Ggra6010.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6010.t1
Unique NameGgra6010.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length255
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000197_piloncontigtig00000197_pilon:133921..134685 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6010Ggra6010Gracilaria gracilis GNS1m malegenetig00000197_pilon 133921..134685 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6010.t1.stop1Ggra6010.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000197_pilon 133921..133923 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6010.t1.CDS1Ggra6010.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000197_pilon 133921..134685 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6010.t1.exon1Ggra6010.t1.exon1Gracilaria gracilis GNS1m maleexontig00000197_pilon 133921..134685 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6010.t1.start1Ggra6010.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000197_pilon 134683..134685 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6010.t1Ggra6010.t1Gracilaria gracilis GNS1m malepolypeptidetig00000197_pilon 133921..134685 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6010.t1 ID=Ggra6010.t1|Name=Ggra6010.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=255bp
MGWWSQLVSVLNVTFLTVLLLNTAVFLILEVPQAPDHITGEDLTDESTSR
QRPEITRLLLAFLFAVTPLYAILHRNDGHKLYILVAGLSLLPYIALLNNA
VVRALSTLFGAHPSERHAVFGFLVKLSNPIMDLAVVFPLYSLMLTGIAYT
MLKNGSRWFLLKAIFFPFLNAVLAIPACVLASGVMEYPGLMANEGGVGTT
FVFGENMGDTYHSLFGSALMMFFVFPIAVILYTFLLLGTLGYRIYERYVH
VSHT*
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spliced messenger RNA

>Ggra6010.t1 ID=Ggra6010.t1|Name=Ggra6010.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=765bp|location=Sequence derived from alignment at tig00000197_pilon:133921..134685- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGATGGTGGTCACAACTGGTGAGCGTATTGAATGTCACCTTTCTCAC
CGTCCTTCTTCTCAATACAGCTGTCTTCCTAATCCTGGAAGTCCCACAAG
CTCCTGATCACATTACAGGAGAGGATCTCACCGACGAATCCACATCACGC
CAACGGCCGGAAATAACCCGCCTTTTGCTCGCATTCCTGTTTGCTGTAAC
TCCCTTGTACGCTATTCTTCACCGCAATGATGGCCACAAACTCTATATCC
TCGTCGCTGGGTTGTCGCTCCTGCCATACATCGCGCTCCTAAATAATGCC
GTGGTGAGAGCCCTCTCAACTCTGTTTGGGGCGCACCCGAGCGAGCGACA
CGCTGTGTTTGGATTCTTGGTCAAGCTTTCGAACCCAATTATGGACCTCG
CAGTCGTGTTTCCGCTGTACTCACTCATGTTGACGGGGATCGCGTACACG
ATGCTCAAGAATGGCTCCCGATGGTTTCTTCTCAAGGCCATTTTCTTCCC
GTTCCTAAACGCTGTCTTGGCGATCCCAGCATGTGTGCTTGCGAGTGGAG
TGATGGAATATCCCGGGCTGATGGCTAACGAGGGTGGAGTGGGGACGACA
TTTGTATTTGGAGAGAATATGGGTGACACGTATCATTCGCTCTTTGGCTC
CGCTCTGATGATGTTCTTTGTCTTCCCGATCGCGGTTATACTATATACAT
TTCTGCTTCTCGGCACTCTTGGGTATAGGATTTACGAACGGTACGTTCAC
GTGTCCCACACTTGA
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protein sequence of Ggra6010.t1

