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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 109760.SPPG_07484T0 |
| PFAMs | Arm |
| Max annot lvl | 4751|Fungi |
| GOs | GO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006109,GO:0006111,GO:0006355,GO:0006357,GO:0006508,GO:0006511,GO:0006807,GO:0007039,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009653,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010675,GO:0010677,GO:0010906,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0030154,GO:0030163,GO:0030435,GO:0030437,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032502,GO:0032505,GO:0032991,GO:0034293,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0043632,GO:0043934,GO:0043935,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0044703,GO:0045721,GO:0045893,GO:0045912,GO:0045935,GO:0045944,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051321,GO:0051603,GO:0051704,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901565,GO:1901575,GO:1902680,GO:1903046,GO:1903506,GO:1903508,GO:2000112,GO:2001141 |
| Evalue | 2.14e-81 |
| EggNOG OGs | COG5369@1|root,KOG1293@2759|Eukaryota,39RB3@33154|Opisthokonta,3NVYZ@4751|Fungi |
| Description | armadillo repeat protein |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5225.t1.stop1 | Ggra5225.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000069_pilon 809265..809267 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5225.t1.start1 | Ggra5225.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000069_pilon 811716..811718 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5225.t1 ID=Ggra5225.t1|Name=Ggra5225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=818bp MESFAVDAIVALQHPDVRSRISAARSIKNAIVGNPTNKRLFLSKGVLQPL INAANHQDPQLAEQAIASIGSLACYLPPIPVESIATPLLHCLFSNDVRPV SAATRALKLVVCSDAVDVKQLVPVFTTQDVAERLVQLLMSEDDGLAEVCA VILSRITLSTTEATVFERANAVSALVHILCRTNHERCTEACLCALTSLSQ SHSSISRQLTNDHGLVTIVIPLTNSPTPSLRLAACRILTIFKSHGLLTQG LDSNVVTSLVYLLGDPTHRIQITSALTLSELVENSPELQSVATEHDAVPK LVRMFCDSMSDKNEEEKDDEMTDSNPTPTRKNEHRIELCASALTAIASTT RNIDASRVAVVEEEALPRIVTALEEKNEDVVLAAVQCVRSLSRSVKIVRR DIADERIGTTLLRLLSFSNAAIQRCASAALCNLVLEFSPLRTSILDNGGI AVLIGLLSSVDDELRENALWAVKNLLFKADAETKTAVMNQLGYKNLQALC TDKRHRIRELAMSIVRNLACSGSADSQREQLDALFAATGNKLISILSDAL KNDSESSELAVQALYVVCNIASGTEEHKASLIDSEIPRLILQWTSHKDER ARIAAVWCAINLSWNDRPSQPRTPSRQRRTHRPRMLMPRFEMLQRQHLPA PSSPFSRSVLERSDRHYESVALTDRQSNTSDAEMNVETREDSMDLSSGRE