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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 4956.XP_002497687.1 |
| Preferred name | NOP14 |
| PFAMs | Nop14 |
| Max annot lvl | 4751|Fungi |
| KEGG ko | ko:K14766 |
| GOs | GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0030688,GO:0030689,GO:0030692,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904 |
| Evalue | 2.31e-18 |
| EggNOG OGs | KOG2147@1|root,KOG2147@2759|Eukaryota,38BJG@33154|Opisthokonta,3NX37@4751|Fungi,3QP8I@4890|Ascomycota,3RSVB@4891|Saccharomycetes,3RZFT@4893|Saccharomycetaceae |
| Description | to Saccharomyces cerevisiae NOP14 (YDL148C) |
| COG category | A |
| BRITE | ko00000,ko03009 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5962.t1.stop1 | Ggra5962.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000068_pilon 734849..734851 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5962.t1.start1 | Ggra5962.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000068_pilon 737198..737200 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5962.t1 ID=Ggra5962.t1|Name=Ggra5962.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=784bp MPSKRKQSLLRVASKKSTSRPANPFDEQWQKLHRTTERKKLHRKQKPSTN RVFDNRIGEKDPRLDDQSRYLFRLQRERAKRIKKTAHFSLNDDQHSDGEA EPFPSLEHMDEPELSDGDEGSVLDGPPDEDEQPFFSVKQVDDERDQQSQV EPRTKREVMHEVIEKSKMFKTLRQHIKHQTEEQTMQLDEKLPQIMQLLAQ SNSRTPSKKPKLTLKPIASKDTSIFDEEPRQTSGEQKGNQSFRYEDVYQQ LAQEKRAAPSERLLTEEERAQRQKEQLEKMEKLRNARMNNIDDIDDEQRR GVKSSADDLNDDFPAYHTDSEESVEESDSEAEPESAVVESARQSHRDLHA NDLLAVQGDGVKDLPFVYKKAPVSEADLQKLFEGTTVQQRSLIMDRLVKC FAASLNPGKNRPKLIRLSELALQRAVSLCTVNQRFSVALAEIDMLVAYVH KLGFEQVVNAWGRRHVLQSYSALVEGKGSLCERWGTYDVMVLRAVGALFP ASDARHPVSTPLQILLSEALSMERMKSLGDVALGVLVANVLIEMLAQAER FSPQLAVFTKEVLLASAGVGKLSTVLKNSHESSNQGLCLSEVAMILSGSD VEEKVISTKVINAAICFAEELTFSGQVPHADIIFSKLPLDRLSQDIASRM KTICGRARRGRLPLQFYAKSDNKPSFKLRNPRFSSENGVFRKRPRSTYDA ISNGDVAASAKRIHRALKKEERGLARDVRREAELHAAEMAAADSLVREDR DARDKTVRAFFETQRSTWRAAEKRQKKLSGKKW* back to topspliced messenger RNA >Ggra5962.t1 ID=Ggra5962.t1|Name=Ggra5962.