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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2850.Phatr48253 |
| PFAMs | BACK,BTB,Kelch_1,Kelch_4,Kelch_6 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K10442,ko:K20285,ko:K21912 |
| Evalue | 1.91e-22 |
| EggNOG OGs | KOG4441@1|root,KOG4441@2759|Eukaryota |
| Description | protein ubiquitination |
| COG category | KLT |
| BRITE | ko00000,ko04121,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5145.t1.stop1 | Ggra5145.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000069_pilon 592171..592173 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5145.t1.start1 | Ggra5145.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000069_pilon 594628..594630 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5145.t1 ID=Ggra5145.t1|Name=Ggra5145.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=820bp MSCVKPFWLACLACLLLCVAAETPLRQLSFLPKGPGRPAFVAPQIQLPTL PSSSTSDAPPAAPAPAPASAPAPAPAPALADAPPAQAEADTDAAQDAVDA DVVDTDAIDTDAVNVDVDVAQVDSVESSETQQSPAAVPSASPSASPPPSV SPVALAPTVSPAPSAAPVADAVLAPVVQPPPSVLTPIPTAAGNGQGYFPC HPNKATKQTTVTCTHVQMPPAMCSRCALKPVTAQGMFKRCDDIFELETPP CQQALDEYVALNGACDPVRTSHVAAWKAGDAAAATELDYFLYSVCELCCD CVPMGTAVDEYASLKAAHTPQNPTLWAVDRGNCPAHAEYDLCNVLPNVQA VIKPGEPVIAKPSACPPLSVWLNSDRSTNWQVNPDASIDASTRDFLNSAL NALECDGESVWRTCYHMEDLQNHIDIPQDVASVPVQDDTAAAQLTTPAVV TDPTAAADPVTPAAVPVSPATPATAAPAAPVPAAPVPAAPEPAAPEPAAP EPAAPEPAAPEPAAAAPSAPTPVAPAPAAPAPAAPAPAAPAPAAPASPAT ATDKDSATADAPASTAPITPIAATTTTDTASTSTTSAPDDTTTALPASDG ETTDGASPMTVGGQENGIYGSPSPSPASDGGSCFPASATVELHSGLHIPM HQLRIGDRVRVSADQFSEVYMFSHRDVKASDPSYVRIFTMEASVTMTAGH YLPVVKNVTRTGNIFVQAESVEIGDRLQLASGQWSFVTDVLPTEAIGLFN PHTLAGTICVDGVVASTFTRSVSADAAQALLSPIRALYWLGIAGERLAGN WFVQGVDRSLTSFAQTIRL* back to topspliced messenger RNA >Ggra5145.t1 ID=Ggra5145.t1|Name=Ggra5145.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2460bp|location=Sequence derived from alignment at tig00000069_pilon:592171..594630- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGAGCTGTGTCAAGCCCTTCTGGCTCGCTTGCCTTGCTTGCTTGCTGCT TTGCGTCGCCGCCGAGACGCCGCTGCGACAGCTCTCTTTTTTGCCAAAGG GACCGGGGCGTCCTGCCTTTGTTGCGCCTCAAATTCAGCTTCCCACTCTG CCGTCATCGTCCACATCCGACGCGCCGCCTGCTGCACCAGCTCCCGCTCC CGCTTCCGCTCCTGCGCCTGCGCCTGCGCCTGCTCTTGCTGACGCCCCGC