SDQLPVRSQGTSSSRQRRQAPKTSGYQWRIERLRELGFEGRLRSLTNDPH IEVQGRARAALEFFDCGDVNPLDYSPSALLEYEPSSSSITPRQSSRTNPH SISNRVLASDSSDAGST* back to topspliced messenger RNA >Ggra5225.t1 ID=Ggra5225.t1|Name=Ggra5225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2454bp|location=Sequence derived from alignment at tig00000069_pilon:809265..811718- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGTCTTTCGCCGTCGACGCGATTGTGGCTCTACAACATCCCGACGT CCGTTCTCGAATATCTGCTGCACGCAGTATTAAGAATGCTATCGTGGGAA ATCCGACTAACAAACGACTCTTCCTTTCAAAAGGCGTACTGCAACCACTT ATCAACGCTGCTAACCACCAAGATCCACAACTAGCCGAACAAGCCATAGC TTCGATCGGCTCCCTAGCCTGTTACCTACCCCCTATACCCGTCGAAAGCA TTGCAACCCCTCTTTTACACTGTCTCTTTTCGAATGACGTTCGCCCCGTA AGCGCCGCCACCCGCGCTCTAAAGCTTGTAGTTTGCTCCGATGCCGTAGA TGTCAAACAACTAGTCCCAGTCTTTACCACCCAAGATGTTGCCGAACGAC TGGTTCAGCTGTTGATGTCTGAAGATGATGGTCTGGCAGAAGTCTGTGCT GTCATTCTGTCTCGCATAACCCTGTCCACAACGGAAGCTACTGTATTTGA GCGTGCTAATGCCGTTTCTGCTCTTGTCCACATTCTGTGCCGCACCAACC ATGAGAGATGTACTGAAGCATGTCTTTGTGCTCTCACTTCACTCTCTCAA AGCCACTCTTCCATTTCAAGACAACTCACAAACGACCATGGACTCGTTAC AATAGTGATACCGCTTACAAATTCACCTACACCCTCATTGAGGCTGGCTG CCTGTCGCATCCTCACCATATTCAAGTCCCACGGACTTTTAACCCAGGGG CTGGATAGTAATGTCGTCACATCTCTCGTCTACCTTCTGGGCGATCCTAC GCATCGCATTCAAATAACTTCTGCACTTACTCTCTCCGAACTCGTCGAAA ACTCACCCGAATTGCAAAGTGTCGCAACTGAGCACGACGCCGTGCCCAAG TTGGTTCGCATGTTTTGCGACAGCATGTCCGACAAAAACGAAGAGGAGAA AGACGACGAAATGACAGATTCCAATCCAACACCCACCCGAAAGAACGAGC ATCGGATAGAATTGTGCGCGAGTGCTTTGACAGCCATAGCGTCCACGACA CGCAACATAGATGCATCGCGCGTCGCCGTCGTCGAAGAAGAAGCTCTGCC AAGGATTGTGACAGCTCTGGAAGAAAAAAACGAAGACGTCGTCCTGGCTG CGGTGCAATGTGTGCGCTCGCTGAGTCGGAGTGTGAAGATTGTGCGTCGC GATATCGCAGACGAAAGAATCGGCACAACGCTTCTCCGTCTACTATCTTT TTCGAACGCTGCCATTCAAAGATGTGCGAGTGCAGCCTTATGCAACCTGG TTTTGGAATTCTCTCCATTACGAACTTCAATCCTTGATAATGGGGGCATT GCGGTGCTTATCGGGTTGCTGAGCTCAGTGGATGATGAGCTGCGGGAAAA TGCGTTGTGGGCCGTCAAGAATTTGCTCTTTAAAGCTGATGCAGAAACTA AGACCGCAGTAATGAATCAGCTCGGGTACAAGAATTTGCAAGCGTTATGC ACCGACAAACGCCACCGAATCCGTGAGCTGGCAATGAGTATCGTCCGAAA CCTAGCGTGCTCTGGCTCTGCAGATTCTCAAAGAGAACAACTTGATGCTC TGTTCGCAGCTACGGGTAACAAGTTGATATCCATTCTTTCAGATGCGCTC AAAAACGATTCTGAGAGCTCTGAGCTTGCGGTGCAGGCGTTGTATGTAGT ATGTAATATTGCCTCGGGTACAGAAGAGCACAAGGCGTCGTTGATCGACT CTGAAATTCCACGGCTCATACTCCAATGGACATCCCACAAGGATGAGAGA GCCAGGATTGCTGCGGTATGGTGCGCCATCAATTTGTCATGGAACGATAG ACCTTCGCAACCTCGAACCCCTTCACGGCAGAGAAGAACGCATCGTCCAA GGATGTTAATGCCAAGGTTTGAGATGTTGCAACGACAACATTTACCTGCT