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2352bp|location=Sequence derived from alignment at tig00000068_pilon:734849..737200- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCTTCGAAACGCAAGCAATCTTTGTTGCGAGTAGCGTCCAAGAAGTC CACCTCTCGACCTGCAAATCCTTTTGATGAGCAATGGCAGAAGCTCCATC GCACCACCGAAAGAAAGAAGTTGCATCGAAAACAGAAACCTTCGACCAAC CGTGTCTTCGACAATCGCATTGGAGAGAAGGACCCACGTCTAGATGACCA ATCGCGCTACTTGTTCCGGTTGCAACGCGAACGTGCGAAGCGAATCAAGA AAACTGCTCACTTCTCTTTAAATGATGACCAACACAGTGATGGCGAAGCT GAACCATTTCCTTCTCTCGAACACATGGATGAACCGGAACTTTCAGATGG TGATGAAGGTTCAGTGCTTGATGGGCCCCCAGATGAGGATGAACAACCTT TTTTTTCTGTCAAACAAGTTGACGATGAACGCGATCAGCAGTCACAAGTT GAACCTCGCACAAAGAGAGAAGTTATGCACGAAGTAATTGAGAAGAGCAA AATGTTTAAAACATTGCGACAGCATATTAAGCACCAGACTGAAGAGCAGA CAATGCAACTAGATGAGAAGCTCCCTCAGATTATGCAACTTTTGGCCCAA TCCAATTCACGAACTCCTTCGAAGAAACCAAAACTCACGCTGAAGCCCAT TGCTTCTAAGGACACATCGATCTTTGATGAGGAACCCCGCCAAACGTCTG GAGAACAGAAAGGGAACCAGTCCTTCCGATATGAAGATGTGTACCAACAA CTTGCGCAGGAGAAACGCGCAGCACCTTCTGAACGACTTCTTACTGAAGA GGAGAGAGCCCAGCGACAGAAGGAGCAACTAGAGAAGATGGAAAAGCTCC GAAACGCCCGCATGAACAACATTGACGATATTGACGATGAGCAGAGACGT GGAGTCAAATCCAGTGCGGACGATCTGAACGACGATTTTCCTGCCTATCA CACTGATAGTGAAGAATCTGTCGAAGAAAGTGATTCTGAAGCCGAGCCTG AAAGCGCGGTGGTTGAGAGTGCCCGTCAAAGCCATAGAGACCTGCACGCT AATGATTTGCTTGCTGTGCAGGGGGACGGAGTCAAGGATTTACCGTTCGT ATACAAAAAGGCACCCGTCAGTGAGGCTGATCTGCAGAAACTGTTCGAAG GTACCACTGTTCAACAGCGTTCGTTGATAATGGACAGGCTCGTCAAATGT TTTGCGGCTTCCCTTAATCCTGGTAAGAACCGTCCAAAGTTAATCCGTCT GTCAGAACTTGCATTGCAAAGAGCAGTGTCTCTCTGTACGGTGAACCAAC GCTTTTCTGTGGCTCTGGCTGAGATTGATATGCTCGTCGCTTATGTGCAC AAACTTGGGTTTGAACAGGTTGTCAATGCATGGGGGCGTCGGCATGTCTT GCAGTCTTACTCGGCTCTCGTTGAAGGCAAGGGTAGCCTTTGCGAACGGT GGGGGACATATGATGTAATGGTTCTGCGCGCTGTAGGCGCCCTTTTCCCG GCTTCTGATGCACGACATCCCGTATCAACCCCACTGCAGATCCTGTTGTC GGAAGCTCTATCAATGGAGCGAATGAAATCTCTGGGGGACGTTGCCTTAG GGGTACTCGTGGCGAATGTATTGATTGAAATGCTTGCTCAGGCGGAACGC TTCTCTCCACAACTCGCTGTGTTCACGAAAGAAGTTTTGCTCGCTTCTGC TGGAGTTGGGAAGTTGTCCACTGTGCTCAAGAATTCTCATGAATCATCGA ACCAAGGATTATGCTTGTCAGAAGTTGCAATGATTTTATCAGGCTCTGAC GTTGAGGAAAAGGTTATCTCCACCAAAGTAATTAACGCAGCGATATGCTT TGCAGAAGAGCTCACCTTCTCTGGCCAAGTACCCCATGCAGATATAATTT TCTCCAAACTTCCATTAGACAGGCTATCCCAAGACATTGCAAGTCGGATG AAAACCATTTGTGGGAGGGCACGAAGAGGGAGGCTTCCTCTACAGTTCTA CGCAAAGAGCGACAACAAACCATCCTTCAAGCTTAGAAACCCTCGATTTT CGAGCGAGAACGGCGTTTTCCGCAAACGACCAAGGAGCACATATGATGCC ATTTCGAATGGAGACGTTGCTGCTTCCGCAAAAAGAATTCACCGAGCTTT GAAGAAGGAGGAGCGTGGGCTTGCTCGGGATGTTCGAAGGGAAGCAGAGT TGCATGCAGCTGAGATGGCTGCCGCGGACAGTCTTGTTCGAGAAGATCGC GATGCTAGAGATAAGACTGTACGAGCTTTCTTCGAGACGCAACGGTCAAC ATGGAGAGCTGCTGAGAAGCGACAGAAGAAGCTGAGTGGAAAGAAATGGT GA back to topprotein sequence of Ggra5962.t1 >Ggra5962.t1 ID=Ggra5962.t1|Name=Ggra5962.