Ggra5390.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5390.t1
Unique NameGgra5390.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length357
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000099_piloncontigtig00000099_pilon:113430..114500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5390Ggra5390Gracilaria gracilis GNS1m malegenetig00000099_pilon 113430..114500 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5390.t1.start1Ggra5390.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000099_pilon 113430..113432 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5390.t1.CDS1Ggra5390.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000099_pilon 113430..114500 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5390.t1.exon1Ggra5390.t1.exon1Gracilaria gracilis GNS1m maleexontig00000099_pilon 113430..114500 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5390.t1.stop1Ggra5390.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000099_pilon 114498..114500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5390.t1Ggra5390.t1Gracilaria gracilis GNS1m malepolypeptidetig00000099_pilon 113430..114500 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5390.t1 ID=Ggra5390.t1|Name=Ggra5390.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=357bp
MVWCTENWTSAASQNETEVGKKNGKDSAMLAGVLRDEDKHEDVRRASIET
EANGRSNEEENVRAIQDSCGRRKYRQELVELVVQIVGREHSYRQDSEKSR
ELLDKFCWSDVALARDRLFLRGVLIYRDERDNGSGSFVATKKGGGNGYLS
MLRDEDEVSTRWMAEIYKAENEVCWEKSKLREAVCDRAEASVSNVATNLL
TKKMFFMNDGVCMMARMSKSSASKEAIRLAVKRVENDWTWDVKRKRRNGV
RSELKSEARRRLLCAIGESGSRGKLLSELLELIKARNDEERAAAVWGLQA
LLRDGCIHRFVVEQGDVSDEQFGAWHGVGAVVSRSHCEALVVQQDVWPKS
NKAVAW*
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spliced messenger RNA

>Ggra5390.t1 ID=Ggra5390.t1|Name=Ggra5390.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1071bp|location=Sequence derived from alignment at tig00000099_pilon:113430..114500+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTTGGTGTACGGAGAACTGGACGAGCGCTGCAAGTCAAAATGAGAC
CGAAGTGGGCAAGAAGAACGGCAAGGATAGTGCAATGTTAGCGGGAGTTT
TGAGGGATGAAGACAAGCACGAGGACGTACGGCGTGCAAGTATCGAAACT
GAGGCTAACGGGCGCAGCAATGAAGAAGAAAACGTGAGGGCGATACAAGA
CAGCTGCGGGCGTCGAAAGTATAGACAAGAACTGGTTGAGCTGGTTGTAC
AAATCGTGGGACGGGAACACAGTTATAGACAAGACAGCGAGAAAAGTCGG
GAGCTGTTGGATAAGTTTTGCTGGAGTGATGTTGCTCTGGCAAGGGACAG
ACTTTTTCTTCGTGGGGTGCTTATTTACAGGGATGAGAGAGATAATGGTA
GTGGGAGCTTCGTGGCTACGAAGAAAGGAGGCGGCAATGGGTACTTGAGC
ATGCTAAGAGACGAGGATGAAGTGAGCACGAGATGGATGGCGGAAATTTA
CAAGGCGGAGAACGAAGTGTGCTGGGAGAAAAGCAAGCTGAGAGAGGCGG
TTTGTGACAGAGCAGAGGCGTCTGTTTCCAATGTGGCCACTAACTTACTG
ACGAAGAAGATGTTCTTTATGAACGACGGGGTGTGCATGATGGCAAGAAT
GTCGAAGAGCAGCGCGAGCAAGGAGGCGATACGATTAGCTGTGAAGCGCG
TAGAAAACGACTGGACTTGGGATGTGAAACGCAAGCGGCGTAATGGAGTA
CGAAGCGAACTGAAGAGCGAAGCACGACGACGACTGCTGTGCGCAATCGG
GGAGAGCGGAAGCAGGGGGAAACTATTGAGCGAGCTGCTGGAGCTGATAA
AGGCGCGAAACGACGAGGAAAGGGCGGCAGCGGTGTGGGGTCTACAAGCG
CTGCTTCGCGACGGATGCATACATCGGTTCGTGGTGGAGCAAGGCGACGT
GAGCGACGAGCAGTTTGGTGCGTGGCACGGGGTGGGTGCTGTCGTGAGCC
GCAGCCATTGCGAGGCGCTGGTGGTACAACAAGACGTGTGGCCGAAGAGC
AACAAGGCGGTGGCGTGGTAG
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protein sequence of Ggra5390.t1