>Ggra6010.t1 ID=Ggra6010.t1|Name=Ggra6010.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=255bp
MGWWSQLVSVLNVTFLTVLLLNTAVFLILEVPQAPDHITGEDLTDESTSR
QRPEITRLLLAFLFAVTPLYAILHRNDGHKLYILVAGLSLLPYIALLNNA
VVRALSTLFGAHPSERHAVFGFLVKLSNPIMDLAVVFPLYSLMLTGIAYT
MLKNGSRWFLLKAIFFPFLNAVLAIPACVLASGVMEYPGLMANEGGVGTT
FVFGENMGDTYHSLFGSALMMFFVFPIAVILYTFLLLGTLGYRIYERYVH
VSHT*
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mRNA from alignment at tig00000197_pilon:133921..134685-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6010.t1 ID=Ggra6010.t1|Name=Ggra6010.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=765bp|location=Sequence derived from alignment at tig00000197_pilon:133921..134685- (Gracilaria gracilis GNS1m male)
ATGGGATGGTGGTCACAACTGGTGAGCGTATTGAATGTCACCTTTCTCAC
CGTCCTTCTTCTCAATACAGCTGTCTTCCTAATCCTGGAAGTCCCACAAG
CTCCTGATCACATTACAGGAGAGGATCTCACCGACGAATCCACATCACGC
CAACGGCCGGAAATAACCCGCCTTTTGCTCGCATTCCTGTTTGCTGTAAC
TCCCTTGTACGCTATTCTTCACCGCAATGATGGCCACAAACTCTATATCC
TCGTCGCTGGGTTGTCGCTCCTGCCATACATCGCGCTCCTAAATAATGCC
GTGGTGAGAGCCCTCTCAACTCTGTTTGGGGCGCACCCGAGCGAGCGACA
CGCTGTGTTTGGATTCTTGGTCAAGCTTTCGAACCCAATTATGGACCTCG
CAGTCGTGTTTCCGCTGTACTCACTCATGTTGACGGGGATCGCGTACACG
ATGCTCAAGAATGGCTCCCGATGGTTTCTTCTCAAGGCCATTTTCTTCCC
GTTCCTAAACGCTGTCTTGGCGATCCCAGCATGTGTGCTTGCGAGTGGAG
TGATGGAATATCCCGGGCTGATGGCTAACGAGGGTGGAGTGGGGACGACA
TTTGTATTTGGAGAGAATATGGGTGACACGTATCATTCGCTCTTTGGCTC
CGCTCTGATGATGTTCTTTGTCTTCCCGATCGCGGTTATACTATATACAT
TTCTGCTTCTCGGCACTCTTGGGTATAGGATTTACGAACGGTACGTTCAC
GTGTCCCACACTTGA
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Coding sequence (CDS) from alignment at tig00000197_pilon:133921..134685-

>Ggra6010.t1 ID=Ggra6010.t1|Name=Ggra6010.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=765bp|location=Sequence derived from alignment at tig00000197_pilon:133921..134685- (Gracilaria gracilis GNS1m male)
ATGGGATGGTGGTCACAACTGGTGAGCGTATTGAATGTCACCTTTCTCAC
CGTCCTTCTTCTCAATACAGCTGTCTTCCTAATCCTGGAAGTCCCACAAG
CTCCTGATCACATTACAGGAGAGGATCTCACCGACGAATCCACATCACGC
CAACGGCCGGAAATAACCCGCCTTTTGCTCGCATTCCTGTTTGCTGTAAC
TCCCTTGTACGCTATTCTTCACCGCAATGATGGCCACAAACTCTATATCC
TCGTCGCTGGGTTGTCGCTCCTGCCATACATCGCGCTCCTAAATAATGCC
GTGGTGAGAGCCCTCTCAACTCTGTTTGGGGCGCACCCGAGCGAGCGACA
CGCTGTGTTTGGATTCTTGGTCAAGCTTTCGAACCCAATTATGGACCTCG
CAGTCGTGTTTCCGCTGTACTCACTCATGTTGACGGGGATCGCGTACACG
ATGCTCAAGAATGGCTCCCGATGGTTTCTTCTCAAGGCCATTTTCTTCCC
GTTCCTAAACGCTGTCTTGGCGATCCCAGCATGTGTGCTTGCGAGTGGAG
TGATGGAATATCCCGGGCTGATGGCTAACGAGGGTGGAGTGGGGACGACA
TTTGTATTTGGAGAGAATATGGGTGACACGTATCATTCGCTCTTTGGCTC
CGCTCTGATGATGTTCTTTGTCTTCCCGATCGCGGTTATACTATATACAT
TTCTGCTTCTCGGCACTCTTGGGTATAGGATTTACGAACGGTACGTTCAC
GTGTCCCACACTTGA
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