CCATCCTCGCCATTTTCGCGAAGTGTTTTAGAACGATCAGACAGGCACTA TGAAAGCGTTGCTCTGACAGACCGGCAATCAAACACTTCAGATGCTGAAA TGAATGTGGAGACGCGTGAAGATTCGATGGATTTATCCTCCGGTAGGGAA TCCGATCAACTACCAGTCCGTTCACAAGGAACCTCATCTTCCCGTCAGCG AAGACAAGCCCCCAAGACCAGTGGGTATCAATGGAGGATTGAACGCTTGC GTGAACTAGGTTTCGAAGGACGGTTACGTTCCCTTACAAACGATCCCCAC ATAGAAGTTCAAGGGAGAGCAAGGGCTGCTCTAGAATTCTTTGATTGTGG AGACGTTAACCCACTGGATTACAGTCCTTCCGCTTTGCTCGAATATGAGC CATCTTCATCTTCCATAACACCACGTCAGTCTTCCCGCACAAATCCTCAT TCCATTTCTAATAGAGTTCTTGCCAGTGATAGTTCCGATGCAGGTTCCAC TTAA back to topprotein sequence of Ggra5225.t1 >Ggra5225.t1 ID=Ggra5225.t1|Name=Ggra5225.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=818bp
MESFAVDAIVALQHPDVRSRISAARSIKNAIVGNPTNKRLFLSKGVLQPL INAANHQDPQLAEQAIASIGSLACYLPPIPVESIATPLLHCLFSNDVRPV SAATRALKLVVCSDAVDVKQLVPVFTTQDVAERLVQLLMSEDDGLAEVCA VILSRITLSTTEATVFERANAVSALVHILCRTNHERCTEACLCALTSLSQ SHSSISRQLTNDHGLVTIVIPLTNSPTPSLRLAACRILTIFKSHGLLTQG LDSNVVTSLVYLLGDPTHRIQITSALTLSELVENSPELQSVATEHDAVPK LVRMFCDSMSDKNEEEKDDEMTDSNPTPTRKNEHRIELCASALTAIASTT RNIDASRVAVVEEEALPRIVTALEEKNEDVVLAAVQCVRSLSRSVKIVRR DIADERIGTTLLRLLSFSNAAIQRCASAALCNLVLEFSPLRTSILDNGGI AVLIGLLSSVDDELRENALWAVKNLLFKADAETKTAVMNQLGYKNLQALC TDKRHRIRELAMSIVRNLACSGSADSQREQLDALFAATGNKLISILSDAL KNDSESSELAVQALYVVCNIASGTEEHKASLIDSEIPRLILQWTSHKDER ARIAAVWCAINLSWNDRPSQPRTPSRQRRTHRPRMLMPRFEMLQRQHLPA PSSPFSRSVLERSDRHYESVALTDRQSNTSDAEMNVETREDSMDLSSGRE SDQLPVRSQGTSSSRQRRQAPKTSGYQWRIERLRELGFEGRLRSLTNDPH IEVQGRARAALEFFDCGDVNPLDYSPSALLEYEPSSSSITPRQSSRTNPH SISNRVLASDSSDAGST* back to topmRNA from alignment at tig00000069_pilon:809265..811718- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5225.t1 ID=Ggra5225.t1|Name=Ggra5225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2454bp|location=Sequence derived from alignment at tig00000069_pilon:809265..811718- (Gracilaria gracilis GNS1m male) ATGGAGTCTTTCGCCGTCGACGCGATTGTGGCTCTACAACATCCCGACGT
CCGTTCTCGAATATCTGCTGCACGCAGTATTAAGAATGCTATCGTGGGAA
ATCCGACTAACAAACGACTCTTCCTTTCAAAAGGCGTACTGCAACCACTT
ATCAACGCTGCTAACCACCAAGATCCACAACTAGCCGAACAAGCCATAGC
TTCGATCGGCTCCCTAGCCTGTTACCTACCCCCTATACCCGTCGAAAGCA
TTGCAACCCCTCTTTTACACTGTCTCTTTTCGAATGACGTTCGCCCCGTA
AGCGCCGCCACCCGCGCTCTAAAGCTTGTAGTTTGCTCCGATGCCGTAGA
TGTCAAACAACTAGTCCCAGTCTTTACCACCCAAGATGTTGCCGAACGAC
TGGTTCAGCTGTTGATGTCTGAAGATGATGGTCTGGCAGAAGTCTGTGCT
GTCATTCTGTCTCGCATAACCCTGTCCACAACGGAAGCTACTGTATTTGA
GCGTGCTAATGCCGTTTCTGCTCTTGTCCACATTCTGTGCCGCACCAACC