CGGCTCAAGCAGAGGCTGATACCGACGCTGCTCAAGATGCCGTCGATGCC GATGTCGTCGATACCGATGCCATCGATACTGATGCCGTCAATGTCGATGT CGATGTCGCCCAAGTCGACTCCGTTGAATCGTCCGAAACTCAGCAGTCAC CAGCTGCTGTACCATCTGCCTCACCATCAGCGTCGCCACCGCCTTCCGTA TCTCCAGTTGCATTAGCACCCACCGTATCGCCTGCACCTTCTGCTGCTCC TGTTGCTGATGCTGTTCTCGCTCCTGTCGTACAGCCACCGCCGTCTGTGC TTACCCCAATTCCCACCGCCGCTGGCAATGGCCAGGGTTACTTCCCGTGC CATCCGAACAAGGCCACCAAGCAGACCACCGTCACCTGTACGCATGTTCA AATGCCCCCAGCCATGTGTTCGCGATGCGCTTTGAAGCCGGTTACCGCTC AAGGCATGTTCAAGCGTTGCGACGATATCTTTGAGCTTGAAACACCGCCT TGTCAACAAGCGCTTGACGAATATGTCGCTCTTAATGGCGCTTGTGACCC TGTTAGAACGAGCCATGTAGCCGCGTGGAAGGCCGGAGACGCCGCCGCTG CCACAGAGCTTGATTACTTTTTGTACTCTGTTTGTGAGCTTTGCTGCGAT TGTGTTCCGATGGGTACTGCTGTCGATGAGTATGCGTCGTTGAAGGCCGC TCACACGCCGCAAAACCCAACGCTCTGGGCTGTTGATAGGGGAAATTGTC CGGCTCATGCCGAGTATGACCTTTGCAACGTGCTCCCCAATGTGCAAGCT GTTATCAAGCCTGGCGAGCCTGTAATCGCAAAACCGTCAGCTTGTCCGCC TCTGAGCGTTTGGCTCAATTCGGACCGCTCTACAAACTGGCAAGTCAATC CAGATGCCTCAATCGACGCTTCCACCAGGGATTTCTTGAACAGCGCTCTC AATGCATTGGAATGCGATGGCGAGAGCGTTTGGCGCACTTGCTATCATAT GGAGGATTTGCAAAACCACATTGACATTCCCCAAGATGTTGCTTCTGTTC CTGTGCAGGATGATACTGCCGCCGCACAGCTTACTACACCTGCTGTCGTT ACCGACCCTACCGCCGCTGCAGATCCTGTCACCCCTGCAGCGGTTCCTGT TAGCCCTGCAACCCCTGCCACTGCTGCGCCTGCCGCTCCCGTGCCTGCCG CTCCCGTGCCTGCCGCTCCCGAGCCTGCCGCTCCCGAGCCTGCCGCTCCC GAGCCTGCCGCTCCCGAGCCTGCCGCTCCCGAGCCTGCAGCTGCTGCGCC GTCGGCTCCTACGCCTGTGGCTCCTGCGCCTGCAGCTCCTGCTCCCGCAG CTCCCGCTCCCGCAGCTCCCGCTCCTGCGGCGCCTGCGTCACCTGCGACA GCTACTGACAAAGACTCCGCTACAGCTGATGCCCCCGCTTCTACAGCACC TATCACTCCCATTGCTGCTACCACGACTACTGACACTGCAAGTACATCAA CTACTTCTGCACCAGATGATACCACTACTGCTCTTCCGGCATCTGACGGC GAGACCACTGATGGGGCGTCGCCGATGACTGTTGGTGGCCAAGAGAATGG AATATATGGTTCTCCGTCTCCTTCTCCTGCCAGCGATGGAGGCTCCTGTT TCCCTGCCAGCGCTACAGTTGAGCTCCACTCTGGATTACACATTCCGATG CACCAACTCAGAATTGGTGATCGTGTTCGCGTGTCTGCTGATCAGTTTTC AGAGGTTTACATGTTTTCACACCGCGATGTCAAAGCTTCAGATCCGTCAT ACGTACGCATCTTCACGATGGAGGCTTCTGTAACAATGACAGCAGGACAC TACCTGCCAGTCGTCAAGAACGTCACAAGAACAGGCAACATATTTGTACA GGCAGAGTCCGTTGAGATTGGAGATCGTTTGCAGCTTGCTTCTGGGCAAT GGTCGTTTGTAACTGATGTTCTGCCGACTGAAGCAATTGGTTTGTTCAAC CCCCATACTTTGGCGGGTACTATCTGTGTGGATGGTGTGGTGGCATCGAC TTTCACTCGTTCCGTGTCTGCAGATGCTGCGCAGGCCTTGTTATCGCCGA TTAGAGCCTTGTATTGGTTGGGAATTGCTGGTGAGAGACTCGCAGGGAAC TGGTTTGTGCAAGGTGTTGATCGAAGCTTGACATCCTTTGCTCAAACAAT TCGACTGTGA back to topprotein sequence of Ggra5145.t1 >Ggra5145.t1 ID=Ggra5145.t1|Name=Ggra5145.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=820bp
