Ggra5168.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5168.t1
Unique NameGgra5168.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length378
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:658597..659730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5168Ggra5168Gracilaria gracilis GNS1m malegenetig00000069_pilon 658597..659730 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5168.t1.stop1Ggra5168.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000069_pilon 658597..658599 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5168.t1.CDS1Ggra5168.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000069_pilon 658597..659730 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5168.t1.exon1Ggra5168.t1.exon1Gracilaria gracilis GNS1m maleexontig00000069_pilon 658597..659730 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5168.t1.start1Ggra5168.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000069_pilon 659728..659730 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5168.t1Ggra5168.t1Gracilaria gracilis GNS1m malepolypeptidetig00000069_pilon 658597..659730 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5168.t1 ID=Ggra5168.t1|Name=Ggra5168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=378bp
MIARPDSEGPPDLDDFFNPAVRNVGKQGPPIKLATGRSSLKDGDSYEATK
TAVESALANIQDPHLVHVTFGPLLDPVLVKNALAELLKGKQIIARSVDKK
GASDIVEVLFLQGGGPSFIKMAISTEDVITDIDSALRNAAASAARKAVQE
LDDPQLCTFLVFAHTPGSPDAARKGIDEALPGAIAYGGPAVGPDGNWKLF
AQDEVANDPADKQTVLCAAVAGSLSFLLSSVVKNWAQPVFTEALSYLSPN
YIGDAKVDLLTAIRYNDWEKFLSCLEQSGVSIDVKWSDKQNQTPLLAACA
RARTRMIQYLLEKGADVSHRNDGGFTAVMYTRMLSDFDQDIIRQQLDMLR
NAGAEMQLTAHELTQLRRVTRGRIVEQ*
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spliced messenger RNA

>Ggra5168.t1 ID=Ggra5168.t1|Name=Ggra5168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1134bp|location=Sequence derived from alignment at tig00000069_pilon:658597..659730- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATCGCTCGACCTGATTCAGAAGGACCGCCAGACCTAGATGATTTCTT
CAATCCAGCAGTCCGAAATGTAGGTAAGCAAGGGCCCCCGATAAAGCTAG
CAACAGGACGATCTAGTTTGAAGGATGGAGACTCCTATGAAGCTACCAAA
ACAGCCGTGGAATCTGCACTTGCCAATATTCAAGACCCACATCTTGTTCA
CGTCACCTTCGGTCCTCTACTTGATCCCGTGCTCGTAAAGAATGCGCTTG
CAGAACTGCTCAAAGGTAAACAGATAATTGCCCGGTCGGTGGATAAAAAG
GGTGCATCCGATATCGTTGAAGTACTGTTTCTTCAAGGAGGTGGCCCTTC
TTTCATCAAAATGGCAATTTCGACGGAAGATGTTATCACTGACATAGACA
GTGCCTTGCGGAATGCGGCAGCTAGTGCCGCTCGGAAAGCTGTGCAGGAG
CTCGATGACCCGCAACTTTGTACTTTCCTAGTCTTTGCACACACCCCAGG
GTCCCCTGATGCAGCTAGGAAGGGAATTGATGAGGCACTCCCAGGGGCAA
TTGCATATGGAGGACCAGCCGTTGGTCCGGATGGAAATTGGAAGCTCTTC
GCCCAAGATGAAGTTGCAAATGATCCTGCAGACAAACAAACGGTTCTCTG
CGCAGCCGTTGCGGGATCCTTATCCTTCTTGCTCTCCTCCGTTGTGAAAA
ACTGGGCGCAACCTGTTTTTACAGAAGCTCTTTCTTACCTGAGCCCAAAC
TACATAGGAGATGCAAAAGTGGACTTGCTTACTGCTATTCGATACAACGA
CTGGGAGAAGTTTCTATCGTGTCTTGAACAGAGCGGTGTCTCAATAGACG
TGAAATGGTCTGATAAACAAAACCAGACACCCCTGCTGGCTGCTTGCGCT
AGAGCTAGAACAAGAATGATTCAGTACCTTTTGGAAAAGGGAGCAGATGT
ATCGCATAGAAACGATGGCGGCTTCACGGCAGTGATGTATACTAGGATGC
TGTCCGATTTCGATCAAGACATTATACGTCAACAATTAGATATGTTGAGA
AATGCAGGAGCGGAGATGCAGCTTACCGCTCATGAGCTGACACAATTGAG
ACGGGTTACCCGGGGACGCATTGTCGAGCAGTAG
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protein sequence of Ggra5168.t1

