Ggra5591.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra5591.t1
Unique Name	Ggra5591.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	592

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000842_pilon	contig	tig00000842_pilon:1054928..1056703 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	10224.XP_006818416.1
Preferred name	GNL1
PFAMs	MMR_HSR1
Max annot lvl	33208\|Metazoa
GOs	GO:0000166,GO:0001882,GO:0001883,GO:0002250,GO:0002252,GO:0002376,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0003674,GO:0003824,GO:0003924,GO:0005198,GO:0005488,GO:0005525,GO:0005575,GO:0005576,GO:0005615,GO:0006950,GO:0006955,GO:0006974,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022613,GO:0023052,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033554,GO:0035639,GO:0036094,GO:0042254,GO:0043167,GO:0043168,GO:0044085,GO:0044421,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363
Evalue	8.94e-109
EggNOG OGs	COG1161@1\|root,KOG1424@2759\|Eukaryota,38D1C@33154\|Opisthokonta,3BDW5@33208\|Metazoa,3CWRQ@33213\|Bilateria
Description	Guanine nucleotide binding protein-like 1
COG category	S

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra5591	Ggra5591	Gracilaria gracilis GNS1m male	gene	tig00000842_pilon 1054928..1056703 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra5591.t1.stop1	Ggra5591.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000842_pilon 1054928..1054930 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra5591.t1.CDS1	Ggra5591.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000842_pilon 1054928..1056703 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra5591.t1.exon1	Ggra5591.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000842_pilon 1054928..1056703 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra5591.t1.start1	Ggra5591.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000842_pilon 1056701..1056703 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra5591.t1	Ggra5591.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000842_pilon 1054928..1056703 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000842_pilon:1054928..1056703-
coding sequence from alignment at tig00000842_pilon:1054928..1056703-

mRNA sequence

>Ggra5591.t1 ID=Ggra5591.t1|Name=Ggra5591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=592bp
MGKKPFSAKQKREQLKQKRLAATSKHPSALPHTSKPSLSTNAASLPALHS
SSSTSNATPRRARGRAPRQNPQRYRLHLSDSPSQNRAHDRHLAFVPLEPH
KLPEMSVPDVRPNGFLMPRRPAWRYEDSIEQLDIRERKALQSWIQSVETD
SYFERNLETWRQLWRVIERSDVLVLVADVRFPALHFVPDLYNHCQELGKG
MVLALNKCDLVSSSLLQAWRSYFERLYPELAIAMFSSYPDAKLRPEDANS
ELLSKRERRMARSKLAAWGADQLLAAIKSLPLDARRRAYLDEWRGQLVES
DDEDVSIVNRRRLGGLSRHINHDSDCSDSEVDTTERRAEGYRVEESRQDG
ARADMITIGFVGHPNAGKSSLINGIFQKKVVSTSRTPGHTKHLQTIFLSE
SVRLCDCPGLVFPGRATRELQILSGMYPISQVREPYASVKYLAERVPLMD
ILGLDVVVNRLEEYVQEEGYISDGWTGWKICEAWALKRGFRTAKAARLDV
FRAANSILRLALDGRIVLATVPPGYVGEQEGEDLFSNKEVPAMVDVNDKS
ESVSASDSDSVSDSDSDSDELSPNVRGSRAGGNVFLLLESE*