MSCVKPFWLACLACLLLCVAAETPLRQLSFLPKGPGRPAFVAPQIQLPTL PSSSTSDAPPAAPAPAPASAPAPAPAPALADAPPAQAEADTDAAQDAVDA DVVDTDAIDTDAVNVDVDVAQVDSVESSETQQSPAAVPSASPSASPPPSV SPVALAPTVSPAPSAAPVADAVLAPVVQPPPSVLTPIPTAAGNGQGYFPC HPNKATKQTTVTCTHVQMPPAMCSRCALKPVTAQGMFKRCDDIFELETPP CQQALDEYVALNGACDPVRTSHVAAWKAGDAAAATELDYFLYSVCELCCD CVPMGTAVDEYASLKAAHTPQNPTLWAVDRGNCPAHAEYDLCNVLPNVQA VIKPGEPVIAKPSACPPLSVWLNSDRSTNWQVNPDASIDASTRDFLNSAL NALECDGESVWRTCYHMEDLQNHIDIPQDVASVPVQDDTAAAQLTTPAVV TDPTAAADPVTPAAVPVSPATPATAAPAAPVPAAPVPAAPEPAAPEPAAP EPAAPEPAAPEPAAAAPSAPTPVAPAPAAPAPAAPAPAAPAPAAPASPAT ATDKDSATADAPASTAPITPIAATTTTDTASTSTTSAPDDTTTALPASDG ETTDGASPMTVGGQENGIYGSPSPSPASDGGSCFPASATVELHSGLHIPM HQLRIGDRVRVSADQFSEVYMFSHRDVKASDPSYVRIFTMEASVTMTAGH YLPVVKNVTRTGNIFVQAESVEIGDRLQLASGQWSFVTDVLPTEAIGLFN PHTLAGTICVDGVVASTFTRSVSADAAQALLSPIRALYWLGIAGERLAGN WFVQGVDRSLTSFAQTIRL* back to topmRNA from alignment at tig00000069_pilon:592171..594630- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5145.t1 ID=Ggra5145.t1|Name=Ggra5145.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2460bp|location=Sequence derived from alignment at tig00000069_pilon:592171..594630- (Gracilaria gracilis GNS1m male) ATGAGCTGTGTCAAGCCCTTCTGGCTCGCTTGCCTTGCTTGCTTGCTGCT
TTGCGTCGCCGCCGAGACGCCGCTGCGACAGCTCTCTTTTTTGCCAAAGG
GACCGGGGCGTCCTGCCTTTGTTGCGCCTCAAATTCAGCTTCCCACTCTG
CCGTCATCGTCCACATCCGACGCGCCGCCTGCTGCACCAGCTCCCGCTCC
CGCTTCCGCTCCTGCGCCTGCGCCTGCGCCTGCTCTTGCTGACGCCCCGC
CGGCTCAAGCAGAGGCTGATACCGACGCTGCTCAAGATGCCGTCGATGCC
GATGTCGTCGATACCGATGCCATCGATACTGATGCCGTCAATGTCGATGT
CGATGTCGCCCAAGTCGACTCCGTTGAATCGTCCGAAACTCAGCAGTCAC
CAGCTGCTGTACCATCTGCCTCACCATCAGCGTCGCCACCGCCTTCCGTA
TCTCCAGTTGCATTAGCACCCACCGTATCGCCTGCACCTTCTGCTGCTCC
TGTTGCTGATGCTGTTCTCGCTCCTGTCGTACAGCCACCGCCGTCTGTGC
TTACCCCAATTCCCACCGCCGCTGGCAATGGCCAGGGTTACTTCCCGTGC
CATCCGAACAAGGCCACCAAGCAGACCACCGTCACCTGTACGCATGTTCA
AATGCCCCCAGCCATGTGTTCGCGATGCGCTTTGAAGCCGGTTACCGCTC
AAGGCATGTTCAAGCGTTGCGACGATATCTTTGAGCTTGAAACACCGCCT
TGTCAACAAGCGCTTGACGAATATGTCGCTCTTAATGGCGCTTGTGACCC
TGTTAGAACGAGCCATGTAGCCGCGTGGAAGGCCGGAGACGCCGCCGCTG
CCACAGAGCTTGATTACTTTTTGTACTCTGTTTGTGAGCTTTGCTGCGAT
