Ggra4928.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4928.t1
Unique NameGgra4928.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length124
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:199641..200012 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4928Ggra4928Gracilaria gracilis GNS1m malegenetig00000157_pilon 199641..200012 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4928.t1.start1Ggra4928.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000157_pilon 199641..199643 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4928.t1.CDS1Ggra4928.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000157_pilon 199641..200012 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4928.t1.exon1Ggra4928.t1.exon1Gracilaria gracilis GNS1m maleexontig00000157_pilon 199641..200012 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4928.t1.stop1Ggra4928.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000157_pilon 200010..200012 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4928.t1Ggra4928.t1Gracilaria gracilis GNS1m malepolypeptidetig00000157_pilon 199641..200012 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4928.t1 ID=Ggra4928.t1|Name=Ggra4928.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=124bp
MRKRTISDNGLYLLGHHLQLGRCLPPRLVLIVAAPAITKRNEEVTEHSKE
EAARQARLEAKRIRNRKSATRSDEKLRAQLEAQQEEVVMLRKRVEEMTDK
RQVVLEEYRILRRQMEDSDLYLC*
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spliced messenger RNA

>Ggra4928.t1 ID=Ggra4928.t1|Name=Ggra4928.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp|location=Sequence derived from alignment at tig00000157_pilon:199641..200012+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCAAAAGAACCATTTCAGACAACGGCCTGTATTTATTAGGGCACCA
CCTGCAGCTTGGTCGTTGTCTCCCACCCAGACTTGTGCTCATTGTTGCTG
CGCCTGCTATTACAAAGCGGAATGAAGAGGTGACGGAGCACTCGAAGGAG
GAGGCGGCCCGTCAAGCAAGACTAGAAGCGAAGCGTATCAGGAATCGGAA
GAGTGCGACAAGAAGTGATGAAAAGCTTCGTGCTCAGCTTGAAGCGCAAC
AGGAAGAGGTGGTGATGCTGCGGAAGCGAGTAGAAGAAATGACAGACAAG
AGGCAAGTCGTGTTAGAAGAATACAGAATATTACGAAGACAAATGGAGGA
CTCTGATCTCTATTTATGTTAG
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protein sequence of Ggra4928.t1

>Ggra4928.t1 ID=Ggra4928.t1|Name=Ggra4928.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=124bp
MRKRTISDNGLYLLGHHLQLGRCLPPRLVLIVAAPAITKRNEEVTEHSKE
EAARQARLEAKRIRNRKSATRSDEKLRAQLEAQQEEVVMLRKRVEEMTDK
RQVVLEEYRILRRQMEDSDLYLC*
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mRNA from alignment at tig00000157_pilon:199641..200012+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4928.t1 ID=Ggra4928.t1|Name=Ggra4928.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp|location=Sequence derived from alignment at tig00000157_pilon:199641..200012+ (Gracilaria gracilis GNS1m male)
ATGCGCAAAAGAACCATTTCAGACAACGGCCTGTATTTATTAGGGCACCA
CCTGCAGCTTGGTCGTTGTCTCCCACCCAGACTTGTGCTCATTGTTGCTG
CGCCTGCTATTACAAAGCGGAATGAAGAGGTGACGGAGCACTCGAAGGAG
GAGGCGGCCCGTCAAGCAAGACTAGAAGCGAAGCGTATCAGGAATCGGAA
GAGTGCGACAAGAAGTGATGAAAAGCTTCGTGCTCAGCTTGAAGCGCAAC
AGGAAGAGGTGGTGATGCTGCGGAAGCGAGTAGAAGAAATGACAGACAAG
AGGCAAGTCGTGTTAGAAGAATACAGAATATTACGAAGACAAATGGAGGA
CTCTGATCTCTATTTATGTTAG
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Coding sequence (CDS) from alignment at tig00000157_pilon:199641..200012+

>Ggra4928.t1 ID=Ggra4928.t1|Name=Ggra4928.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=372bp|location=Sequence derived from alignment at tig00000157_pilon:199641..200012+ (Gracilaria gracilis GNS1m male)
ATGCGCAAAAGAACCATTTCAGACAACGGCCTGTATTTATTAGGGCACCA
CCTGCAGCTTGGTCGTTGTCTCCCACCCAGACTTGTGCTCATTGTTGCTG
CGCCTGCTATTACAAAGCGGAATGAAGAGGTGACGGAGCACTCGAAGGAG
GAGGCGGCCCGTCAAGCAAGACTAGAAGCGAAGCGTATCAGGAATCGGAA
GAGTGCGACAAGAAGTGATGAAAAGCTTCGTGCTCAGCTTGAAGCGCAAC
AGGAAGAGGTGGTGATGCTGCGGAAGCGAGTAGAAGAAATGACAGACAAG
AGGCAAGTCGTGTTAGAAGAATACAGAATATTACGAAGACAAATGGAGGA
CTCTGATCTCTATTTATGTTAG
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