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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 28583.AMAG_01299T0 |
| PFAMs | Peptidase_M1 |
| Max annot lvl | 4751|Fungi |
| Evalue | 4.32e-120 |
| EggNOG OGs | COG0308@1|root,KOG1046@2759|Eukaryota,3AHKZ@33154|Opisthokonta,3PCW3@4751|Fungi |
| Description | Allomyces macrogynus ATCC 38327 |
| COG category | EO |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5498.t1.start1 | Ggra5498.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000842_pilon 601908..601910 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5498.t1.stop1 | Ggra5498.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000842_pilon 604581..604583 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5498.t1 ID=Ggra5498.t1|Name=Ggra5498.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=892bp MPCGAVHLALGADPFTGSYVTPHYQPRLPLRPTHLDFDLRFSIPNRTVHG TVTHSLKAQWHGAHVVTLHAEDFEQVHVTSPEDDMLSFSYDGHLIQAVFS FPLPKDEKVSIVVSYQVVDPIDGLLFSRENEGHWVVSDHETERARYWLPV VDHPSVRTTLSFKLRTSAEEKLTALANGELVSEKIEGMDKVSCWEMKQIT PSYLICVAIGRFVVASGGEQHGKPIKFFGVKGGRHPYTEEDLAFTFGRTK EMIVFMENKVQFELPWPKYYQFCVGDVGGAMENSSLVSYDEWYMLDERSS SERAHRVDSTVVHELAHTWFGDTVVCSDFCHSFLKESFATLISAEWYHYK NGEEEFQNTLTKYAETSFAETMEYVRPIVCRKYESSWSLFDRHLYTNGAW RLHMLRNKLGNDTFWSAVSFYLHKRAWQTVEADDFRRDLEEFSNEQLCSF FDQWFYGKGHPVLEVSFAFDASKGGCAAITVKQVQADEKKGVGLFDVTID VAMEVSSGTWETHTLTMESGASTAQLVEKVPAKPLQLVVDPEKKVLHNLT KLSGVGDDMHVRSLSHAPTFAGRYQSAKFLFESGSRRARAALRDALKKDS HWGIRSAIALWLGKACRKESLPALIDAAFHESDARASPSILSAIGEFREP ESEEALLKYVHEGHDMMRPYGAMGMAIRGLGKMRKVEHLELITKFLEEFR MGGKSFEIPLAAASALGHMCEWKAVEVIMRNSSPPNPNLPNRVRCALLYA LTYGMEFESTANRAKVFDFVERLCKSEERSMVAMAAARVLVSFSDVGNPM NALNELEKRVSAQSKPGIRKLRERARKKLSSLNARAKESAVTIEKMHKDL KELERKVEDLQAKLDAQMITKNVDEKKPNQEKEDGVADGGQ* back to topspliced messenger RNA >Ggra5498.t1 ID=Ggra5498.t1|Name=Ggra5498.