TGTGTTCCGATGGGTACTGCTGTCGATGAGTATGCGTCGTTGAAGGCCGC
TCACACGCCGCAAAACCCAACGCTCTGGGCTGTTGATAGGGGAAATTGTC
CGGCTCATGCCGAGTATGACCTTTGCAACGTGCTCCCCAATGTGCAAGCT
GTTATCAAGCCTGGCGAGCCTGTAATCGCAAAACCGTCAGCTTGTCCGCC
TCTGAGCGTTTGGCTCAATTCGGACCGCTCTACAAACTGGCAAGTCAATC
CAGATGCCTCAATCGACGCTTCCACCAGGGATTTCTTGAACAGCGCTCTC
AATGCATTGGAATGCGATGGCGAGAGCGTTTGGCGCACTTGCTATCATAT
GGAGGATTTGCAAAACCACATTGACATTCCCCAAGATGTTGCTTCTGTTC
CTGTGCAGGATGATACTGCCGCCGCACAGCTTACTACACCTGCTGTCGTT
ACCGACCCTACCGCCGCTGCAGATCCTGTCACCCCTGCAGCGGTTCCTGT
TAGCCCTGCAACCCCTGCCACTGCTGCGCCTGCCGCTCCCGTGCCTGCCG
CTCCCGTGCCTGCCGCTCCCGAGCCTGCCGCTCCCGAGCCTGCCGCTCCC
GAGCCTGCCGCTCCCGAGCCTGCCGCTCCCGAGCCTGCAGCTGCTGCGCC
GTCGGCTCCTACGCCTGTGGCTCCTGCGCCTGCAGCTCCTGCTCCCGCAG
CTCCCGCTCCCGCAGCTCCCGCTCCTGCGGCGCCTGCGTCACCTGCGACA
GCTACTGACAAAGACTCCGCTACAGCTGATGCCCCCGCTTCTACAGCACC
TATCACTCCCATTGCTGCTACCACGACTACTGACACTGCAAGTACATCAA
CTACTTCTGCACCAGATGATACCACTACTGCTCTTCCGGCATCTGACGGC
GAGACCACTGATGGGGCGTCGCCGATGACTGTTGGTGGCCAAGAGAATGG
AATATATGGTTCTCCGTCTCCTTCTCCTGCCAGCGATGGAGGCTCCTGTT
TCCCTGCCAGCGCTACAGTTGAGCTCCACTCTGGATTACACATTCCGATG
CACCAACTCAGAATTGGTGATCGTGTTCGCGTGTCTGCTGATCAGTTTTC
AGAGGTTTACATGTTTTCACACCGCGATGTCAAAGCTTCAGATCCGTCAT
ACGTACGCATCTTCACGATGGAGGCTTCTGTAACAATGACAGCAGGACAC
TACCTGCCAGTCGTCAAGAACGTCACAAGAACAGGCAACATATTTGTACA
GGCAGAGTCCGTTGAGATTGGAGATCGTTTGCAGCTTGCTTCTGGGCAAT
GGTCGTTTGTAACTGATGTTCTGCCGACTGAAGCAATTGGTTTGTTCAAC
CCCCATACTTTGGCGGGTACTATCTGTGTGGATGGTGTGGTGGCATCGAC
TTTCACTCGTTCCGTGTCTGCAGATGCTGCGCAGGCCTTGTTATCGCCGA
TTAGAGCCTTGTATTGGTTGGGAATTGCTGGTGAGAGACTCGCAGGGAAC
TGGTTTGTGCAAGGTGTTGATCGAAGCTTGACATCCTTTGCTCAAACAAT
TCGACTGTGA back to topCoding sequence (CDS) from alignment at tig00000069_pilon:592171..594630- >Ggra5145.t1 ID=Ggra5145.t1|Name=Ggra5145.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2460bp|location=Sequence derived from alignment at tig00000069_pilon:592171..594630- (Gracilaria gracilis GNS1m male) ATGAGCTGTGTCAAGCCCTTCTGGCTCGCTTGCCTTGCTTGCTTGCTGCT TTGCGTCGCCGCCGAGACGCCGCTGCGACAGCTCTCTTTTTTGCCAAAGG GACCGGGGCGTCCTGCCTTTGTTGCGCCTCAAATTCAGCTTCCCACTCTG CCGTCATCGTCCACATCCGACGCGCCGCCTGCTGCACCAGCTCCCGCTCC CGCTTCCGCTCCTGCGCCTGCGCCTGCGCCTGCTCTTGCTGACGCCCCGC CGGCTCAAGCAGAGGCTGATACCGACGCTGCTCAAGATGCCGTCGATGCC GATGTCGTCGATACCGATGCCATCGATACTGATGCCGTCAATGTCGATGT