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=784bp
MPSKRKQSLLRVASKKSTSRPANPFDEQWQKLHRTTERKKLHRKQKPSTN RVFDNRIGEKDPRLDDQSRYLFRLQRERAKRIKKTAHFSLNDDQHSDGEA EPFPSLEHMDEPELSDGDEGSVLDGPPDEDEQPFFSVKQVDDERDQQSQV EPRTKREVMHEVIEKSKMFKTLRQHIKHQTEEQTMQLDEKLPQIMQLLAQ SNSRTPSKKPKLTLKPIASKDTSIFDEEPRQTSGEQKGNQSFRYEDVYQQ LAQEKRAAPSERLLTEEERAQRQKEQLEKMEKLRNARMNNIDDIDDEQRR GVKSSADDLNDDFPAYHTDSEESVEESDSEAEPESAVVESARQSHRDLHA NDLLAVQGDGVKDLPFVYKKAPVSEADLQKLFEGTTVQQRSLIMDRLVKC FAASLNPGKNRPKLIRLSELALQRAVSLCTVNQRFSVALAEIDMLVAYVH KLGFEQVVNAWGRRHVLQSYSALVEGKGSLCERWGTYDVMVLRAVGALFP ASDARHPVSTPLQILLSEALSMERMKSLGDVALGVLVANVLIEMLAQAER FSPQLAVFTKEVLLASAGVGKLSTVLKNSHESSNQGLCLSEVAMILSGSD VEEKVISTKVINAAICFAEELTFSGQVPHADIIFSKLPLDRLSQDIASRM KTICGRARRGRLPLQFYAKSDNKPSFKLRNPRFSSENGVFRKRPRSTYDA ISNGDVAASAKRIHRALKKEERGLARDVRREAELHAAEMAAADSLVREDR DARDKTVRAFFETQRSTWRAAEKRQKKLSGKKW* back to topmRNA from alignment at tig00000068_pilon:734849..737200- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5962.t1 ID=Ggra5962.t1|Name=Ggra5962.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2352bp|location=Sequence derived from alignment at tig00000068_pilon:734849..737200- (Gracilaria gracilis GNS1m male) ATGCCTTCGAAACGCAAGCAATCTTTGTTGCGAGTAGCGTCCAAGAAGTC
CACCTCTCGACCTGCAAATCCTTTTGATGAGCAATGGCAGAAGCTCCATC
GCACCACCGAAAGAAAGAAGTTGCATCGAAAACAGAAACCTTCGACCAAC
CGTGTCTTCGACAATCGCATTGGAGAGAAGGACCCACGTCTAGATGACCA
ATCGCGCTACTTGTTCCGGTTGCAACGCGAACGTGCGAAGCGAATCAAGA
AAACTGCTCACTTCTCTTTAAATGATGACCAACACAGTGATGGCGAAGCT
GAACCATTTCCTTCTCTCGAACACATGGATGAACCGGAACTTTCAGATGG
TGATGAAGGTTCAGTGCTTGATGGGCCCCCAGATGAGGATGAACAACCTT
TTTTTTCTGTCAAACAAGTTGACGATGAACGCGATCAGCAGTCACAAGTT
GAACCTCGCACAAAGAGAGAAGTTATGCACGAAGTAATTGAGAAGAGCAA
AATGTTTAAAACATTGCGACAGCATATTAAGCACCAGACTGAAGAGCAGA
CAATGCAACTAGATGAGAAGCTCCCTCAGATTATGCAACTTTTGGCCCAA
TCCAATTCACGAACTCCTTCGAAGAAACCAAAACTCACGCTGAAGCCCAT
TGCTTCTAAGGACACATCGATCTTTGATGAGGAACCCCGCCAAACGTCTG
GAGAACAGAAAGGGAACCAGTCCTTCCGATATGAAGATGTGTACCAACAA