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2676bp|location=Sequence derived from alignment at tig00000842_pilon:601908..604583+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCCATGTGGTGCAGTTCATCTGGCTTTAGGCGCAGATCCTTTCACTGG GTCATACGTTACCCCTCACTATCAACCTCGGCTCCCACTGCGCCCGACGC ATTTGGACTTCGATCTGAGGTTCTCCATCCCGAATCGAACTGTGCATGGA ACTGTTACGCATTCACTCAAAGCCCAATGGCATGGTGCACATGTCGTGAC TCTGCACGCCGAAGACTTTGAACAAGTGCATGTTACTTCCCCGGAGGATG ACATGCTCTCGTTTTCTTATGATGGGCATTTGATCCAAGCTGTGTTCAGC TTCCCGTTACCGAAGGATGAGAAGGTATCGATAGTTGTTTCCTACCAGGT GGTCGATCCGATCGATGGCCTGTTATTCAGTCGGGAGAATGAAGGACATT GGGTTGTGTCCGATCATGAAACTGAGCGAGCTCGTTACTGGCTTCCAGTT GTCGATCATCCGAGTGTTCGTACTACTCTTTCGTTCAAGTTAAGAACATC TGCAGAAGAAAAGCTGACTGCCCTCGCAAATGGGGAATTGGTATCTGAAA AGATTGAAGGCATGGACAAGGTTTCATGTTGGGAAATGAAACAAATCACT CCAAGTTACCTGATTTGTGTAGCAATCGGCCGGTTTGTTGTTGCGAGTGG AGGTGAGCAGCATGGTAAGCCCATAAAGTTTTTTGGCGTAAAGGGCGGCC GCCATCCGTACACGGAGGAAGATCTGGCCTTCACCTTCGGTCGGACTAAA GAAATGATAGTTTTCATGGAGAATAAGGTTCAGTTTGAGCTACCATGGCC TAAGTATTACCAGTTCTGTGTCGGTGATGTCGGTGGAGCAATGGAAAACA GCTCATTAGTATCTTACGATGAATGGTACATGTTGGATGAGAGAAGTTCT AGCGAAAGAGCCCATAGAGTTGACAGCACTGTCGTGCATGAACTCGCGCA CACGTGGTTTGGTGACACCGTTGTTTGTTCGGATTTCTGCCATAGTTTCC TCAAGGAGTCATTCGCAACTCTTATATCTGCCGAATGGTATCATTACAAG AATGGAGAGGAAGAGTTTCAGAATACTCTTACGAAGTATGCTGAAACATC ATTTGCTGAGACCATGGAATATGTACGTCCAATTGTTTGTAGGAAGTATG AATCATCATGGTCTCTTTTCGATAGACATTTGTACACCAATGGAGCATGG CGTCTGCACATGCTTCGCAATAAGCTCGGGAATGACACTTTTTGGAGCGC TGTCTCATTCTATCTCCACAAGCGCGCATGGCAAACTGTGGAGGCTGATG ATTTTCGAAGAGATCTCGAGGAATTCTCGAACGAACAACTTTGTTCTTTC TTTGATCAATGGTTTTACGGTAAAGGACATCCAGTGCTAGAGGTTTCATT CGCTTTTGACGCCTCGAAGGGTGGCTGTGCTGCTATTACTGTGAAACAAG TTCAAGCAGACGAGAAGAAGGGTGTCGGTCTTTTTGACGTTACCATCGAT GTGGCAATGGAAGTAAGCTCTGGGACATGGGAGACACACACGCTCACAAT GGAAAGCGGCGCGAGCACAGCCCAGCTTGTTGAGAAAGTTCCGGCGAAAC CGCTTCAATTGGTCGTTGATCCAGAGAAGAAAGTGCTTCATAACCTTACA AAGCTGAGCGGTGTGGGCGATGACATGCATGTCCGTTCTCTCTCCCACGC ACCAACCTTTGCCGGCAGATACCAGTCTGCCAAGTTTCTCTTTGAATCGG GGTCACGTAGAGCCAGAGCCGCACTACGTGACGCTCTGAAGAAGGACAGT CATTGGGGTATAAGATCTGCAATTGCTTTATGGTTGGGCAAAGCATGTAG GAAAGAATCTTTACCAGCACTGATCGATGCTGCGTTCCACGAGTCTGATG CTCGTGCAAGCCCCTCAATCCTCTCCGCTATTGGAGAGTTCCGTGAACCT