CGATGTCGCCCAAGTCGACTCCGTTGAATCGTCCGAAACTCAGCAGTCAC CAGCTGCTGTACCATCTGCCTCACCATCAGCGTCGCCACCGCCTTCCGTA TCTCCAGTTGCATTAGCACCCACCGTATCGCCTGCACCTTCTGCTGCTCC TGTTGCTGATGCTGTTCTCGCTCCTGTCGTACAGCCACCGCCGTCTGTGC TTACCCCAATTCCCACCGCCGCTGGCAATGGCCAGGGTTACTTCCCGTGC CATCCGAACAAGGCCACCAAGCAGACCACCGTCACCTGTACGCATGTTCA AATGCCCCCAGCCATGTGTTCGCGATGCGCTTTGAAGCCGGTTACCGCTC AAGGCATGTTCAAGCGTTGCGACGATATCTTTGAGCTTGAAACACCGCCT TGTCAACAAGCGCTTGACGAATATGTCGCTCTTAATGGCGCTTGTGACCC TGTTAGAACGAGCCATGTAGCCGCGTGGAAGGCCGGAGACGCCGCCGCTG CCACAGAGCTTGATTACTTTTTGTACTCTGTTTGTGAGCTTTGCTGCGAT TGTGTTCCGATGGGTACTGCTGTCGATGAGTATGCGTCGTTGAAGGCCGC TCACACGCCGCAAAACCCAACGCTCTGGGCTGTTGATAGGGGAAATTGTC CGGCTCATGCCGAGTATGACCTTTGCAACGTGCTCCCCAATGTGCAAGCT GTTATCAAGCCTGGCGAGCCTGTAATCGCAAAACCGTCAGCTTGTCCGCC TCTGAGCGTTTGGCTCAATTCGGACCGCTCTACAAACTGGCAAGTCAATC CAGATGCCTCAATCGACGCTTCCACCAGGGATTTCTTGAACAGCGCTCTC AATGCATTGGAATGCGATGGCGAGAGCGTTTGGCGCACTTGCTATCATAT GGAGGATTTGCAAAACCACATTGACATTCCCCAAGATGTTGCTTCTGTTC CTGTGCAGGATGATACTGCCGCCGCACAGCTTACTACACCTGCTGTCGTT ACCGACCCTACCGCCGCTGCAGATCCTGTCACCCCTGCAGCGGTTCCTGT TAGCCCTGCAACCCCTGCCACTGCTGCGCCTGCCGCTCCCGTGCCTGCCG CTCCCGTGCCTGCCGCTCCCGAGCCTGCCGCTCCCGAGCCTGCCGCTCCC GAGCCTGCCGCTCCCGAGCCTGCCGCTCCCGAGCCTGCAGCTGCTGCGCC GTCGGCTCCTACGCCTGTGGCTCCTGCGCCTGCAGCTCCTGCTCCCGCAG CTCCCGCTCCCGCAGCTCCCGCTCCTGCGGCGCCTGCGTCACCTGCGACA GCTACTGACAAAGACTCCGCTACAGCTGATGCCCCCGCTTCTACAGCACC TATCACTCCCATTGCTGCTACCACGACTACTGACACTGCAAGTACATCAA CTACTTCTGCACCAGATGATACCACTACTGCTCTTCCGGCATCTGACGGC GAGACCACTGATGGGGCGTCGCCGATGACTGTTGGTGGCCAAGAGAATGG AATATATGGTTCTCCGTCTCCTTCTCCTGCCAGCGATGGAGGCTCCTGTT TCCCTGCCAGCGCTACAGTTGAGCTCCACTCTGGATTACACATTCCGATG CACCAACTCAGAATTGGTGATCGTGTTCGCGTGTCTGCTGATCAGTTTTC AGAGGTTTACATGTTTTCACACCGCGATGTCAAAGCTTCAGATCCGTCAT ACGTACGCATCTTCACGATGGAGGCTTCTGTAACAATGACAGCAGGACAC TACCTGCCAGTCGTCAAGAACGTCACAAGAACAGGCAACATATTTGTACA GGCAGAGTCCGTTGAGATTGGAGATCGTTTGCAGCTTGCTTCTGGGCAAT GGTCGTTTGTAACTGATGTTCTGCCGACTGAAGCAATTGGTTTGTTCAAC CCCCATACTTTGGCGGGTACTATCTGTGTGGATGGTGTGGTGGCATCGAC TTTCACTCGTTCCGTGTCTGCAGATGCTGCGCAGGCCTTGTTATCGCCGA TTAGAGCCTTGTATTGGTTGGGAATTGCTGGTGAGAGACTCGCAGGGAAC TGGTTTGTGCAAGGTGTTGATCGAAGCTTGACATCCTTTGCTCAAACAAT TCGACTGTGA back to top
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