|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703958.1 |
| Preferred name | srk1 |
| PFAMs | Pkinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K08286,ko:K08794 |
| KEGG Pathway | ko04921,ko04925,map04921,map04925 |
| GOs | GO:0000166,GO:0000935,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0007154,GO:0007165,GO:0007231,GO:0007346,GO:0008144,GO:0008150,GO:0008152,GO:0009628,GO:0009987,GO:0010389,GO:0010515,GO:0010564,GO:0010948,GO:0010972,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019538,GO:0023052,GO:0030428,GO:0030554,GO:0031135,GO:0031137,GO:0031138,GO:0031647,GO:0031974,GO:0031981,GO:0032092,GO:0032153,GO:0032155,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0033043,GO:0033554,GO:0034399,GO:0034599,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0040020,GO:0042221,GO:0042763,GO:0042764,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043412,GO:0043900,GO:0043901,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045786,GO:0045930,GO:0046999,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051098,GO:0051099,GO:0051128,GO:0051285,GO:0051286,GO:0051445,GO:0051716,GO:0051726,GO:0051783,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0072324,GO:0097159,GO:0097367,GO:0099568,GO:0099738,GO:0104004,GO:0140096,GO:1900180,GO:1900181,GO:1901265,GO:1901363,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903827,GO:1903828,GO:2000241,GO:2000242 |
| Evalue | 9.31e-97 |
| EggNOG OGs | KOG0032@1|root,KOG0032@2759|Eukaryota |
| EC | 2.7.11.17 |
| Description | protein serine/threonine kinase activity |
| COG category | T |
| BRITE | ko00000,ko00001,ko01000,ko01001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4938.t1.stop1 | Ggra4938.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000157_pilon 285863..285865 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra4938.t1.start1 | Ggra4938.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000157_pilon 288020..288022 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra4938.t1 ID=Ggra4938.t1|Name=Ggra4938.