ATGAGAGATGTACTGAAGCATGTCTTTGTGCTCTCACTTCACTCTCTCAA
AGCCACTCTTCCATTTCAAGACAACTCACAAACGACCATGGACTCGTTAC
AATAGTGATACCGCTTACAAATTCACCTACACCCTCATTGAGGCTGGCTG
CCTGTCGCATCCTCACCATATTCAAGTCCCACGGACTTTTAACCCAGGGG
CTGGATAGTAATGTCGTCACATCTCTCGTCTACCTTCTGGGCGATCCTAC
GCATCGCATTCAAATAACTTCTGCACTTACTCTCTCCGAACTCGTCGAAA
ACTCACCCGAATTGCAAAGTGTCGCAACTGAGCACGACGCCGTGCCCAAG
TTGGTTCGCATGTTTTGCGACAGCATGTCCGACAAAAACGAAGAGGAGAA
AGACGACGAAATGACAGATTCCAATCCAACACCCACCCGAAAGAACGAGC
ATCGGATAGAATTGTGCGCGAGTGCTTTGACAGCCATAGCGTCCACGACA
CGCAACATAGATGCATCGCGCGTCGCCGTCGTCGAAGAAGAAGCTCTGCC
AAGGATTGTGACAGCTCTGGAAGAAAAAAACGAAGACGTCGTCCTGGCTG
CGGTGCAATGTGTGCGCTCGCTGAGTCGGAGTGTGAAGATTGTGCGTCGC
GATATCGCAGACGAAAGAATCGGCACAACGCTTCTCCGTCTACTATCTTT
TTCGAACGCTGCCATTCAAAGATGTGCGAGTGCAGCCTTATGCAACCTGG
TTTTGGAATTCTCTCCATTACGAACTTCAATCCTTGATAATGGGGGCATT
GCGGTGCTTATCGGGTTGCTGAGCTCAGTGGATGATGAGCTGCGGGAAAA
TGCGTTGTGGGCCGTCAAGAATTTGCTCTTTAAAGCTGATGCAGAAACTA
AGACCGCAGTAATGAATCAGCTCGGGTACAAGAATTTGCAAGCGTTATGC
ACCGACAAACGCCACCGAATCCGTGAGCTGGCAATGAGTATCGTCCGAAA
CCTAGCGTGCTCTGGCTCTGCAGATTCTCAAAGAGAACAACTTGATGCTC
TGTTCGCAGCTACGGGTAACAAGTTGATATCCATTCTTTCAGATGCGCTC
AAAAACGATTCTGAGAGCTCTGAGCTTGCGGTGCAGGCGTTGTATGTAGT
ATGTAATATTGCCTCGGGTACAGAAGAGCACAAGGCGTCGTTGATCGACT
CTGAAATTCCACGGCTCATACTCCAATGGACATCCCACAAGGATGAGAGA
GCCAGGATTGCTGCGGTATGGTGCGCCATCAATTTGTCATGGAACGATAG
ACCTTCGCAACCTCGAACCCCTTCACGGCAGAGAAGAACGCATCGTCCAA
GGATGTTAATGCCAAGGTTTGAGATGTTGCAACGACAACATTTACCTGCT
CCATCCTCGCCATTTTCGCGAAGTGTTTTAGAACGATCAGACAGGCACTA
TGAAAGCGTTGCTCTGACAGACCGGCAATCAAACACTTCAGATGCTGAAA
TGAATGTGGAGACGCGTGAAGATTCGATGGATTTATCCTCCGGTAGGGAA
TCCGATCAACTACCAGTCCGTTCACAAGGAACCTCATCTTCCCGTCAGCG
AAGACAAGCCCCCAAGACCAGTGGGTATCAATGGAGGATTGAACGCTTGC
GTGAACTAGGTTTCGAAGGACGGTTACGTTCCCTTACAAACGATCCCCAC
ATAGAAGTTCAAGGGAGAGCAAGGGCTGCTCTAGAATTCTTTGATTGTGG
AGACGTTAACCCACTGGATTACAGTCCTTCCGCTTTGCTCGAATATGAGC
CATCTTCATCTTCCATAACACCACGTCAGTCTTCCCGCACAAATCCTCAT
TCCATTTCTAATAGAGTTCTTGCCAGTGATAGTTCCGATGCAGGTTCCAC
TTAA back to topCoding sequence (CDS) from alignment at tig00000069_pilon:809265..811718- >Ggra5225.t1 ID=Ggra5225.t1|Name=Ggra5225.