>Ggra5390.t1 ID=Ggra5390.t1|Name=Ggra5390.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=357bp
MVWCTENWTSAASQNETEVGKKNGKDSAMLAGVLRDEDKHEDVRRASIET
EANGRSNEEENVRAIQDSCGRRKYRQELVELVVQIVGREHSYRQDSEKSR
ELLDKFCWSDVALARDRLFLRGVLIYRDERDNGSGSFVATKKGGGNGYLS
MLRDEDEVSTRWMAEIYKAENEVCWEKSKLREAVCDRAEASVSNVATNLL
TKKMFFMNDGVCMMARMSKSSASKEAIRLAVKRVENDWTWDVKRKRRNGV
RSELKSEARRRLLCAIGESGSRGKLLSELLELIKARNDEERAAAVWGLQA
LLRDGCIHRFVVEQGDVSDEQFGAWHGVGAVVSRSHCEALVVQQDVWPKS
NKAVAW*
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mRNA from alignment at tig00000099_pilon:113430..114500+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5390.t1 ID=Ggra5390.t1|Name=Ggra5390.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1071bp|location=Sequence derived from alignment at tig00000099_pilon:113430..114500+ (Gracilaria gracilis GNS1m male)
ATGGTTTGGTGTACGGAGAACTGGACGAGCGCTGCAAGTCAAAATGAGAC
CGAAGTGGGCAAGAAGAACGGCAAGGATAGTGCAATGTTAGCGGGAGTTT
TGAGGGATGAAGACAAGCACGAGGACGTACGGCGTGCAAGTATCGAAACT
GAGGCTAACGGGCGCAGCAATGAAGAAGAAAACGTGAGGGCGATACAAGA
CAGCTGCGGGCGTCGAAAGTATAGACAAGAACTGGTTGAGCTGGTTGTAC
AAATCGTGGGACGGGAACACAGTTATAGACAAGACAGCGAGAAAAGTCGG
GAGCTGTTGGATAAGTTTTGCTGGAGTGATGTTGCTCTGGCAAGGGACAG
ACTTTTTCTTCGTGGGGTGCTTATTTACAGGGATGAGAGAGATAATGGTA
GTGGGAGCTTCGTGGCTACGAAGAAAGGAGGCGGCAATGGGTACTTGAGC
ATGCTAAGAGACGAGGATGAAGTGAGCACGAGATGGATGGCGGAAATTTA
CAAGGCGGAGAACGAAGTGTGCTGGGAGAAAAGCAAGCTGAGAGAGGCGG
TTTGTGACAGAGCAGAGGCGTCTGTTTCCAATGTGGCCACTAACTTACTG
ACGAAGAAGATGTTCTTTATGAACGACGGGGTGTGCATGATGGCAAGAAT
GTCGAAGAGCAGCGCGAGCAAGGAGGCGATACGATTAGCTGTGAAGCGCG
TAGAAAACGACTGGACTTGGGATGTGAAACGCAAGCGGCGTAATGGAGTA
CGAAGCGAACTGAAGAGCGAAGCACGACGACGACTGCTGTGCGCAATCGG
GGAGAGCGGAAGCAGGGGGAAACTATTGAGCGAGCTGCTGGAGCTGATAA
AGGCGCGAAACGACGAGGAAAGGGCGGCAGCGGTGTGGGGTCTACAAGCG
CTGCTTCGCGACGGATGCATACATCGGTTCGTGGTGGAGCAAGGCGACGT
GAGCGACGAGCAGTTTGGTGCGTGGCACGGGGTGGGTGCTGTCGTGAGCC
GCAGCCATTGCGAGGCGCTGGTGGTACAACAAGACGTGTGGCCGAAGAGC
AACAAGGCGGTGGCGTGGTAG
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Coding sequence (CDS) from alignment at tig00000099_pilon:113430..114500+

>Ggra5390.t1 ID=Ggra5390.t1|Name=Ggra5390.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1071bp|location=Sequence derived from alignment at tig00000099_pilon:113430..114500+ (Gracilaria gracilis GNS1m male)
ATGGTTTGGTGTACGGAGAACTGGACGAGCGCTGCAAGTCAAAATGAGAC
CGAAGTGGGCAAGAAGAACGGCAAGGATAGTGCAATGTTAGCGGGAGTTT
TGAGGGATGAAGACAAGCACGAGGACGTACGGCGTGCAAGTATCGAAACT
GAGGCTAACGGGCGCAGCAATGAAGAAGAAAACGTGAGGGCGATACAAGA
CAGCTGCGGGCGTCGAAAGTATAGACAAGAACTGGTTGAGCTGGTTGTAC
AAATCGTGGGACGGGAACACAGTTATAGACAAGACAGCGAGAAAAGTCGG
GAGCTGTTGGATAAGTTTTGCTGGAGTGATGTTGCTCTGGCAAGGGACAG
ACTTTTTCTTCGTGGGGTGCTTATTTACAGGGATGAGAGAGATAATGGTA
GTGGGAGCTTCGTGGCTACGAAGAAAGGAGGCGGCAATGGGTACTTGAGC
ATGCTAAGAGACGAGGATGAAGTGAGCACGAGATGGATGGCGGAAATTTA
CAAGGCGGAGAACGAAGTGTGCTGGGAGAAAAGCAAGCTGAGAGAGGCGG
TTTGTGACAGAGCAGAGGCGTCTGTTTCCAATGTGGCCACTAACTTACTG
ACGAAGAAGATGTTCTTTATGAACGACGGGGTGTGCATGATGGCAAGAAT
GTCGAAGAGCAGCGCGAGCAAGGAGGCGATACGATTAGCTGTGAAGCGCG
TAGAAAACGACTGGACTTGGGATGTGAAACGCAAGCGGCGTAATGGAGTA
CGAAGCGAACTGAAGAGCGAAGCACGACGACGACTGCTGTGCGCAATCGG
GGAGAGCGGAAGCAGGGGGAAACTATTGAGCGAGCTGCTGGAGCTGATAA
AGGCGCGAAACGACGAGGAAAGGGCGGCAGCGGTGTGGGGTCTACAAGCG
CTGCTTCGCGACGGATGCATACATCGGTTCGTGGTGGAGCAAGGCGACGT
GAGCGACGAGCAGTTTGGTGCGTGGCACGGGGTGGGTGCTGTCGTGAGCC
GCAGCCATTGCGAGGCGCTGGTGGTACAACAAGACGTGTGGCCGAAGAGC
AACAAGGCGGTGGCGTGGTAG
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