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=720bp MAAPPSSSSTRHRDAEADARLLLAHHARATSPLRYTAVEPVCIEGWLAKE GRSIRTRRNRYFTLNGTVLASHRSKGGAPSWHLSVADALVQRGLLPREIR ISLQRRAFSFVAPTRAAFHMWIVALRRASLVSTRVDQYYSIGRLIGEGMN GQVRLAHDKMTDEAVAIKMVPRLGRHNETHFLAREVQIILSVSHPNIVRT IDVFVRSRRIHFVMEYLPGGELFDFISHNTHFTETHAAAVITDLLNALHY LHSRNIVHRDVKLENLLCANTTWPLNVKLADFGFANYLHSDNRPSLNSFV GTPYYIAPEMLRGDAHGCPVDVWASGVVMYILLSGKFPFGGNNESEYYQR VLAKNAYFPAEEWADVSDHAKSLVRGMLCKDPHKRLTVEQCLRHPWLARA QPLLDGSTARALSPPEQLLASERSLQTATALRHNRTKRGKWRYLAMLNRS LSGAPHAVMPEQLRVDHARAKHTLSESASTTAAATAAAMLSARSDAGSNS VAATDSELVNRRPSLIRRIMSSQKLSLDRYERQLASGGGGGGGDDDDKGH DASAANARKTLSLFSKHGAFRRSFHRAGDRGADDGINFVNSQSQRLPPKM ARERLRQQRLAAAAAKRAGRGGGGGALFGSCKLNAGEFGAHSQGGGYHSS PRLAAHLLEPLQTFVVPCSASEGAASGGAQSERMAIVDEHGEELQHGSYS RAGAGAGSGAGARAQPLGV* back to topspliced messenger RNA >Ggra4938.t1 ID=Ggra4938.t1|Name=Ggra4938.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2160bp|location=Sequence derived from alignment at tig00000157_pilon:285863..288022- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGGCCCCGCCGTCTTCCTCCTCTACGCGTCACCGCGATGCCGAAGC CGACGCGCGCCTGCTGCTGGCGCACCACGCGCGCGCCACGTCGCCGCTGC GCTACACCGCCGTGGAGCCGGTGTGCATCGAGGGCTGGCTGGCAAAAGAG GGGCGCTCCATCCGCACCCGCCGCAACCGCTACTTCACGCTCAACGGCAC CGTGTTGGCGTCGCACCGCTCCAAGGGCGGCGCGCCCAGCTGGCACCTGT CCGTGGCCGACGCGCTGGTGCAGCGCGGGCTGCTGCCGCGCGAGATCCGC ATCTCGCTGCAGCGCCGCGCCTTTTCCTTCGTCGCCCCGACGCGCGCGGC CTTCCACATGTGGATCGTCGCGCTGCGTCGCGCCTCGCTCGTCAGCACGC GCGTCGACCAGTACTACTCCATTGGCCGCCTCATCGGCGAGGGCATGAAC GGCCAGGTGCGCCTGGCGCACGACAAGATGACCGATGAGGCCGTGGCCAT CAAGATGGTGCCGCGCTTGGGTAGGCACAACGAGACCCACTTTTTGGCCA GGGAGGTGCAGATCATCCTTTCCGTGTCGCATCCCAACATTGTGCGCACC ATCGACGTGTTTGTGCGCTCGCGTCGCATCCACTTTGTCATGGAGTACCT GCCGGGCGGCGAGCTGTTCGACTTCATCTCACACAACACCCACTTTACCG AGACGCACGCCGCCGCCGTCATCACCGACTTGCTCAACGCCTTGCACTAC CTGCACTCGCGCAACATTGTTCACCGCGACGTCAAGCTGGAGAACCTGTT GTGCGCCAACACCACGTGGCCGCTCAACGTCAAGCTGGCCGACTTTGGCT TTGCAAACTACCTGCACAGCGACAACCGCCCGTCGCTCAACAGTTTTGTG GGCACGCCCTACTACATTGCGCCCGAGATGCTACGCGGCGACGCGCACGG CTGCCCCGTCGATGTGTGGGCCAGCGGCGTCGTCATGTACATTCTACTCA GCGGCAAGTTTCCCTTTGGCGGCAACAACGAATCCGAGTACTACCAGCGC GTGCTTGCAAAGAACGCGTACTTTCCCGCCGAGGAGTGGGCCGACGTGTC CGACCACGCCAAGAGCCTTGTGCGGGGCATGCTGTGCAAGGACCCTCACA AACGGCTCACCGTGGAGCAATGCCTGCGACACCCGTGGCTGGCGCGCGCA CAGCCGCTGCTGGATGGCAGCACAGCGCGCGCGCTGTCGCCGCCCGAGCA GCTGCTGGCGTCCGAGCGCAGCCTGCAAACCGCCACGGCGCTGCGACACA ACCGCACCAAGCGCGGCAAGTGGCGCTACCTGGCCATGCTCAACCGCTCG