GAGTCCGAGGAAGCTTTGTTAAAATATGTTCATGAAGGACATGATATGAT GCGCCCATACGGTGCTATGGGCATGGCAATCAGAGGTCTGGGAAAGATGC GTAAGGTTGAGCACTTGGAGCTTATAACGAAGTTCCTCGAGGAATTCCGT ATGGGTGGCAAGAGCTTTGAAATACCGCTTGCAGCCGCAAGCGCTCTAGG ACATATGTGTGAGTGGAAAGCGGTAGAAGTGATCATGAGGAATTCCAGCC CTCCTAACCCAAATCTTCCAAACAGAGTCCGGTGCGCCCTATTGTATGCG TTGACGTACGGAATGGAATTCGAAAGCACTGCGAATCGTGCCAAAGTGTT TGACTTTGTTGAGAGGTTGTGTAAGAGTGAAGAGCGAAGCATGGTTGCTA TGGCGGCGGCGAGAGTATTGGTCTCATTCTCAGACGTAGGAAATCCCATG AACGCATTGAATGAGTTGGAGAAAAGAGTAAGTGCGCAATCCAAACCGGG AATACGGAAGTTGAGAGAACGGGCGAGAAAGAAGCTGAGCAGCCTGAACG CCAGAGCGAAAGAAAGTGCGGTAACCATTGAGAAAATGCATAAGGATTTG AAAGAGTTGGAAAGAAAGGTGGAAGACCTTCAGGCTAAGTTAGATGCGCA GATGATTACAAAAAATGTGGATGAGAAGAAGCCGAATCAAGAGAAGGAGG ACGGTGTTGCCGATGGTGGGCAATGA back to topprotein sequence of Ggra5498.t1 >Ggra5498.t1 ID=Ggra5498.t1|Name=Ggra5498.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=892bp
MPCGAVHLALGADPFTGSYVTPHYQPRLPLRPTHLDFDLRFSIPNRTVHG TVTHSLKAQWHGAHVVTLHAEDFEQVHVTSPEDDMLSFSYDGHLIQAVFS FPLPKDEKVSIVVSYQVVDPIDGLLFSRENEGHWVVSDHETERARYWLPV VDHPSVRTTLSFKLRTSAEEKLTALANGELVSEKIEGMDKVSCWEMKQIT PSYLICVAIGRFVVASGGEQHGKPIKFFGVKGGRHPYTEEDLAFTFGRTK EMIVFMENKVQFELPWPKYYQFCVGDVGGAMENSSLVSYDEWYMLDERSS SERAHRVDSTVVHELAHTWFGDTVVCSDFCHSFLKESFATLISAEWYHYK NGEEEFQNTLTKYAETSFAETMEYVRPIVCRKYESSWSLFDRHLYTNGAW RLHMLRNKLGNDTFWSAVSFYLHKRAWQTVEADDFRRDLEEFSNEQLCSF FDQWFYGKGHPVLEVSFAFDASKGGCAAITVKQVQADEKKGVGLFDVTID VAMEVSSGTWETHTLTMESGASTAQLVEKVPAKPLQLVVDPEKKVLHNLT KLSGVGDDMHVRSLSHAPTFAGRYQSAKFLFESGSRRARAALRDALKKDS HWGIRSAIALWLGKACRKESLPALIDAAFHESDARASPSILSAIGEFREP ESEEALLKYVHEGHDMMRPYGAMGMAIRGLGKMRKVEHLELITKFLEEFR MGGKSFEIPLAAASALGHMCEWKAVEVIMRNSSPPNPNLPNRVRCALLYA LTYGMEFESTANRAKVFDFVERLCKSEERSMVAMAAARVLVSFSDVGNPM NALNELEKRVSAQSKPGIRKLRERARKKLSSLNARAKESAVTIEKMHKDL KELERKVEDLQAKLDAQMITKNVDEKKPNQEKEDGVADGGQ* back to topmRNA from alignment at tig00000842_pilon:601908..604583+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5498.t1 ID=Ggra5498.t1|Name=Ggra5498.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2676bp|location=Sequence derived from alignment at tig00000842_pilon:601908..604583+ (Gracilaria gracilis GNS1m male) ATGCCATGTGGTGCAGTTCATCTGGCTTTAGGCGCAGATCCTTTCACTGG