CTTGCGCAGGAGAAACGCGCAGCACCTTCTGAACGACTTCTTACTGAAGA
GGAGAGAGCCCAGCGACAGAAGGAGCAACTAGAGAAGATGGAAAAGCTCC
GAAACGCCCGCATGAACAACATTGACGATATTGACGATGAGCAGAGACGT
GGAGTCAAATCCAGTGCGGACGATCTGAACGACGATTTTCCTGCCTATCA
CACTGATAGTGAAGAATCTGTCGAAGAAAGTGATTCTGAAGCCGAGCCTG
AAAGCGCGGTGGTTGAGAGTGCCCGTCAAAGCCATAGAGACCTGCACGCT
AATGATTTGCTTGCTGTGCAGGGGGACGGAGTCAAGGATTTACCGTTCGT
ATACAAAAAGGCACCCGTCAGTGAGGCTGATCTGCAGAAACTGTTCGAAG
GTACCACTGTTCAACAGCGTTCGTTGATAATGGACAGGCTCGTCAAATGT
TTTGCGGCTTCCCTTAATCCTGGTAAGAACCGTCCAAAGTTAATCCGTCT
GTCAGAACTTGCATTGCAAAGAGCAGTGTCTCTCTGTACGGTGAACCAAC
GCTTTTCTGTGGCTCTGGCTGAGATTGATATGCTCGTCGCTTATGTGCAC
AAACTTGGGTTTGAACAGGTTGTCAATGCATGGGGGCGTCGGCATGTCTT
GCAGTCTTACTCGGCTCTCGTTGAAGGCAAGGGTAGCCTTTGCGAACGGT
GGGGGACATATGATGTAATGGTTCTGCGCGCTGTAGGCGCCCTTTTCCCG
GCTTCTGATGCACGACATCCCGTATCAACCCCACTGCAGATCCTGTTGTC
GGAAGCTCTATCAATGGAGCGAATGAAATCTCTGGGGGACGTTGCCTTAG
GGGTACTCGTGGCGAATGTATTGATTGAAATGCTTGCTCAGGCGGAACGC
TTCTCTCCACAACTCGCTGTGTTCACGAAAGAAGTTTTGCTCGCTTCTGC
TGGAGTTGGGAAGTTGTCCACTGTGCTCAAGAATTCTCATGAATCATCGA
ACCAAGGATTATGCTTGTCAGAAGTTGCAATGATTTTATCAGGCTCTGAC
GTTGAGGAAAAGGTTATCTCCACCAAAGTAATTAACGCAGCGATATGCTT
TGCAGAAGAGCTCACCTTCTCTGGCCAAGTACCCCATGCAGATATAATTT
TCTCCAAACTTCCATTAGACAGGCTATCCCAAGACATTGCAAGTCGGATG
AAAACCATTTGTGGGAGGGCACGAAGAGGGAGGCTTCCTCTACAGTTCTA
CGCAAAGAGCGACAACAAACCATCCTTCAAGCTTAGAAACCCTCGATTTT
CGAGCGAGAACGGCGTTTTCCGCAAACGACCAAGGAGCACATATGATGCC
ATTTCGAATGGAGACGTTGCTGCTTCCGCAAAAAGAATTCACCGAGCTTT
GAAGAAGGAGGAGCGTGGGCTTGCTCGGGATGTTCGAAGGGAAGCAGAGT
TGCATGCAGCTGAGATGGCTGCCGCGGACAGTCTTGTTCGAGAAGATCGC
GATGCTAGAGATAAGACTGTACGAGCTTTCTTCGAGACGCAACGGTCAAC
ATGGAGAGCTGCTGAGAAGCGACAGAAGAAGCTGAGTGGAAAGAAATGGT
GA back to topCoding sequence (CDS) from alignment at tig00000068_pilon:734849..737200- >Ggra5962.t1 ID=Ggra5962.t1|Name=Ggra5962.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2352bp|location=Sequence derived from alignment at tig00000068_pilon:734849..737200- (Gracilaria gracilis GNS1m male) ATGCCTTCGAAACGCAAGCAATCTTTGTTGCGAGTAGCGTCCAAGAAGTC CACCTCTCGACCTGCAAATCCTTTTGATGAGCAATGGCAGAAGCTCCATC GCACCACCGAAAGAAAGAAGTTGCATCGAAAACAGAAACCTTCGACCAAC CGTGTCTTCGACAATCGCATTGGAGAGAAGGACCCACGTCTAGATGACCA ATCGCGCTACTTGTTCCGGTTGCAACGCGAACGTGCGAAGCGAATCAAGA