CTGTCCGGCGCGCCGCACGCGGTGATGCCCGAGCAGCTGCGCGTGGACCA CGCGCGCGCCAAGCACACGCTGTCCGAATCGGCGTCCACCACGGCGGCCG CCACGGCGGCCGCCATGCTGTCGGCGCGCAGCGACGCCGGCAGCAACTCG GTGGCCGCCACCGACTCGGAGCTGGTCAACAGGCGGCCCAGCCTGATTCG GCGCATCATGTCGTCGCAAAAGCTGTCGCTGGACCGGTACGAGCGGCAGC TGGCGTCCGGCGGCGGCGGCGGCGGCGGCGACGACGACGATAAGGGGCAT GACGCCTCCGCCGCGAATGCGCGCAAGACGCTGTCGCTGTTTTCGAAGCA CGGCGCGTTCAGACGGTCGTTCCACCGCGCGGGCGACCGCGGCGCGGACG ATGGCATCAACTTTGTGAACTCGCAGTCGCAGCGACTGCCGCCCAAGATG GCGCGCGAGCGGCTGCGGCAGCAGCGGCTAGCGGCCGCGGCGGCCAAACG CGCGGGCAGGGGCGGCGGTGGTGGTGCGCTGTTTGGCAGCTGCAAGCTGA ATGCGGGCGAGTTTGGGGCGCACAGTCAGGGCGGCGGGTATCACTCGTCG CCGCGACTGGCGGCGCACTTGCTGGAGCCGCTACAGACGTTTGTGGTGCC GTGCTCGGCGTCGGAGGGCGCGGCCAGCGGCGGGGCGCAGAGCGAACGCA TGGCGATTGTGGACGAGCATGGCGAAGAGCTGCAGCACGGCAGCTACTCG AGGGCGGGCGCGGGCGCGGGCTCGGGCGCGGGCGCGAGGGCGCAGCCGCT GGGCGTGTAG back to topprotein sequence of Ggra4938.t1 >Ggra4938.t1 ID=Ggra4938.t1|Name=Ggra4938.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=720bp
MAAPPSSSSTRHRDAEADARLLLAHHARATSPLRYTAVEPVCIEGWLAKE GRSIRTRRNRYFTLNGTVLASHRSKGGAPSWHLSVADALVQRGLLPREIR ISLQRRAFSFVAPTRAAFHMWIVALRRASLVSTRVDQYYSIGRLIGEGMN GQVRLAHDKMTDEAVAIKMVPRLGRHNETHFLAREVQIILSVSHPNIVRT IDVFVRSRRIHFVMEYLPGGELFDFISHNTHFTETHAAAVITDLLNALHY LHSRNIVHRDVKLENLLCANTTWPLNVKLADFGFANYLHSDNRPSLNSFV GTPYYIAPEMLRGDAHGCPVDVWASGVVMYILLSGKFPFGGNNESEYYQR VLAKNAYFPAEEWADVSDHAKSLVRGMLCKDPHKRLTVEQCLRHPWLARA QPLLDGSTARALSPPEQLLASERSLQTATALRHNRTKRGKWRYLAMLNRS LSGAPHAVMPEQLRVDHARAKHTLSESASTTAAATAAAMLSARSDAGSNS VAATDSELVNRRPSLIRRIMSSQKLSLDRYERQLASGGGGGGGDDDDKGH DASAANARKTLSLFSKHGAFRRSFHRAGDRGADDGINFVNSQSQRLPPKM ARERLRQQRLAAAAAKRAGRGGGGGALFGSCKLNAGEFGAHSQGGGYHSS PRLAAHLLEPLQTFVVPCSASEGAASGGAQSERMAIVDEHGEELQHGSYS RAGAGAGSGAGARAQPLGV* back to topmRNA from alignment at tig00000157_pilon:285863..288022- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra4938.t1 ID=Ggra4938.t1|Name=Ggra4938.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2160bp|location=Sequence derived from alignment at tig00000157_pilon:285863..288022- (Gracilaria gracilis GNS1m male) ATGGCGGCCCCGCCGTCTTCCTCCTCTACGCGTCACCGCGATGCCGAAGC
CGACGCGCGCCTGCTGCTGGCGCACCACGCGCGCGCCACGTCGCCGCTGC
GCTACACCGCCGTGGAGCCGGTGTGCATCGAGGGCTGGCTGGCAAAAGAG
GGGCGCTCCATCCGCACCCGCCGCAACCGCTACTTCACGCTCAACGGCAC