>Ggra5168.t1 ID=Ggra5168.t1|Name=Ggra5168.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=378bp
MIARPDSEGPPDLDDFFNPAVRNVGKQGPPIKLATGRSSLKDGDSYEATK
TAVESALANIQDPHLVHVTFGPLLDPVLVKNALAELLKGKQIIARSVDKK
GASDIVEVLFLQGGGPSFIKMAISTEDVITDIDSALRNAAASAARKAVQE
LDDPQLCTFLVFAHTPGSPDAARKGIDEALPGAIAYGGPAVGPDGNWKLF
AQDEVANDPADKQTVLCAAVAGSLSFLLSSVVKNWAQPVFTEALSYLSPN
YIGDAKVDLLTAIRYNDWEKFLSCLEQSGVSIDVKWSDKQNQTPLLAACA
RARTRMIQYLLEKGADVSHRNDGGFTAVMYTRMLSDFDQDIIRQQLDMLR
NAGAEMQLTAHELTQLRRVTRGRIVEQ*
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mRNA from alignment at tig00000069_pilon:658597..659730-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5168.t1 ID=Ggra5168.t1|Name=Ggra5168.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1134bp|location=Sequence derived from alignment at tig00000069_pilon:658597..659730- (Gracilaria gracilis GNS1m male)
ATGATCGCTCGACCTGATTCAGAAGGACCGCCAGACCTAGATGATTTCTT
CAATCCAGCAGTCCGAAATGTAGGTAAGCAAGGGCCCCCGATAAAGCTAG
CAACAGGACGATCTAGTTTGAAGGATGGAGACTCCTATGAAGCTACCAAA
ACAGCCGTGGAATCTGCACTTGCCAATATTCAAGACCCACATCTTGTTCA
CGTCACCTTCGGTCCTCTACTTGATCCCGTGCTCGTAAAGAATGCGCTTG
CAGAACTGCTCAAAGGTAAACAGATAATTGCCCGGTCGGTGGATAAAAAG
GGTGCATCCGATATCGTTGAAGTACTGTTTCTTCAAGGAGGTGGCCCTTC
TTTCATCAAAATGGCAATTTCGACGGAAGATGTTATCACTGACATAGACA
GTGCCTTGCGGAATGCGGCAGCTAGTGCCGCTCGGAAAGCTGTGCAGGAG
CTCGATGACCCGCAACTTTGTACTTTCCTAGTCTTTGCACACACCCCAGG
GTCCCCTGATGCAGCTAGGAAGGGAATTGATGAGGCACTCCCAGGGGCAA
TTGCATATGGAGGACCAGCCGTTGGTCCGGATGGAAATTGGAAGCTCTTC
GCCCAAGATGAAGTTGCAAATGATCCTGCAGACAAACAAACGGTTCTCTG
CGCAGCCGTTGCGGGATCCTTATCCTTCTTGCTCTCCTCCGTTGTGAAAA
ACTGGGCGCAACCTGTTTTTACAGAAGCTCTTTCTTACCTGAGCCCAAAC
TACATAGGAGATGCAAAAGTGGACTTGCTTACTGCTATTCGATACAACGA
CTGGGAGAAGTTTCTATCGTGTCTTGAACAGAGCGGTGTCTCAATAGACG
TGAAATGGTCTGATAAACAAAACCAGACACCCCTGCTGGCTGCTTGCGCT
AGAGCTAGAACAAGAATGATTCAGTACCTTTTGGAAAAGGGAGCAGATGT
ATCGCATAGAAACGATGGCGGCTTCACGGCAGTGATGTATACTAGGATGC
TGTCCGATTTCGATCAAGACATTATACGTCAACAATTAGATATGTTGAGA
AATGCAGGAGCGGAGATGCAGCTTACCGCTCATGAGCTGACACAATTGAG
ACGGGTTACCCGGGGACGCATTGTCGAGCAGTAG
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Coding sequence (CDS) from alignment at tig00000069_pilon:658597..659730-

>Ggra5168.t1 ID=Ggra5168.t1|Name=Ggra5168.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1134bp|location=Sequence derived from alignment at tig00000069_pilon:658597..659730- (Gracilaria gracilis GNS1m male)
ATGATCGCTCGACCTGATTCAGAAGGACCGCCAGACCTAGATGATTTCTT
CAATCCAGCAGTCCGAAATGTAGGTAAGCAAGGGCCCCCGATAAAGCTAG
CAACAGGACGATCTAGTTTGAAGGATGGAGACTCCTATGAAGCTACCAAA
ACAGCCGTGGAATCTGCACTTGCCAATATTCAAGACCCACATCTTGTTCA
CGTCACCTTCGGTCCTCTACTTGATCCCGTGCTCGTAAAGAATGCGCTTG
CAGAACTGCTCAAAGGTAAACAGATAATTGCCCGGTCGGTGGATAAAAAG
GGTGCATCCGATATCGTTGAAGTACTGTTTCTTCAAGGAGGTGGCCCTTC
TTTCATCAAAATGGCAATTTCGACGGAAGATGTTATCACTGACATAGACA
GTGCCTTGCGGAATGCGGCAGCTAGTGCCGCTCGGAAAGCTGTGCAGGAG
CTCGATGACCCGCAACTTTGTACTTTCCTAGTCTTTGCACACACCCCAGG
GTCCCCTGATGCAGCTAGGAAGGGAATTGATGAGGCACTCCCAGGGGCAA
TTGCATATGGAGGACCAGCCGTTGGTCCGGATGGAAATTGGAAGCTCTTC
GCCCAAGATGAAGTTGCAAATGATCCTGCAGACAAACAAACGGTTCTCTG
CGCAGCCGTTGCGGGATCCTTATCCTTCTTGCTCTCCTCCGTTGTGAAAA
ACTGGGCGCAACCTGTTTTTACAGAAGCTCTTTCTTACCTGAGCCCAAAC
TACATAGGAGATGCAAAAGTGGACTTGCTTACTGCTATTCGATACAACGA
CTGGGAGAAGTTTCTATCGTGTCTTGAACAGAGCGGTGTCTCAATAGACG
TGAAATGGTCTGATAAACAAAACCAGACACCCCTGCTGGCTGCTTGCGCT
AGAGCTAGAACAAGAATGATTCAGTACCTTTTGGAAAAGGGAGCAGATGT
ATCGCATAGAAACGATGGCGGCTTCACGGCAGTGATGTATACTAGGATGC
TGTCCGATTTCGATCAAGACATTATACGTCAACAATTAGATATGTTGAGA
AATGCAGGAGCGGAGATGCAGCTTACCGCTCATGAGCTGACACAATTGAG
ACGGGTTACCCGGGGACGCATTGTCGAGCAGTAG
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