Ggra5331.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5331.t1
Unique NameGgra5331.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length132
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:118733..119128 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5331Ggra5331Gracilaria gracilis GNS1m malegenetig00000172_pilon 118733..119128 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5331.t1.start1Ggra5331.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000172_pilon 118733..118735 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5331.t1.CDS1Ggra5331.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000172_pilon 118733..119128 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5331.t1.exon1Ggra5331.t1.exon1Gracilaria gracilis GNS1m maleexontig00000172_pilon 118733..119128 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5331.t1.stop1Ggra5331.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000172_pilon 119126..119128 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5331.t1Ggra5331.t1Gracilaria gracilis GNS1m malepolypeptidetig00000172_pilon 118733..119128 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5331.t1 ID=Ggra5331.t1|Name=Ggra5331.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=132bp
MYGTRGKAASSLQASEYAPPTLPQVKTTACGSSRPGRGDYLYCSAEILAL
KVTPNHEQPIGDIAGIRSFWGWERSDTNGMVLMSYLRSTILSSVRQAFYE
TATVHAVLQLAVNKKNGIRSVADLIRQKVEK*
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spliced messenger RNA

>Ggra5331.t1 ID=Ggra5331.t1|Name=Ggra5331.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=396bp|location=Sequence derived from alignment at tig00000172_pilon:118733..119128+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACGGTACTAGGGGTAAGGCGGCTTCGAGCCTTCAAGCAAGCGAATA
TGCTCCTCCGACATTGCCGCAAGTGAAGACTACAGCATGTGGCTCATCGA
GGCCTGGTCGAGGCGATTATCTGTATTGTTCTGCAGAAATATTGGCGCTG
AAAGTGACGCCCAATCATGAGCAGCCCATCGGCGACATCGCTGGTATCCG
CTCATTCTGGGGATGGGAGCGCTCCGACACCAACGGCATGGTGTTAATGT
CGTACTTGAGGTCGACAATCTTGTCAAGCGTTCGTCAAGCATTCTACGAA
ACAGCAACTGTGCATGCTGTGCTTCAACTGGCCGTAAACAAGAAAAATGG
AATCCGCAGCGTTGCGGATCTGATCCGTCAAAAGGTCGAGAAATAA
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protein sequence of Ggra5331.t1

>Ggra5331.t1 ID=Ggra5331.t1|Name=Ggra5331.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=132bp
MYGTRGKAASSLQASEYAPPTLPQVKTTACGSSRPGRGDYLYCSAEILAL
KVTPNHEQPIGDIAGIRSFWGWERSDTNGMVLMSYLRSTILSSVRQAFYE
TATVHAVLQLAVNKKNGIRSVADLIRQKVEK*
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mRNA from alignment at tig00000172_pilon:118733..119128+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5331.t1 ID=Ggra5331.t1|Name=Ggra5331.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=396bp|location=Sequence derived from alignment at tig00000172_pilon:118733..119128+ (Gracilaria gracilis GNS1m male)
ATGTACGGTACTAGGGGTAAGGCGGCTTCGAGCCTTCAAGCAAGCGAATA
TGCTCCTCCGACATTGCCGCAAGTGAAGACTACAGCATGTGGCTCATCGA
GGCCTGGTCGAGGCGATTATCTGTATTGTTCTGCAGAAATATTGGCGCTG
AAAGTGACGCCCAATCATGAGCAGCCCATCGGCGACATCGCTGGTATCCG
CTCATTCTGGGGATGGGAGCGCTCCGACACCAACGGCATGGTGTTAATGT
CGTACTTGAGGTCGACAATCTTGTCAAGCGTTCGTCAAGCATTCTACGAA
ACAGCAACTGTGCATGCTGTGCTTCAACTGGCCGTAAACAAGAAAAATGG
AATCCGCAGCGTTGCGGATCTGATCCGTCAAAAGGTCGAGAAATAA
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Coding sequence (CDS) from alignment at tig00000172_pilon:118733..119128+

>Ggra5331.t1 ID=Ggra5331.t1|Name=Ggra5331.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=396bp|location=Sequence derived from alignment at tig00000172_pilon:118733..119128+ (Gracilaria gracilis GNS1m male)
ATGTACGGTACTAGGGGTAAGGCGGCTTCGAGCCTTCAAGCAAGCGAATA
TGCTCCTCCGACATTGCCGCAAGTGAAGACTACAGCATGTGGCTCATCGA
GGCCTGGTCGAGGCGATTATCTGTATTGTTCTGCAGAAATATTGGCGCTG
AAAGTGACGCCCAATCATGAGCAGCCCATCGGCGACATCGCTGGTATCCG
CTCATTCTGGGGATGGGAGCGCTCCGACACCAACGGCATGGTGTTAATGT
CGTACTTGAGGTCGACAATCTTGTCAAGCGTTCGTCAAGCATTCTACGAA
ACAGCAACTGTGCATGCTGTGCTTCAACTGGCCGTAAACAAGAAAAATGG
AATCCGCAGCGTTGCGGATCTGATCCGTCAAAAGGTCGAGAAATAA
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