CGTGTTGGCGTCGCACCGCTCCAAGGGCGGCGCGCCCAGCTGGCACCTGT
CCGTGGCCGACGCGCTGGTGCAGCGCGGGCTGCTGCCGCGCGAGATCCGC
ATCTCGCTGCAGCGCCGCGCCTTTTCCTTCGTCGCCCCGACGCGCGCGGC
CTTCCACATGTGGATCGTCGCGCTGCGTCGCGCCTCGCTCGTCAGCACGC
GCGTCGACCAGTACTACTCCATTGGCCGCCTCATCGGCGAGGGCATGAAC
GGCCAGGTGCGCCTGGCGCACGACAAGATGACCGATGAGGCCGTGGCCAT
CAAGATGGTGCCGCGCTTGGGTAGGCACAACGAGACCCACTTTTTGGCCA
GGGAGGTGCAGATCATCCTTTCCGTGTCGCATCCCAACATTGTGCGCACC
ATCGACGTGTTTGTGCGCTCGCGTCGCATCCACTTTGTCATGGAGTACCT
GCCGGGCGGCGAGCTGTTCGACTTCATCTCACACAACACCCACTTTACCG
AGACGCACGCCGCCGCCGTCATCACCGACTTGCTCAACGCCTTGCACTAC
CTGCACTCGCGCAACATTGTTCACCGCGACGTCAAGCTGGAGAACCTGTT
GTGCGCCAACACCACGTGGCCGCTCAACGTCAAGCTGGCCGACTTTGGCT
TTGCAAACTACCTGCACAGCGACAACCGCCCGTCGCTCAACAGTTTTGTG
GGCACGCCCTACTACATTGCGCCCGAGATGCTACGCGGCGACGCGCACGG
CTGCCCCGTCGATGTGTGGGCCAGCGGCGTCGTCATGTACATTCTACTCA
GCGGCAAGTTTCCCTTTGGCGGCAACAACGAATCCGAGTACTACCAGCGC
GTGCTTGCAAAGAACGCGTACTTTCCCGCCGAGGAGTGGGCCGACGTGTC
CGACCACGCCAAGAGCCTTGTGCGGGGCATGCTGTGCAAGGACCCTCACA
AACGGCTCACCGTGGAGCAATGCCTGCGACACCCGTGGCTGGCGCGCGCA
CAGCCGCTGCTGGATGGCAGCACAGCGCGCGCGCTGTCGCCGCCCGAGCA
GCTGCTGGCGTCCGAGCGCAGCCTGCAAACCGCCACGGCGCTGCGACACA
ACCGCACCAAGCGCGGCAAGTGGCGCTACCTGGCCATGCTCAACCGCTCG
CTGTCCGGCGCGCCGCACGCGGTGATGCCCGAGCAGCTGCGCGTGGACCA
CGCGCGCGCCAAGCACACGCTGTCCGAATCGGCGTCCACCACGGCGGCCG
CCACGGCGGCCGCCATGCTGTCGGCGCGCAGCGACGCCGGCAGCAACTCG
GTGGCCGCCACCGACTCGGAGCTGGTCAACAGGCGGCCCAGCCTGATTCG
GCGCATCATGTCGTCGCAAAAGCTGTCGCTGGACCGGTACGAGCGGCAGC
TGGCGTCCGGCGGCGGCGGCGGCGGCGGCGACGACGACGATAAGGGGCAT
GACGCCTCCGCCGCGAATGCGCGCAAGACGCTGTCGCTGTTTTCGAAGCA
CGGCGCGTTCAGACGGTCGTTCCACCGCGCGGGCGACCGCGGCGCGGACG
ATGGCATCAACTTTGTGAACTCGCAGTCGCAGCGACTGCCGCCCAAGATG
GCGCGCGAGCGGCTGCGGCAGCAGCGGCTAGCGGCCGCGGCGGCCAAACG
CGCGGGCAGGGGCGGCGGTGGTGGTGCGCTGTTTGGCAGCTGCAAGCTGA
ATGCGGGCGAGTTTGGGGCGCACAGTCAGGGCGGCGGGTATCACTCGTCG
CCGCGACTGGCGGCGCACTTGCTGGAGCCGCTACAGACGTTTGTGGTGCC
GTGCTCGGCGTCGGAGGGCGCGGCCAGCGGCGGGGCGCAGAGCGAACGCA
TGGCGATTGTGGACGAGCATGGCGAAGAGCTGCAGCACGGCAGCTACTCG
AGGGCGGGCGCGGGCGCGGGCTCGGGCGCGGGCGCGAGGGCGCAGCCGCT