GTCATACGTTACCCCTCACTATCAACCTCGGCTCCCACTGCGCCCGACGC
ATTTGGACTTCGATCTGAGGTTCTCCATCCCGAATCGAACTGTGCATGGA
ACTGTTACGCATTCACTCAAAGCCCAATGGCATGGTGCACATGTCGTGAC
TCTGCACGCCGAAGACTTTGAACAAGTGCATGTTACTTCCCCGGAGGATG
ACATGCTCTCGTTTTCTTATGATGGGCATTTGATCCAAGCTGTGTTCAGC
TTCCCGTTACCGAAGGATGAGAAGGTATCGATAGTTGTTTCCTACCAGGT
GGTCGATCCGATCGATGGCCTGTTATTCAGTCGGGAGAATGAAGGACATT
GGGTTGTGTCCGATCATGAAACTGAGCGAGCTCGTTACTGGCTTCCAGTT
GTCGATCATCCGAGTGTTCGTACTACTCTTTCGTTCAAGTTAAGAACATC
TGCAGAAGAAAAGCTGACTGCCCTCGCAAATGGGGAATTGGTATCTGAAA
AGATTGAAGGCATGGACAAGGTTTCATGTTGGGAAATGAAACAAATCACT
CCAAGTTACCTGATTTGTGTAGCAATCGGCCGGTTTGTTGTTGCGAGTGG
AGGTGAGCAGCATGGTAAGCCCATAAAGTTTTTTGGCGTAAAGGGCGGCC
GCCATCCGTACACGGAGGAAGATCTGGCCTTCACCTTCGGTCGGACTAAA
GAAATGATAGTTTTCATGGAGAATAAGGTTCAGTTTGAGCTACCATGGCC
TAAGTATTACCAGTTCTGTGTCGGTGATGTCGGTGGAGCAATGGAAAACA
GCTCATTAGTATCTTACGATGAATGGTACATGTTGGATGAGAGAAGTTCT
AGCGAAAGAGCCCATAGAGTTGACAGCACTGTCGTGCATGAACTCGCGCA
CACGTGGTTTGGTGACACCGTTGTTTGTTCGGATTTCTGCCATAGTTTCC
TCAAGGAGTCATTCGCAACTCTTATATCTGCCGAATGGTATCATTACAAG
AATGGAGAGGAAGAGTTTCAGAATACTCTTACGAAGTATGCTGAAACATC
ATTTGCTGAGACCATGGAATATGTACGTCCAATTGTTTGTAGGAAGTATG
AATCATCATGGTCTCTTTTCGATAGACATTTGTACACCAATGGAGCATGG
CGTCTGCACATGCTTCGCAATAAGCTCGGGAATGACACTTTTTGGAGCGC
TGTCTCATTCTATCTCCACAAGCGCGCATGGCAAACTGTGGAGGCTGATG
ATTTTCGAAGAGATCTCGAGGAATTCTCGAACGAACAACTTTGTTCTTTC
TTTGATCAATGGTTTTACGGTAAAGGACATCCAGTGCTAGAGGTTTCATT
CGCTTTTGACGCCTCGAAGGGTGGCTGTGCTGCTATTACTGTGAAACAAG
TTCAAGCAGACGAGAAGAAGGGTGTCGGTCTTTTTGACGTTACCATCGAT
GTGGCAATGGAAGTAAGCTCTGGGACATGGGAGACACACACGCTCACAAT
GGAAAGCGGCGCGAGCACAGCCCAGCTTGTTGAGAAAGTTCCGGCGAAAC
CGCTTCAATTGGTCGTTGATCCAGAGAAGAAAGTGCTTCATAACCTTACA
AAGCTGAGCGGTGTGGGCGATGACATGCATGTCCGTTCTCTCTCCCACGC
ACCAACCTTTGCCGGCAGATACCAGTCTGCCAAGTTTCTCTTTGAATCGG
GGTCACGTAGAGCCAGAGCCGCACTACGTGACGCTCTGAAGAAGGACAGT