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2454bp|location=Sequence derived from alignment at tig00000069_pilon:809265..811718- (Gracilaria gracilis GNS1m male) ATGGAGTCTTTCGCCGTCGACGCGATTGTGGCTCTACAACATCCCGACGT CCGTTCTCGAATATCTGCTGCACGCAGTATTAAGAATGCTATCGTGGGAA ATCCGACTAACAAACGACTCTTCCTTTCAAAAGGCGTACTGCAACCACTT ATCAACGCTGCTAACCACCAAGATCCACAACTAGCCGAACAAGCCATAGC TTCGATCGGCTCCCTAGCCTGTTACCTACCCCCTATACCCGTCGAAAGCA TTGCAACCCCTCTTTTACACTGTCTCTTTTCGAATGACGTTCGCCCCGTA AGCGCCGCCACCCGCGCTCTAAAGCTTGTAGTTTGCTCCGATGCCGTAGA TGTCAAACAACTAGTCCCAGTCTTTACCACCCAAGATGTTGCCGAACGAC TGGTTCAGCTGTTGATGTCTGAAGATGATGGTCTGGCAGAAGTCTGTGCT GTCATTCTGTCTCGCATAACCCTGTCCACAACGGAAGCTACTGTATTTGA GCGTGCTAATGCCGTTTCTGCTCTTGTCCACATTCTGTGCCGCACCAACC ATGAGAGATGTACTGAAGCATGTCTTTGTGCTCTCACTTCACTCTCTCAA AGCCACTCTTCCATTTCAAGACAACTCACAAACGACCATGGACTCGTTAC AATAGTGATACCGCTTACAAATTCACCTACACCCTCATTGAGGCTGGCTG CCTGTCGCATCCTCACCATATTCAAGTCCCACGGACTTTTAACCCAGGGG CTGGATAGTAATGTCGTCACATCTCTCGTCTACCTTCTGGGCGATCCTAC GCATCGCATTCAAATAACTTCTGCACTTACTCTCTCCGAACTCGTCGAAA ACTCACCCGAATTGCAAAGTGTCGCAACTGAGCACGACGCCGTGCCCAAG TTGGTTCGCATGTTTTGCGACAGCATGTCCGACAAAAACGAAGAGGAGAA AGACGACGAAATGACAGATTCCAATCCAACACCCACCCGAAAGAACGAGC ATCGGATAGAATTGTGCGCGAGTGCTTTGACAGCCATAGCGTCCACGACA CGCAACATAGATGCATCGCGCGTCGCCGTCGTCGAAGAAGAAGCTCTGCC AAGGATTGTGACAGCTCTGGAAGAAAAAAACGAAGACGTCGTCCTGGCTG CGGTGCAATGTGTGCGCTCGCTGAGTCGGAGTGTGAAGATTGTGCGTCGC GATATCGCAGACGAAAGAATCGGCACAACGCTTCTCCGTCTACTATCTTT TTCGAACGCTGCCATTCAAAGATGTGCGAGTGCAGCCTTATGCAACCTGG TTTTGGAATTCTCTCCATTACGAACTTCAATCCTTGATAATGGGGGCATT GCGGTGCTTATCGGGTTGCTGAGCTCAGTGGATGATGAGCTGCGGGAAAA TGCGTTGTGGGCCGTCAAGAATTTGCTCTTTAAAGCTGATGCAGAAACTA AGACCGCAGTAATGAATCAGCTCGGGTACAAGAATTTGCAAGCGTTATGC ACCGACAAACGCCACCGAATCCGTGAGCTGGCAATGAGTATCGTCCGAAA CCTAGCGTGCTCTGGCTCTGCAGATTCTCAAAGAGAACAACTTGATGCTC TGTTCGCAGCTACGGGTAACAAGTTGATATCCATTCTTTCAGATGCGCTC AAAAACGATTCTGAGAGCTCTGAGCTTGCGGTGCAGGCGTTGTATGTAGT ATGTAATATTGCCTCGGGTACAGAAGAGCACAAGGCGTCGTTGATCGACT CTGAAATTCCACGGCTCATACTCCAATGGACATCCCACAAGGATGAGAGA GCCAGGATTGCTGCGGTATGGTGCGCCATCAATTTGTCATGGAACGATAG ACCTTCGCAACCTCGAACCCCTTCACGGCAGAGAAGAACGCATCGTCCAA GGATGTTAATGCCAAGGTTTGAGATGTTGCAACGACAACATTTACCTGCT CCATCCTCGCCATTTTCGCGAAGTGTTTTAGAACGATCAGACAGGCACTA TGAAAGCGTTGCTCTGACAGACCGGCAATCAAACACTTCAGATGCTGAAA TGAATGTGGAGACGCGTGAAGATTCGATGGATTTATCCTCCGGTAGGGAA TCCGATCAACTACCAGTCCGTTCACAAGGAACCTCATCTTCCCGTCAGCG AAGACAAGCCCCCAAGACCAGTGGGTATCAATGGAGGATTGAACGCTTGC GTGAACTAGGTTTCGAAGGACGGTTACGTTCCCTTACAAACGATCCCCAC ATAGAAGTTCAAGGGAGAGCAAGGGCTGCTCTAGAATTCTTTGATTGTGG AGACGTTAACCCACTGGATTACAGTCCTTCCGCTTTGCTCGAATATGAGC CATCTTCATCTTCCATAACACCACGTCAGTCTTCCCGCACAAATCCTCAT TCCATTTCTAATAGAGTTCTTGCCAGTGATAGTTCCGATGCAGGTTCCAC TTAA back to top
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