spliced messenger RNA

>Ggra5591.t1 ID=Ggra5591.t1|Name=Ggra5591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1776bp|location=Sequence derived from alignment at tig00000842_pilon:1054928..1056703- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCAAGAAACCTTTTTCCGCGAAGCAGAAGCGCGAGCAGCTCAAGCA
GAAGCGTTTGGCTGCTACTTCCAAGCATCCCTCTGCTCTTCCCCATACCT
CCAAACCTTCCCTCTCAACCAACGCAGCCTCTTTGCCAGCCCTCCACTCG
TCGTCCTCAACCTCCAATGCCACGCCACGTCGTGCTCGCGGCCGAGCTCC
CCGCCAGAACCCCCAACGCTACCGTCTTCATCTCTCCGACAGTCCCTCAC
AGAACCGCGCCCATGACCGCCACCTTGCATTCGTTCCTCTGGAACCGCAC
AAGCTGCCAGAGATGTCTGTGCCCGACGTGAGGCCGAACGGTTTCCTCAT
GCCGAGACGACCAGCTTGGAGATACGAAGATAGCATAGAGCAGCTGGACA
TTCGCGAGAGAAAGGCACTGCAATCATGGATACAGTCCGTAGAAACAGAC
TCTTACTTCGAACGAAACTTGGAAACTTGGCGGCAGTTGTGGCGCGTGAT
TGAGCGCTCAGACGTTCTAGTTCTCGTGGCGGACGTACGCTTTCCGGCGT
TGCATTTCGTGCCGGACTTGTACAACCACTGCCAGGAACTTGGCAAAGGT
ATGGTGCTAGCGCTCAACAAGTGTGACCTAGTGTCTAGCTCTCTTTTGCA
GGCGTGGCGCTCTTATTTTGAGCGTCTCTACCCCGAGCTGGCCATCGCAA
TGTTCAGTTCGTACCCGGATGCAAAGCTGCGTCCTGAGGATGCAAACTCG
GAGTTGCTGAGCAAACGCGAGCGGCGGATGGCGCGCTCGAAGCTGGCTGC
TTGGGGAGCTGACCAGTTGCTTGCTGCTATCAAGTCGTTGCCTTTGGATG
CCAGGAGGCGAGCCTACTTGGATGAATGGCGCGGCCAGCTGGTTGAATCT
GATGACGAAGATGTGTCGATTGTGAACAGACGCAGATTGGGAGGTTTGTC
GCGGCACATTAATCATGACAGCGATTGTTCGGACAGCGAGGTGGACACAA
CTGAAAGACGAGCGGAGGGTTACAGAGTAGAAGAATCTCGCCAAGATGGC
GCACGGGCAGATATGATCACGATTGGATTTGTTGGGCACCCTAATGCGGG
CAAGTCTAGTCTAATCAATGGGATTTTTCAGAAGAAGGTTGTGAGCACGA
GTCGCACACCAGGACATACGAAACACTTGCAGACTATTTTCCTGTCAGAG
AGTGTTCGATTGTGTGATTGCCCAGGGTTGGTATTCCCTGGACGAGCAAC
ACGAGAACTACAGATTCTGTCGGGAATGTACCCCATCAGCCAGGTTCGAG
AACCATATGCCAGTGTGAAGTACTTGGCGGAGCGTGTGCCTCTGATGGAT
ATACTGGGCCTGGACGTTGTTGTGAATAGACTGGAGGAATATGTGCAGGA
GGAAGGGTATATTAGCGATGGGTGGACCGGATGGAAAATTTGTGAGGCGT
GGGCGCTCAAGAGGGGATTCCGTACGGCTAAGGCGGCACGACTGGACGTG
TTCAGAGCGGCAAATAGCATCTTGCGGTTGGCGCTTGATGGACGAATTGT
ACTGGCGACGGTGCCGCCGGGATATGTGGGCGAACAGGAAGGCGAGGATT
TGTTTTCAAACAAGGAGGTGCCTGCGATGGTTGATGTGAACGATAAAAGT
GAAAGTGTGAGCGCTAGTGATAGCGATAGCGTTAGCGATAGCGACAGCGA
CAGCGACGAGTTGAGCCCTAATGTTCGTGGCTCGCGCGCCGGTGGCAACG
TCTTCCTGCTGCTCGAGAGCGAATGA

protein sequence of Ggra5591.t1

>Ggra5591.t1 ID=Ggra5591.t1|Name=Ggra5591.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=592bp
MGKKPFSAKQKREQLKQKRLAATSKHPSALPHTSKPSLSTNAASLPALHS
SSSTSNATPRRARGRAPRQNPQRYRLHLSDSPSQNRAHDRHLAFVPLEPH
KLPEMSVPDVRPNGFLMPRRPAWRYEDSIEQLDIRERKALQSWIQSVETD
SYFERNLETWRQLWRVIERSDVLVLVADVRFPALHFVPDLYNHCQELGKG
MVLALNKCDLVSSSLLQAWRSYFERLYPELAIAMFSSYPDAKLRPEDANS
ELLSKRERRMARSKLAAWGADQLLAAIKSLPLDARRRAYLDEWRGQLVES
DDEDVSIVNRRRLGGLSRHINHDSDCSDSEVDTTERRAEGYRVEESRQDG
ARADMITIGFVGHPNAGKSSLINGIFQKKVVSTSRTPGHTKHLQTIFLSE
SVRLCDCPGLVFPGRATRELQILSGMYPISQVREPYASVKYLAERVPLMD
ILGLDVVVNRLEEYVQEEGYISDGWTGWKICEAWALKRGFRTAKAARLDV
FRAANSILRLALDGRIVLATVPPGYVGEQEGEDLFSNKEVPAMVDVNDKS
ESVSASDSDSVSDSDSDSDELSPNVRGSRAGGNVFLLLESE*

