Ggra4845.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4845.t1
Unique NameGgra4845.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:263668..264231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005708456.1
PFAMsAcetyltransf_1
Max annot lvl2759|Eukaryota
KEGG koko:K20793
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003824,GO:0004402,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006325,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0010485,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022402,GO:0031365,GO:0034085,GO:0034087,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0043967,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048285,GO:0051276,GO:0051604,GO:0052858,GO:0061733,GO:0070601,GO:0071704,GO:0071840,GO:0071962,GO:0098813,GO:0140014,GO:1901564,GO:1903047
Evalue2.79e-53
EggNOG OGsCOG0456@1|root,KOG3138@2759|Eukaryota
EC2.3.1.258
Descriptionpeptide alpha-N-acetyltransferase activity
COG categoryK
BRITEko00000,ko01000,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4845Ggra4845Gracilaria gracilis GNS1m malegenetig00000090_pilon 263668..264231 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4845.t1.stop1Ggra4845.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000090_pilon 263668..263670 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4845.t1.CDS1Ggra4845.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000090_pilon 263668..264231 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4845.t1.exon1Ggra4845.t1.exon1Gracilaria gracilis GNS1m maleexontig00000090_pilon 263668..264231 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4845.t1.start1Ggra4845.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000090_pilon 264229..264231 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4845.t1Ggra4845.t1Gracilaria gracilis GNS1m malepolypeptidetig00000090_pilon 263668..264231 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4845.t1 ID=Ggra4845.t1|Name=Ggra4845.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=188bp
MDDATHAPLPLVWGDVNEKNVNQLEILHTTIFPVKYNDKFYKEVLKAPPG
FVKLAYYNELLVGSVCCRKEPYFENHAALHEQFLAGKTPAEEHVSKEASL
YIMTLGVLAPYRERGIGHRLITHVLHLVESSPVCKDVVDVYLHLQEGNDD
ALRFYKRHGFQVTEHIQGYYKRLDPPDCYIVRKKVNV*
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spliced messenger RNA

>Ggra4845.t1 ID=Ggra4845.t1|Name=Ggra4845.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=564bp|location=Sequence derived from alignment at tig00000090_pilon:263668..264231- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGACGCTACACATGCCCCTCTGCCACTGGTGTGGGGTGACGTGAA
TGAAAAGAACGTGAATCAACTTGAGATTCTTCACACCACCATTTTTCCCG
TCAAGTACAATGACAAGTTCTACAAGGAGGTGTTAAAAGCGCCGCCTGGC
TTTGTCAAGCTTGCATACTATAACGAGTTGCTAGTCGGAAGTGTCTGTTG
TCGAAAAGAACCTTATTTTGAGAATCATGCCGCCCTTCACGAGCAATTCC
TGGCGGGAAAAACACCTGCGGAAGAGCACGTTTCTAAGGAAGCGAGTTTG
TATATAATGACGCTGGGCGTTTTGGCTCCATACCGCGAACGGGGAATCGG
TCATCGCCTCATCACGCATGTTTTGCATCTGGTTGAATCCTCGCCTGTAT
GTAAGGATGTTGTCGACGTTTATCTTCACCTGCAGGAAGGCAACGATGAT
GCGCTGCGGTTCTACAAGCGACATGGTTTTCAGGTTACAGAACATATTCA
AGGCTATTACAAACGACTTGATCCACCAGACTGCTACATTGTCCGAAAGA
AAGTGAACGTGTAA
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protein sequence of Ggra4845.t1

>Ggra4845.t1 ID=Ggra4845.t1|Name=Ggra4845.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MDDATHAPLPLVWGDVNEKNVNQLEILHTTIFPVKYNDKFYKEVLKAPPG
FVKLAYYNELLVGSVCCRKEPYFENHAALHEQFLAGKTPAEEHVSKEASL
YIMTLGVLAPYRERGIGHRLITHVLHLVESSPVCKDVVDVYLHLQEGNDD
ALRFYKRHGFQVTEHIQGYYKRLDPPDCYIVRKKVNV*
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mRNA from alignment at tig00000090_pilon:263668..264231-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4845.t1 ID=Ggra4845.t1|Name=Ggra4845.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=564bp|location=Sequence derived from alignment at tig00000090_pilon:263668..264231- (Gracilaria gracilis GNS1m male)
ATGGACGACGCTACACATGCCCCTCTGCCACTGGTGTGGGGTGACGTGAA
TGAAAAGAACGTGAATCAACTTGAGATTCTTCACACCACCATTTTTCCCG
TCAAGTACAATGACAAGTTCTACAAGGAGGTGTTAAAAGCGCCGCCTGGC
TTTGTCAAGCTTGCATACTATAACGAGTTGCTAGTCGGAAGTGTCTGTTG
TCGAAAAGAACCTTATTTTGAGAATCATGCCGCCCTTCACGAGCAATTCC
TGGCGGGAAAAACACCTGCGGAAGAGCACGTTTCTAAGGAAGCGAGTTTG
TATATAATGACGCTGGGCGTTTTGGCTCCATACCGCGAACGGGGAATCGG
TCATCGCCTCATCACGCATGTTTTGCATCTGGTTGAATCCTCGCCTGTAT
GTAAGGATGTTGTCGACGTTTATCTTCACCTGCAGGAAGGCAACGATGAT
GCGCTGCGGTTCTACAAGCGACATGGTTTTCAGGTTACAGAACATATTCA
AGGCTATTACAAACGACTTGATCCACCAGACTGCTACATTGTCCGAAAGA
AAGTGAACGTGTAA
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Coding sequence (CDS) from alignment at tig00000090_pilon:263668..264231-

>Ggra4845.t1 ID=Ggra4845.t1|Name=Ggra4845.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=564bp|location=Sequence derived from alignment at tig00000090_pilon:263668..264231- (Gracilaria gracilis GNS1m male)
ATGGACGACGCTACACATGCCCCTCTGCCACTGGTGTGGGGTGACGTGAA
TGAAAAGAACGTGAATCAACTTGAGATTCTTCACACCACCATTTTTCCCG
TCAAGTACAATGACAAGTTCTACAAGGAGGTGTTAAAAGCGCCGCCTGGC
TTTGTCAAGCTTGCATACTATAACGAGTTGCTAGTCGGAAGTGTCTGTTG
TCGAAAAGAACCTTATTTTGAGAATCATGCCGCCCTTCACGAGCAATTCC
TGGCGGGAAAAACACCTGCGGAAGAGCACGTTTCTAAGGAAGCGAGTTTG
TATATAATGACGCTGGGCGTTTTGGCTCCATACCGCGAACGGGGAATCGG
TCATCGCCTCATCACGCATGTTTTGCATCTGGTTGAATCCTCGCCTGTAT
GTAAGGATGTTGTCGACGTTTATCTTCACCTGCAGGAAGGCAACGATGAT
GCGCTGCGGTTCTACAAGCGACATGGTTTTCAGGTTACAGAACATATTCA
AGGCTATTACAAACGACTTGATCCACCAGACTGCTACATTGTCCGAAAGA
AAGTGAACGTGTAA
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