CATTGGGGTATAAGATCTGCAATTGCTTTATGGTTGGGCAAAGCATGTAG
GAAAGAATCTTTACCAGCACTGATCGATGCTGCGTTCCACGAGTCTGATG
CTCGTGCAAGCCCCTCAATCCTCTCCGCTATTGGAGAGTTCCGTGAACCT
GAGTCCGAGGAAGCTTTGTTAAAATATGTTCATGAAGGACATGATATGAT
GCGCCCATACGGTGCTATGGGCATGGCAATCAGAGGTCTGGGAAAGATGC
GTAAGGTTGAGCACTTGGAGCTTATAACGAAGTTCCTCGAGGAATTCCGT
ATGGGTGGCAAGAGCTTTGAAATACCGCTTGCAGCCGCAAGCGCTCTAGG
ACATATGTGTGAGTGGAAAGCGGTAGAAGTGATCATGAGGAATTCCAGCC
CTCCTAACCCAAATCTTCCAAACAGAGTCCGGTGCGCCCTATTGTATGCG
TTGACGTACGGAATGGAATTCGAAAGCACTGCGAATCGTGCCAAAGTGTT
TGACTTTGTTGAGAGGTTGTGTAAGAGTGAAGAGCGAAGCATGGTTGCTA
TGGCGGCGGCGAGAGTATTGGTCTCATTCTCAGACGTAGGAAATCCCATG
AACGCATTGAATGAGTTGGAGAAAAGAGTAAGTGCGCAATCCAAACCGGG
AATACGGAAGTTGAGAGAACGGGCGAGAAAGAAGCTGAGCAGCCTGAACG
CCAGAGCGAAAGAAAGTGCGGTAACCATTGAGAAAATGCATAAGGATTTG
AAAGAGTTGGAAAGAAAGGTGGAAGACCTTCAGGCTAAGTTAGATGCGCA
GATGATTACAAAAAATGTGGATGAGAAGAAGCCGAATCAAGAGAAGGAGG
ACGGTGTTGCCGATGGTGGGCAATGA back to topCoding sequence (CDS) from alignment at tig00000842_pilon:601908..604583+ >Ggra5498.t1 ID=Ggra5498.t1|Name=Ggra5498.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2676bp|location=Sequence derived from alignment at tig00000842_pilon:601908..604583+ (Gracilaria gracilis GNS1m male) ATGCCATGTGGTGCAGTTCATCTGGCTTTAGGCGCAGATCCTTTCACTGG GTCATACGTTACCCCTCACTATCAACCTCGGCTCCCACTGCGCCCGACGC ATTTGGACTTCGATCTGAGGTTCTCCATCCCGAATCGAACTGTGCATGGA ACTGTTACGCATTCACTCAAAGCCCAATGGCATGGTGCACATGTCGTGAC TCTGCACGCCGAAGACTTTGAACAAGTGCATGTTACTTCCCCGGAGGATG ACATGCTCTCGTTTTCTTATGATGGGCATTTGATCCAAGCTGTGTTCAGC TTCCCGTTACCGAAGGATGAGAAGGTATCGATAGTTGTTTCCTACCAGGT GGTCGATCCGATCGATGGCCTGTTATTCAGTCGGGAGAATGAAGGACATT GGGTTGTGTCCGATCATGAAACTGAGCGAGCTCGTTACTGGCTTCCAGTT GTCGATCATCCGAGTGTTCGTACTACTCTTTCGTTCAAGTTAAGAACATC TGCAGAAGAAAAGCTGACTGCCCTCGCAAATGGGGAATTGGTATCTGAAA AGATTGAAGGCATGGACAAGGTTTCATGTTGGGAAATGAAACAAATCACT CCAAGTTACCTGATTTGTGTAGCAATCGGCCGGTTTGTTGTTGCGAGTGG AGGTGAGCAGCATGGTAAGCCCATAAAGTTTTTTGGCGTAAAGGGCGGCC GCCATCCGTACACGGAGGAAGATCTGGCCTTCACCTTCGGTCGGACTAAA GAAATGATAGTTTTCATGGAGAATAAGGTTCAGTTTGAGCTACCATGGCC