGTTCTGAAATTACCTACATGCTTGTGGTCAGATTTA
AGTTGTTCCTGCAATCCAGTGATGGTCCATTTGTTTTCGAAAACGTTTGT
ACTCCCGTATGTGTAGTGTTTCAGTAG
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protein sequence of Ggra6017.t1

>Ggra6017.t1 ID=Ggra6017.t1|Name=Ggra6017.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=209bp
MSQALLISVLLMMLFFSRTNAECLKVGSRTDISRMDIDFLSTREHLVVLG
CAKIGRNNSIHFVSGAHELDTDEIRCNATGALEYRDGVFDVFNNNTINAV
LSSYVVGRFCDVEKGVDHCVVLFGNEFVMYISLPIAPILFDENQEFMFAK
TVETFNLLLVPLIANDLARLYSSEITYMLVVRFKLFLQSSDGPFVFENVC
TPVCVVFQ*
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mRNA from alignment at tig00000045_pilon:64715..65341-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6017.t1 ID=Ggra6017.t1|Name=Ggra6017.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=627bp|location=Sequence derived from alignment at tig00000045_pilon:64715..65341- (Gracilaria gracilis GNS1m male)
ATGTCGCAGGCACTTCTCATATCAGTCCTACTTATGATGCTGTTTTTCTC
TCGCACGAACGCTGAATGTCTCAAAGTGGGTAGCAGAACTGACATTAGTC
GTATGGACATCGACTTTTTGTCGACAAGAGAGCATCTCGTTGTGCTTGGC
TGCGCTAAGATCGGGCGCAACAACAGCATTCATTTCGTCTCCGGTGCTCA
TGAGTTGGATACAGACGAAATCAGATGCAATGCAACAGGTGCCTTGGAAT
ACCGAGATGGCGTTTTTGATGTATTTAATAACAATACTATCAATGCGGTG
CTATCATCCTATGTAGTGGGAAGATTTTGTGATGTCGAGAAAGGTGTGGA
TCACTGTGTGGTGTTGTTTGGAAATGAATTCGTGATGTACATATCTCTGC
CGATTGCGCCAATTTTGTTTGACGAAAATCAGGAATTTATGTTCGCTAAG
ACAGTAGAGACGTTCAATTTGTTGCTGGTGCCCCTAATTGCCAACGACCT
GGCACGTCTTTACAGTTCTGAAATTACCTACATGCTTGTGGTCAGATTTA
AGTTGTTCCTGCAATCCAGTGATGGTCCATTTGTTTTCGAAAACGTTTGT
ACTCCCGTATGTGTAGTGTTTCAGTAG
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Coding sequence (CDS) from alignment at tig00000045_pilon:64715..65341-

>Ggra6017.t1 ID=Ggra6017.t1|Name=Ggra6017.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=627bp|location=Sequence derived from alignment at tig00000045_pilon:64715..65341- (Gracilaria gracilis GNS1m male)
ATGTCGCAGGCACTTCTCATATCAGTCCTACTTATGATGCTGTTTTTCTC
TCGCACGAACGCTGAATGTCTCAAAGTGGGTAGCAGAACTGACATTAGTC
GTATGGACATCGACTTTTTGTCGACAAGAGAGCATCTCGTTGTGCTTGGC
TGCGCTAAGATCGGGCGCAACAACAGCATTCATTTCGTCTCCGGTGCTCA
TGAGTTGGATACAGACGAAATCAGATGCAATGCAACAGGTGCCTTGGAAT
ACCGAGATGGCGTTTTTGATGTATTTAATAACAATACTATCAATGCGGTG
CTATCATCCTATGTAGTGGGAAGATTTTGTGATGTCGAGAAAGGTGTGGA
TCACTGTGTGGTGTTGTTTGGAAATGAATTCGTGATGTACATATCTCTGC
CGATTGCGCCAATTTTGTTTGACGAAAATCAGGAATTTATGTTCGCTAAG
ACAGTAGAGACGTTCAATTTGTTGCTGGTGCCCCTAATTGCCAACGACCT
GGCACGTCTTTACAGTTCTGAAATTACCTACATGCTTGTGGTCAGATTTA
AGTTGTTCCTGCAATCCAGTGATGGTCCATTTGTTTTCGAAAACGTTTGT
ACTCCCGTATGTGTAGTGTTTCAGTAG
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