Ggra4899.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4899.t1
Unique NameGgra4899.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length142
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000856_piloncontigtig00000856_pilon:321314..321739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4899Ggra4899Gracilaria gracilis GNS1m malegenetig00000856_pilon 321314..321739 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4899.t1.stop1Ggra4899.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000856_pilon 321314..321316 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4899.t1.CDS1Ggra4899.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000856_pilon 321314..321739 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4899.t1.exon1Ggra4899.t1.exon1Gracilaria gracilis GNS1m maleexontig00000856_pilon 321314..321739 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4899.t1.start1Ggra4899.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000856_pilon 321737..321739 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4899.t1Ggra4899.t1Gracilaria gracilis GNS1m malepolypeptidetig00000856_pilon 321314..321739 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4899.t1 ID=Ggra4899.t1|Name=Ggra4899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=142bp
MEQLTLMLKASTQITMKYSGMMNDIKRVLFVVTSSIDNVGHLRQEIKNVA
SKRRLIEPRDEEDILFEKSYISIDNMMAYIRGRGESMKSIINSDVKGESR
DLMISIARILNTEVAMDEAIDKGGTVMRFASKIRGKGHHQE*
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spliced messenger RNA

>Ggra4899.t1 ID=Ggra4899.t1|Name=Ggra4899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=426bp|location=Sequence derived from alignment at tig00000856_pilon:321314..321739- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCAACTAACTCTCATGCTGAAAGCAAGCACGCAGATCACCATGAA
ATACTCAGGTATGATGAACGATATTAAGCGTGTCTTGTTTGTCGTGACAT
CATCAATAGACAACGTGGGTCATCTTAGACAAGAAATTAAGAACGTTGCT
AGCAAGAGAAGGCTGATAGAGCCAAGAGATGAAGAAGACATTCTGTTTGA
GAAAAGCTACATTTCGATTGACAATATGATGGCGTATATTAGAGGACGAG
GAGAGAGTATGAAAAGCATCATCAACAGCGACGTTAAAGGTGAATCTCGG
GATCTGATGATCTCTATTGCTCGCATCTTAAATACGGAAGTGGCAATGGA
TGAAGCCATAGACAAAGGTGGTACAGTGATGAGGTTCGCTTCCAAAATAA
GAGGCAAAGGGCATCATCAAGAATAG
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protein sequence of Ggra4899.t1

>Ggra4899.t1 ID=Ggra4899.t1|Name=Ggra4899.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=142bp
MEQLTLMLKASTQITMKYSGMMNDIKRVLFVVTSSIDNVGHLRQEIKNVA
SKRRLIEPRDEEDILFEKSYISIDNMMAYIRGRGESMKSIINSDVKGESR
DLMISIARILNTEVAMDEAIDKGGTVMRFASKIRGKGHHQE*
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mRNA from alignment at tig00000856_pilon:321314..321739-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4899.t1 ID=Ggra4899.t1|Name=Ggra4899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=426bp|location=Sequence derived from alignment at tig00000856_pilon:321314..321739- (Gracilaria gracilis GNS1m male)
ATGGAGCAACTAACTCTCATGCTGAAAGCAAGCACGCAGATCACCATGAA
ATACTCAGGTATGATGAACGATATTAAGCGTGTCTTGTTTGTCGTGACAT
CATCAATAGACAACGTGGGTCATCTTAGACAAGAAATTAAGAACGTTGCT
AGCAAGAGAAGGCTGATAGAGCCAAGAGATGAAGAAGACATTCTGTTTGA
GAAAAGCTACATTTCGATTGACAATATGATGGCGTATATTAGAGGACGAG
GAGAGAGTATGAAAAGCATCATCAACAGCGACGTTAAAGGTGAATCTCGG
GATCTGATGATCTCTATTGCTCGCATCTTAAATACGGAAGTGGCAATGGA
TGAAGCCATAGACAAAGGTGGTACAGTGATGAGGTTCGCTTCCAAAATAA
GAGGCAAAGGGCATCATCAAGAATAG
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Coding sequence (CDS) from alignment at tig00000856_pilon:321314..321739-

>Ggra4899.t1 ID=Ggra4899.t1|Name=Ggra4899.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=426bp|location=Sequence derived from alignment at tig00000856_pilon:321314..321739- (Gracilaria gracilis GNS1m male)
ATGGAGCAACTAACTCTCATGCTGAAAGCAAGCACGCAGATCACCATGAA
ATACTCAGGTATGATGAACGATATTAAGCGTGTCTTGTTTGTCGTGACAT
CATCAATAGACAACGTGGGTCATCTTAGACAAGAAATTAAGAACGTTGCT
AGCAAGAGAAGGCTGATAGAGCCAAGAGATGAAGAAGACATTCTGTTTGA
GAAAAGCTACATTTCGATTGACAATATGATGGCGTATATTAGAGGACGAG
GAGAGAGTATGAAAAGCATCATCAACAGCGACGTTAAAGGTGAATCTCGG
GATCTGATGATCTCTATTGCTCGCATCTTAAATACGGAAGTGGCAATGGA
TGAAGCCATAGACAAAGGTGGTACAGTGATGAGGTTCGCTTCCAAAATAA
GAGGCAAAGGGCATCATCAAGAATAG
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