Ggra5147.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5147.t1
Unique NameGgra5147.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length148
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:598362..598805 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5147Ggra5147Gracilaria gracilis GNS1m malegenetig00000069_pilon 598362..598805 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5147.t1.stop1Ggra5147.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000069_pilon 598362..598364 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5147.t1.CDS1Ggra5147.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000069_pilon 598362..598805 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5147.t1.exon1Ggra5147.t1.exon1Gracilaria gracilis GNS1m maleexontig00000069_pilon 598362..598805 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5147.t1.start1Ggra5147.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000069_pilon 598803..598805 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5147.t1Ggra5147.t1Gracilaria gracilis GNS1m malepolypeptidetig00000069_pilon 598362..598805 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5147.t1 ID=Ggra5147.t1|Name=Ggra5147.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=148bp
MGAATPARQQIVWRGQMRFIAPTSHYGARALALSARAMEAGSLPRTLDLH
GSRTLPRADVAPLIRAAPVQLRLLCVDRHDVRTADVRVLRLTRLLSCAAR
VFCVALQRGCLYVFAERDERRRLCLRAAFVERACNNSPKCCIRPRLS*
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spliced messenger RNA

>Ggra5147.t1 ID=Ggra5147.t1|Name=Ggra5147.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=444bp|location=Sequence derived from alignment at tig00000069_pilon:598362..598805- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGCCGCAACACCCGCGCGCCAACAAATCGTGTGGCGCGGGCAGAT
GCGCTTCATCGCGCCCACGTCGCACTACGGCGCGCGCGCGCTGGCGCTCA
GCGCGCGCGCCATGGAGGCGGGCAGTCTGCCGCGCACGCTGGATCTGCAC
GGCAGTCGCACGCTGCCGCGCGCCGACGTGGCGCCGCTCATCCGCGCCGC
GCCCGTGCAGCTGCGGCTGCTGTGCGTGGACCGCCACGACGTGCGCACGG
CCGATGTGCGCGTGCTGCGCCTCACGCGCCTGCTCAGTTGCGCTGCGCGC
GTGTTCTGCGTCGCGCTGCAGCGCGGCTGCCTGTACGTGTTCGCCGAGCG
CGATGAGCGTCGCCGCCTTTGTCTGCGCGCCGCCTTTGTTGAGCGCGCTT
GCAACAACTCTCCCAAGTGTTGCATACGTCCGCGTCTGTCCTAA
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protein sequence of Ggra5147.t1

>Ggra5147.t1 ID=Ggra5147.t1|Name=Ggra5147.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=148bp
MGAATPARQQIVWRGQMRFIAPTSHYGARALALSARAMEAGSLPRTLDLH
GSRTLPRADVAPLIRAAPVQLRLLCVDRHDVRTADVRVLRLTRLLSCAAR
VFCVALQRGCLYVFAERDERRRLCLRAAFVERACNNSPKCCIRPRLS*
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mRNA from alignment at tig00000069_pilon:598362..598805-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5147.t1 ID=Ggra5147.t1|Name=Ggra5147.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=444bp|location=Sequence derived from alignment at tig00000069_pilon:598362..598805- (Gracilaria gracilis GNS1m male)
ATGGGCGCCGCAACACCCGCGCGCCAACAAATCGTGTGGCGCGGGCAGAT
GCGCTTCATCGCGCCCACGTCGCACTACGGCGCGCGCGCGCTGGCGCTCA
GCGCGCGCGCCATGGAGGCGGGCAGTCTGCCGCGCACGCTGGATCTGCAC
GGCAGTCGCACGCTGCCGCGCGCCGACGTGGCGCCGCTCATCCGCGCCGC
GCCCGTGCAGCTGCGGCTGCTGTGCGTGGACCGCCACGACGTGCGCACGG
CCGATGTGCGCGTGCTGCGCCTCACGCGCCTGCTCAGTTGCGCTGCGCGC
GTGTTCTGCGTCGCGCTGCAGCGCGGCTGCCTGTACGTGTTCGCCGAGCG
CGATGAGCGTCGCCGCCTTTGTCTGCGCGCCGCCTTTGTTGAGCGCGCTT
GCAACAACTCTCCCAAGTGTTGCATACGTCCGCGTCTGTCCTAA
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Coding sequence (CDS) from alignment at tig00000069_pilon:598362..598805-

>Ggra5147.t1 ID=Ggra5147.t1|Name=Ggra5147.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=444bp|location=Sequence derived from alignment at tig00000069_pilon:598362..598805- (Gracilaria gracilis GNS1m male)
ATGGGCGCCGCAACACCCGCGCGCCAACAAATCGTGTGGCGCGGGCAGAT
GCGCTTCATCGCGCCCACGTCGCACTACGGCGCGCGCGCGCTGGCGCTCA
GCGCGCGCGCCATGGAGGCGGGCAGTCTGCCGCGCACGCTGGATCTGCAC
GGCAGTCGCACGCTGCCGCGCGCCGACGTGGCGCCGCTCATCCGCGCCGC
GCCCGTGCAGCTGCGGCTGCTGTGCGTGGACCGCCACGACGTGCGCACGG
CCGATGTGCGCGTGCTGCGCCTCACGCGCCTGCTCAGTTGCGCTGCGCGC
GTGTTCTGCGTCGCGCTGCAGCGCGGCTGCCTGTACGTGTTCGCCGAGCG
CGATGAGCGTCGCCGCCTTTGTCTGCGCGCCGCCTTTGTTGAGCGCGCTT
GCAACAACTCTCCCAAGTGTTGCATACGTCCGCGTCTGTCCTAA
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