Ggra4953.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4953.t1
Unique NameGgra4953.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length199
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000014_piloncontigtig00000014_pilon:118719..119315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4953Ggra4953Gracilaria gracilis GNS1m malegenetig00000014_pilon 118719..119315 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4953.t1.stop1Ggra4953.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000014_pilon 118719..118721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4953.t1.CDS1Ggra4953.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000014_pilon 118719..119315 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4953.t1.exon1Ggra4953.t1.exon1Gracilaria gracilis GNS1m maleexontig00000014_pilon 118719..119315 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4953.t1.start1Ggra4953.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000014_pilon 119313..119315 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4953.t1Ggra4953.t1Gracilaria gracilis GNS1m malepolypeptidetig00000014_pilon 118719..119315 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4953.t1 ID=Ggra4953.t1|Name=Ggra4953.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=199bp
MRGSGNNEDSELHDVNVGKDVERGPGIDQHIISQDENECIMSQPPVSQDV
YAFFVALNNSSLQLFPGIKEPEANLHPACSILVQHCIKNQMPLNECAREA
HMLFEVEQHNPHSVRSVRDQFQTADKFCKYVDQVQKYRVHKERRRKASIR
TAYGTNNTGVYRSSLKLMLEELRKSGGASAIQELSAQFNSSDGICSSP*
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spliced messenger RNA

>Ggra4953.t1 ID=Ggra4953.t1|Name=Ggra4953.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=597bp|location=Sequence derived from alignment at tig00000014_pilon:118719..119315- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGAGGGTCTGGCAATAACGAAGATAGCGAACTTCACGACGTTAACGT
TGGAAAAGACGTTGAGCGAGGTCCCGGCATAGACCAACATATAATCTCTC
AAGATGAAAATGAATGCATTATGTCACAGCCTCCTGTCTCTCAAGATGTT
TATGCCTTCTTTGTGGCCTTGAACAATTCTTCACTCCAATTATTCCCGGG
CATAAAAGAACCAGAAGCCAACTTGCATCCCGCATGTTCTATTCTGGTGC
AACATTGCATCAAAAACCAAATGCCGCTCAACGAGTGCGCGAGGGAGGCG
CACATGCTGTTTGAAGTGGAACAGCATAATCCACATTCTGTGCGGTCCGT
CCGGGACCAGTTTCAAACAGCAGATAAGTTCTGCAAATATGTTGACCAAG
TTCAAAAGTACCGCGTTCACAAAGAAAGAAGGAGAAAGGCGTCGATAAGG
ACTGCATACGGTACGAACAATACAGGAGTTTACCGTTCCTCATTGAAGTT
AATGTTAGAGGAGCTTAGAAAATCTGGTGGTGCAAGTGCAATTCAAGAGT
TAAGTGCGCAATTCAATAGTTCTGATGGAATCTGTTCATCTCCATAG
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protein sequence of Ggra4953.t1

>Ggra4953.t1 ID=Ggra4953.t1|Name=Ggra4953.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=199bp
MRGSGNNEDSELHDVNVGKDVERGPGIDQHIISQDENECIMSQPPVSQDV
YAFFVALNNSSLQLFPGIKEPEANLHPACSILVQHCIKNQMPLNECAREA
HMLFEVEQHNPHSVRSVRDQFQTADKFCKYVDQVQKYRVHKERRRKASIR
TAYGTNNTGVYRSSLKLMLEELRKSGGASAIQELSAQFNSSDGICSSP*
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mRNA from alignment at tig00000014_pilon:118719..119315-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4953.t1 ID=Ggra4953.t1|Name=Ggra4953.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=597bp|location=Sequence derived from alignment at tig00000014_pilon:118719..119315- (Gracilaria gracilis GNS1m male)
ATGCGAGGGTCTGGCAATAACGAAGATAGCGAACTTCACGACGTTAACGT
TGGAAAAGACGTTGAGCGAGGTCCCGGCATAGACCAACATATAATCTCTC
AAGATGAAAATGAATGCATTATGTCACAGCCTCCTGTCTCTCAAGATGTT
TATGCCTTCTTTGTGGCCTTGAACAATTCTTCACTCCAATTATTCCCGGG
CATAAAAGAACCAGAAGCCAACTTGCATCCCGCATGTTCTATTCTGGTGC
AACATTGCATCAAAAACCAAATGCCGCTCAACGAGTGCGCGAGGGAGGCG
CACATGCTGTTTGAAGTGGAACAGCATAATCCACATTCTGTGCGGTCCGT
CCGGGACCAGTTTCAAACAGCAGATAAGTTCTGCAAATATGTTGACCAAG
TTCAAAAGTACCGCGTTCACAAAGAAAGAAGGAGAAAGGCGTCGATAAGG
ACTGCATACGGTACGAACAATACAGGAGTTTACCGTTCCTCATTGAAGTT
AATGTTAGAGGAGCTTAGAAAATCTGGTGGTGCAAGTGCAATTCAAGAGT
TAAGTGCGCAATTCAATAGTTCTGATGGAATCTGTTCATCTCCATAG
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Coding sequence (CDS) from alignment at tig00000014_pilon:118719..119315-

>Ggra4953.t1 ID=Ggra4953.t1|Name=Ggra4953.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=597bp|location=Sequence derived from alignment at tig00000014_pilon:118719..119315- (Gracilaria gracilis GNS1m male)
ATGCGAGGGTCTGGCAATAACGAAGATAGCGAACTTCACGACGTTAACGT
TGGAAAAGACGTTGAGCGAGGTCCCGGCATAGACCAACATATAATCTCTC
AAGATGAAAATGAATGCATTATGTCACAGCCTCCTGTCTCTCAAGATGTT
TATGCCTTCTTTGTGGCCTTGAACAATTCTTCACTCCAATTATTCCCGGG
CATAAAAGAACCAGAAGCCAACTTGCATCCCGCATGTTCTATTCTGGTGC
AACATTGCATCAAAAACCAAATGCCGCTCAACGAGTGCGCGAGGGAGGCG
CACATGCTGTTTGAAGTGGAACAGCATAATCCACATTCTGTGCGGTCCGT
CCGGGACCAGTTTCAAACAGCAGATAAGTTCTGCAAATATGTTGACCAAG
TTCAAAAGTACCGCGTTCACAAAGAAAGAAGGAGAAAGGCGTCGATAAGG
ACTGCATACGGTACGAACAATACAGGAGTTTACCGTTCCTCATTGAAGTT
AATGTTAGAGGAGCTTAGAAAATCTGGTGGTGCAAGTGCAATTCAAGAGT
TAAGTGCGCAATTCAATAGTTCTGATGGAATCTGTTCATCTCCATAG
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