GGGCGTGTAG back to topCoding sequence (CDS) from alignment at tig00000157_pilon:285863..288022- >Ggra4938.t1 ID=Ggra4938.t1|Name=Ggra4938.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2160bp|location=Sequence derived from alignment at tig00000157_pilon:285863..288022- (Gracilaria gracilis GNS1m male) ATGGCGGCCCCGCCGTCTTCCTCCTCTACGCGTCACCGCGATGCCGAAGC CGACGCGCGCCTGCTGCTGGCGCACCACGCGCGCGCCACGTCGCCGCTGC GCTACACCGCCGTGGAGCCGGTGTGCATCGAGGGCTGGCTGGCAAAAGAG GGGCGCTCCATCCGCACCCGCCGCAACCGCTACTTCACGCTCAACGGCAC CGTGTTGGCGTCGCACCGCTCCAAGGGCGGCGCGCCCAGCTGGCACCTGT CCGTGGCCGACGCGCTGGTGCAGCGCGGGCTGCTGCCGCGCGAGATCCGC ATCTCGCTGCAGCGCCGCGCCTTTTCCTTCGTCGCCCCGACGCGCGCGGC CTTCCACATGTGGATCGTCGCGCTGCGTCGCGCCTCGCTCGTCAGCACGC GCGTCGACCAGTACTACTCCATTGGCCGCCTCATCGGCGAGGGCATGAAC GGCCAGGTGCGCCTGGCGCACGACAAGATGACCGATGAGGCCGTGGCCAT CAAGATGGTGCCGCGCTTGGGTAGGCACAACGAGACCCACTTTTTGGCCA GGGAGGTGCAGATCATCCTTTCCGTGTCGCATCCCAACATTGTGCGCACC ATCGACGTGTTTGTGCGCTCGCGTCGCATCCACTTTGTCATGGAGTACCT GCCGGGCGGCGAGCTGTTCGACTTCATCTCACACAACACCCACTTTACCG AGACGCACGCCGCCGCCGTCATCACCGACTTGCTCAACGCCTTGCACTAC CTGCACTCGCGCAACATTGTTCACCGCGACGTCAAGCTGGAGAACCTGTT GTGCGCCAACACCACGTGGCCGCTCAACGTCAAGCTGGCCGACTTTGGCT TTGCAAACTACCTGCACAGCGACAACCGCCCGTCGCTCAACAGTTTTGTG GGCACGCCCTACTACATTGCGCCCGAGATGCTACGCGGCGACGCGCACGG CTGCCCCGTCGATGTGTGGGCCAGCGGCGTCGTCATGTACATTCTACTCA GCGGCAAGTTTCCCTTTGGCGGCAACAACGAATCCGAGTACTACCAGCGC GTGCTTGCAAAGAACGCGTACTTTCCCGCCGAGGAGTGGGCCGACGTGTC CGACCACGCCAAGAGCCTTGTGCGGGGCATGCTGTGCAAGGACCCTCACA AACGGCTCACCGTGGAGCAATGCCTGCGACACCCGTGGCTGGCGCGCGCA CAGCCGCTGCTGGATGGCAGCACAGCGCGCGCGCTGTCGCCGCCCGAGCA GCTGCTGGCGTCCGAGCGCAGCCTGCAAACCGCCACGGCGCTGCGACACA ACCGCACCAAGCGCGGCAAGTGGCGCTACCTGGCCATGCTCAACCGCTCG CTGTCCGGCGCGCCGCACGCGGTGATGCCCGAGCAGCTGCGCGTGGACCA CGCGCGCGCCAAGCACACGCTGTCCGAATCGGCGTCCACCACGGCGGCCG CCACGGCGGCCGCCATGCTGTCGGCGCGCAGCGACGCCGGCAGCAACTCG GTGGCCGCCACCGACTCGGAGCTGGTCAACAGGCGGCCCAGCCTGATTCG GCGCATCATGTCGTCGCAAAAGCTGTCGCTGGACCGGTACGAGCGGCAGC TGGCGTCCGGCGGCGGCGGCGGCGGCGGCGACGACGACGATAAGGGGCAT GACGCCTCCGCCGCGAATGCGCGCAAGACGCTGTCGCTGTTTTCGAAGCA CGGCGCGTTCAGACGGTCGTTCCACCGCGCGGGCGACCGCGGCGCGGACG ATGGCATCAACTTTGTGAACTCGCAGTCGCAGCGACTGCCGCCCAAGATG GCGCGCGAGCGGCTGCGGCAGCAGCGGCTAGCGGCCGCGGCGGCCAAACG CGCGGGCAGGGGCGGCGGTGGTGGTGCGCTGTTTGGCAGCTGCAAGCTGA ATGCGGGCGAGTTTGGGGCGCACAGTCAGGGCGGCGGGTATCACTCGTCG CCGCGACTGGCGGCGCACTTGCTGGAGCCGCTACAGACGTTTGTGGTGCC GTGCTCGGCGTCGGAGGGCGCGGCCAGCGGCGGGGCGCAGAGCGAACGCA TGGCGATTGTGGACGAGCATGGCGAAGAGCTGCAGCACGGCAGCTACTCG AGGGCGGGCGCGGGCGCGGGCTCGGGCGCGGGCGCGAGGGCGCAGCCGCT GGGCGTGTAG back to top
|