mRNA from alignment at tig00000842_pilon:1054928..1056703-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra5591.t1 ID=Ggra5591.t1|Name=Ggra5591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1776bp|location=Sequence derived from alignment at tig00000842_pilon:1054928..1056703- (Gracilaria gracilis GNS1m male)
ATGGGCAAGAAACCTTTTTCCGCGAAGCAGAAGCGCGAGCAGCTCAAGCA
GAAGCGTTTGGCTGCTACTTCCAAGCATCCCTCTGCTCTTCCCCATACCT
CCAAACCTTCCCTCTCAACCAACGCAGCCTCTTTGCCAGCCCTCCACTCG
TCGTCCTCAACCTCCAATGCCACGCCACGTCGTGCTCGCGGCCGAGCTCC
CCGCCAGAACCCCCAACGCTACCGTCTTCATCTCTCCGACAGTCCCTCAC
AGAACCGCGCCCATGACCGCCACCTTGCATTCGTTCCTCTGGAACCGCAC
AAGCTGCCAGAGATGTCTGTGCCCGACGTGAGGCCGAACGGTTTCCTCAT
GCCGAGACGACCAGCTTGGAGATACGAAGATAGCATAGAGCAGCTGGACA
TTCGCGAGAGAAAGGCACTGCAATCATGGATACAGTCCGTAGAAACAGAC
TCTTACTTCGAACGAAACTTGGAAACTTGGCGGCAGTTGTGGCGCGTGAT
TGAGCGCTCAGACGTTCTAGTTCTCGTGGCGGACGTACGCTTTCCGGCGT
TGCATTTCGTGCCGGACTTGTACAACCACTGCCAGGAACTTGGCAAAGGT
ATGGTGCTAGCGCTCAACAAGTGTGACCTAGTGTCTAGCTCTCTTTTGCA
GGCGTGGCGCTCTTATTTTGAGCGTCTCTACCCCGAGCTGGCCATCGCAA
TGTTCAGTTCGTACCCGGATGCAAAGCTGCGTCCTGAGGATGCAAACTCG
GAGTTGCTGAGCAAACGCGAGCGGCGGATGGCGCGCTCGAAGCTGGCTGC
TTGGGGAGCTGACCAGTTGCTTGCTGCTATCAAGTCGTTGCCTTTGGATG
CCAGGAGGCGAGCCTACTTGGATGAATGGCGCGGCCAGCTGGTTGAATCT
GATGACGAAGATGTGTCGATTGTGAACAGACGCAGATTGGGAGGTTTGTC
GCGGCACATTAATCATGACAGCGATTGTTCGGACAGCGAGGTGGACACAA
CTGAAAGACGAGCGGAGGGTTACAGAGTAGAAGAATCTCGCCAAGATGGC
GCACGGGCAGATATGATCACGATTGGATTTGTTGGGCACCCTAATGCGGG
CAAGTCTAGTCTAATCAATGGGATTTTTCAGAAGAAGGTTGTGAGCACGA
GTCGCACACCAGGACATACGAAACACTTGCAGACTATTTTCCTGTCAGAG
AGTGTTCGATTGTGTGATTGCCCAGGGTTGGTATTCCCTGGACGAGCAAC
ACGAGAACTACAGATTCTGTCGGGAATGTACCCCATCAGCCAGGTTCGAG
AACCATATGCCAGTGTGAAGTACTTGGCGGAGCGTGTGCCTCTGATGGAT
ATACTGGGCCTGGACGTTGTTGTGAATAGACTGGAGGAATATGTGCAGGA
GGAAGGGTATATTAGCGATGGGTGGACCGGATGGAAAATTTGTGAGGCGT
GGGCGCTCAAGAGGGGATTCCGTACGGCTAAGGCGGCACGACTGGACGTG
TTCAGAGCGGCAAATAGCATCTTGCGGTTGGCGCTTGATGGACGAATTGT
ACTGGCGACGGTGCCGCCGGGATATGTGGGCGAACAGGAAGGCGAGGATT
TGTTTTCAAACAAGGAGGTGCCTGCGATGGTTGATGTGAACGATAAAAGT
GAAAGTGTGAGCGCTAGTGATAGCGATAGCGTTAGCGATAGCGACAGCGA
CAGCGACGAGTTGAGCCCTAATGTTCGTGGCTCGCGCGCCGGTGGCAACG
TCTTCCTGCTGCTCGAGAGCGAATGA