AAACTGCTCACTTCTCTTTAAATGATGACCAACACAGTGATGGCGAAGCT GAACCATTTCCTTCTCTCGAACACATGGATGAACCGGAACTTTCAGATGG TGATGAAGGTTCAGTGCTTGATGGGCCCCCAGATGAGGATGAACAACCTT TTTTTTCTGTCAAACAAGTTGACGATGAACGCGATCAGCAGTCACAAGTT GAACCTCGCACAAAGAGAGAAGTTATGCACGAAGTAATTGAGAAGAGCAA AATGTTTAAAACATTGCGACAGCATATTAAGCACCAGACTGAAGAGCAGA CAATGCAACTAGATGAGAAGCTCCCTCAGATTATGCAACTTTTGGCCCAA TCCAATTCACGAACTCCTTCGAAGAAACCAAAACTCACGCTGAAGCCCAT TGCTTCTAAGGACACATCGATCTTTGATGAGGAACCCCGCCAAACGTCTG GAGAACAGAAAGGGAACCAGTCCTTCCGATATGAAGATGTGTACCAACAA CTTGCGCAGGAGAAACGCGCAGCACCTTCTGAACGACTTCTTACTGAAGA GGAGAGAGCCCAGCGACAGAAGGAGCAACTAGAGAAGATGGAAAAGCTCC GAAACGCCCGCATGAACAACATTGACGATATTGACGATGAGCAGAGACGT GGAGTCAAATCCAGTGCGGACGATCTGAACGACGATTTTCCTGCCTATCA CACTGATAGTGAAGAATCTGTCGAAGAAAGTGATTCTGAAGCCGAGCCTG AAAGCGCGGTGGTTGAGAGTGCCCGTCAAAGCCATAGAGACCTGCACGCT AATGATTTGCTTGCTGTGCAGGGGGACGGAGTCAAGGATTTACCGTTCGT ATACAAAAAGGCACCCGTCAGTGAGGCTGATCTGCAGAAACTGTTCGAAG GTACCACTGTTCAACAGCGTTCGTTGATAATGGACAGGCTCGTCAAATGT TTTGCGGCTTCCCTTAATCCTGGTAAGAACCGTCCAAAGTTAATCCGTCT GTCAGAACTTGCATTGCAAAGAGCAGTGTCTCTCTGTACGGTGAACCAAC GCTTTTCTGTGGCTCTGGCTGAGATTGATATGCTCGTCGCTTATGTGCAC AAACTTGGGTTTGAACAGGTTGTCAATGCATGGGGGCGTCGGCATGTCTT GCAGTCTTACTCGGCTCTCGTTGAAGGCAAGGGTAGCCTTTGCGAACGGT GGGGGACATATGATGTAATGGTTCTGCGCGCTGTAGGCGCCCTTTTCCCG GCTTCTGATGCACGACATCCCGTATCAACCCCACTGCAGATCCTGTTGTC GGAAGCTCTATCAATGGAGCGAATGAAATCTCTGGGGGACGTTGCCTTAG GGGTACTCGTGGCGAATGTATTGATTGAAATGCTTGCTCAGGCGGAACGC TTCTCTCCACAACTCGCTGTGTTCACGAAAGAAGTTTTGCTCGCTTCTGC TGGAGTTGGGAAGTTGTCCACTGTGCTCAAGAATTCTCATGAATCATCGA ACCAAGGATTATGCTTGTCAGAAGTTGCAATGATTTTATCAGGCTCTGAC GTTGAGGAAAAGGTTATCTCCACCAAAGTAATTAACGCAGCGATATGCTT TGCAGAAGAGCTCACCTTCTCTGGCCAAGTACCCCATGCAGATATAATTT TCTCCAAACTTCCATTAGACAGGCTATCCCAAGACATTGCAAGTCGGATG AAAACCATTTGTGGGAGGGCACGAAGAGGGAGGCTTCCTCTACAGTTCTA CGCAAAGAGCGACAACAAACCATCCTTCAAGCTTAGAAACCCTCGATTTT CGAGCGAGAACGGCGTTTTCCGCAAACGACCAAGGAGCACATATGATGCC ATTTCGAATGGAGACGTTGCTGCTTCCGCAAAAAGAATTCACCGAGCTTT GAAGAAGGAGGAGCGTGGGCTTGCTCGGGATGTTCGAAGGGAAGCAGAGT TGCATGCAGCTGAGATGGCTGCCGCGGACAGTCTTGTTCGAGAAGATCGC GATGCTAGAGATAAGACTGTACGAGCTTTCTTCGAGACGCAACGGTCAAC ATGGAGAGCTGCTGAGAAGCGACAGAAGAAGCTGAGTGGAAAGAAATGGT GA back to top
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