TAAGTATTACCAGTTCTGTGTCGGTGATGTCGGTGGAGCAATGGAAAACA GCTCATTAGTATCTTACGATGAATGGTACATGTTGGATGAGAGAAGTTCT AGCGAAAGAGCCCATAGAGTTGACAGCACTGTCGTGCATGAACTCGCGCA CACGTGGTTTGGTGACACCGTTGTTTGTTCGGATTTCTGCCATAGTTTCC TCAAGGAGTCATTCGCAACTCTTATATCTGCCGAATGGTATCATTACAAG AATGGAGAGGAAGAGTTTCAGAATACTCTTACGAAGTATGCTGAAACATC ATTTGCTGAGACCATGGAATATGTACGTCCAATTGTTTGTAGGAAGTATG AATCATCATGGTCTCTTTTCGATAGACATTTGTACACCAATGGAGCATGG CGTCTGCACATGCTTCGCAATAAGCTCGGGAATGACACTTTTTGGAGCGC TGTCTCATTCTATCTCCACAAGCGCGCATGGCAAACTGTGGAGGCTGATG ATTTTCGAAGAGATCTCGAGGAATTCTCGAACGAACAACTTTGTTCTTTC TTTGATCAATGGTTTTACGGTAAAGGACATCCAGTGCTAGAGGTTTCATT CGCTTTTGACGCCTCGAAGGGTGGCTGTGCTGCTATTACTGTGAAACAAG TTCAAGCAGACGAGAAGAAGGGTGTCGGTCTTTTTGACGTTACCATCGAT GTGGCAATGGAAGTAAGCTCTGGGACATGGGAGACACACACGCTCACAAT GGAAAGCGGCGCGAGCACAGCCCAGCTTGTTGAGAAAGTTCCGGCGAAAC CGCTTCAATTGGTCGTTGATCCAGAGAAGAAAGTGCTTCATAACCTTACA AAGCTGAGCGGTGTGGGCGATGACATGCATGTCCGTTCTCTCTCCCACGC ACCAACCTTTGCCGGCAGATACCAGTCTGCCAAGTTTCTCTTTGAATCGG GGTCACGTAGAGCCAGAGCCGCACTACGTGACGCTCTGAAGAAGGACAGT CATTGGGGTATAAGATCTGCAATTGCTTTATGGTTGGGCAAAGCATGTAG GAAAGAATCTTTACCAGCACTGATCGATGCTGCGTTCCACGAGTCTGATG CTCGTGCAAGCCCCTCAATCCTCTCCGCTATTGGAGAGTTCCGTGAACCT GAGTCCGAGGAAGCTTTGTTAAAATATGTTCATGAAGGACATGATATGAT GCGCCCATACGGTGCTATGGGCATGGCAATCAGAGGTCTGGGAAAGATGC GTAAGGTTGAGCACTTGGAGCTTATAACGAAGTTCCTCGAGGAATTCCGT ATGGGTGGCAAGAGCTTTGAAATACCGCTTGCAGCCGCAAGCGCTCTAGG ACATATGTGTGAGTGGAAAGCGGTAGAAGTGATCATGAGGAATTCCAGCC CTCCTAACCCAAATCTTCCAAACAGAGTCCGGTGCGCCCTATTGTATGCG TTGACGTACGGAATGGAATTCGAAAGCACTGCGAATCGTGCCAAAGTGTT TGACTTTGTTGAGAGGTTGTGTAAGAGTGAAGAGCGAAGCATGGTTGCTA TGGCGGCGGCGAGAGTATTGGTCTCATTCTCAGACGTAGGAAATCCCATG AACGCATTGAATGAGTTGGAGAAAAGAGTAAGTGCGCAATCCAAACCGGG AATACGGAAGTTGAGAGAACGGGCGAGAAAGAAGCTGAGCAGCCTGAACG CCAGAGCGAAAGAAAGTGCGGTAACCATTGAGAAAATGCATAAGGATTTG AAAGAGTTGGAAAGAAAGGTGGAAGACCTTCAGGCTAAGTTAGATGCGCA GATGATTACAAAAAATGTGGATGAGAAGAAGCCGAATCAAGAGAAGGAGG ACGGTGTTGCCGATGGTGGGCAATGA back to top
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