Coding sequence (CDS) from alignment at tig00000842_pilon:1054928..1056703-

>Ggra5591.t1 ID=Ggra5591.t1|Name=Ggra5591.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1776bp|location=Sequence derived from alignment at tig00000842_pilon:1054928..1056703- (Gracilaria gracilis GNS1m male)
ATGGGCAAGAAACCTTTTTCCGCGAAGCAGAAGCGCGAGCAGCTCAAGCA
GAAGCGTTTGGCTGCTACTTCCAAGCATCCCTCTGCTCTTCCCCATACCT
CCAAACCTTCCCTCTCAACCAACGCAGCCTCTTTGCCAGCCCTCCACTCG
TCGTCCTCAACCTCCAATGCCACGCCACGTCGTGCTCGCGGCCGAGCTCC
CCGCCAGAACCCCCAACGCTACCGTCTTCATCTCTCCGACAGTCCCTCAC
AGAACCGCGCCCATGACCGCCACCTTGCATTCGTTCCTCTGGAACCGCAC
AAGCTGCCAGAGATGTCTGTGCCCGACGTGAGGCCGAACGGTTTCCTCAT
GCCGAGACGACCAGCTTGGAGATACGAAGATAGCATAGAGCAGCTGGACA
TTCGCGAGAGAAAGGCACTGCAATCATGGATACAGTCCGTAGAAACAGAC
TCTTACTTCGAACGAAACTTGGAAACTTGGCGGCAGTTGTGGCGCGTGAT
TGAGCGCTCAGACGTTCTAGTTCTCGTGGCGGACGTACGCTTTCCGGCGT
TGCATTTCGTGCCGGACTTGTACAACCACTGCCAGGAACTTGGCAAAGGT
ATGGTGCTAGCGCTCAACAAGTGTGACCTAGTGTCTAGCTCTCTTTTGCA
GGCGTGGCGCTCTTATTTTGAGCGTCTCTACCCCGAGCTGGCCATCGCAA
TGTTCAGTTCGTACCCGGATGCAAAGCTGCGTCCTGAGGATGCAAACTCG
GAGTTGCTGAGCAAACGCGAGCGGCGGATGGCGCGCTCGAAGCTGGCTGC
TTGGGGAGCTGACCAGTTGCTTGCTGCTATCAAGTCGTTGCCTTTGGATG
CCAGGAGGCGAGCCTACTTGGATGAATGGCGCGGCCAGCTGGTTGAATCT
GATGACGAAGATGTGTCGATTGTGAACAGACGCAGATTGGGAGGTTTGTC
GCGGCACATTAATCATGACAGCGATTGTTCGGACAGCGAGGTGGACACAA
CTGAAAGACGAGCGGAGGGTTACAGAGTAGAAGAATCTCGCCAAGATGGC
GCACGGGCAGATATGATCACGATTGGATTTGTTGGGCACCCTAATGCGGG
CAAGTCTAGTCTAATCAATGGGATTTTTCAGAAGAAGGTTGTGAGCACGA
GTCGCACACCAGGACATACGAAACACTTGCAGACTATTTTCCTGTCAGAG
AGTGTTCGATTGTGTGATTGCCCAGGGTTGGTATTCCCTGGACGAGCAAC
ACGAGAACTACAGATTCTGTCGGGAATGTACCCCATCAGCCAGGTTCGAG
AACCATATGCCAGTGTGAAGTACTTGGCGGAGCGTGTGCCTCTGATGGAT
ATACTGGGCCTGGACGTTGTTGTGAATAGACTGGAGGAATATGTGCAGGA
GGAAGGGTATATTAGCGATGGGTGGACCGGATGGAAAATTTGTGAGGCGT
GGGCGCTCAAGAGGGGATTCCGTACGGCTAAGGCGGCACGACTGGACGTG
TTCAGAGCGGCAAATAGCATCTTGCGGTTGGCGCTTGATGGACGAATTGT
ACTGGCGACGGTGCCGCCGGGATATGTGGGCGAACAGGAAGGCGAGGATT
TGTTTTCAAACAAGGAGGTGCCTGCGATGGTTGATGTGAACGATAAAAGT
GAAAGTGTGAGCGCTAGTGATAGCGATAGCGTTAGCGATAGCGACAGCGA
CAGCGACGAGTTGAGCCCTAATGTTCGTGGCTCGCGCGCCGGTGGCAACG
TCTTCCTGCTGCTCGAGAGCGAATGA