Ggra4739.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4739.t1
Unique NameGgra4739.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length175
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:111358..111882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4739Ggra4739Gracilaria gracilis GNS1m malegenetig00000065_pilon 111358..111882 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4739.t1.stop1Ggra4739.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000065_pilon 111358..111360 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4739.t1.CDS1Ggra4739.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000065_pilon 111358..111882 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4739.t1.exon1Ggra4739.t1.exon1Gracilaria gracilis GNS1m maleexontig00000065_pilon 111358..111882 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4739.t1.start1Ggra4739.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000065_pilon 111880..111882 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4739.t1Ggra4739.t1Gracilaria gracilis GNS1m malepolypeptidetig00000065_pilon 111358..111882 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4739.t1 ID=Ggra4739.t1|Name=Ggra4739.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=175bp
MRSCVNIVTKRLRRMEPCGSEWMEVVQINFAQILSGASHWDENEPDSGLC
AHYTYIYTKQWKYNNLHEDPLATAVAIGVIKVVTGCIQPFLQKWASSSLR
GVAKKWLQQGTRVTVETLLEEYAKEFGGLSRSELMALAMSDTKLADIIDR
NNSYTLNKVSGFVENTEMMEVGPG*
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spliced messenger RNA

>Ggra4739.t1 ID=Ggra4739.t1|Name=Ggra4739.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=525bp|location=Sequence derived from alignment at tig00000065_pilon:111358..111882- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGAGTTGTGTAAATATTGTCACGAAAAGGCTGCGGAGGATGGAGCC
ATGTGGTTCAGAATGGATGGAAGTTGTCCAGATAAACTTTGCCCAAATAT
TGAGTGGTGCGAGTCACTGGGATGAGAACGAGCCTGATTCTGGACTTTGT
GCGCACTACACGTACATATATACAAAACAATGGAAGTATAATAATTTACA
TGAAGACCCTTTGGCGACAGCAGTCGCTATTGGTGTGATAAAGGTTGTAA
CTGGTTGCATACAGCCTTTCCTTCAGAAGTGGGCATCCAGTTCACTTCGA
GGGGTTGCAAAGAAGTGGTTACAGCAAGGGACAAGAGTAACTGTGGAAAC
ATTGCTAGAAGAGTATGCAAAGGAATTCGGTGGATTGTCGAGAAGTGAGT
TAATGGCGTTGGCCATGAGTGACACCAAATTGGCCGATATCATCGACAGA
AACAACAGCTACACTCTGAACAAAGTGAGCGGGTTTGTTGAGAACACAGA
GATGATGGAGGTAGGGCCGGGCTGA
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protein sequence of Ggra4739.t1

>Ggra4739.t1 ID=Ggra4739.t1|Name=Ggra4739.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MRSCVNIVTKRLRRMEPCGSEWMEVVQINFAQILSGASHWDENEPDSGLC
AHYTYIYTKQWKYNNLHEDPLATAVAIGVIKVVTGCIQPFLQKWASSSLR
GVAKKWLQQGTRVTVETLLEEYAKEFGGLSRSELMALAMSDTKLADIIDR
NNSYTLNKVSGFVENTEMMEVGPG*
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mRNA from alignment at tig00000065_pilon:111358..111882-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4739.t1 ID=Ggra4739.t1|Name=Ggra4739.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=525bp|location=Sequence derived from alignment at tig00000065_pilon:111358..111882- (Gracilaria gracilis GNS1m male)
ATGAGGAGTTGTGTAAATATTGTCACGAAAAGGCTGCGGAGGATGGAGCC
ATGTGGTTCAGAATGGATGGAAGTTGTCCAGATAAACTTTGCCCAAATAT
TGAGTGGTGCGAGTCACTGGGATGAGAACGAGCCTGATTCTGGACTTTGT
GCGCACTACACGTACATATATACAAAACAATGGAAGTATAATAATTTACA
TGAAGACCCTTTGGCGACAGCAGTCGCTATTGGTGTGATAAAGGTTGTAA
CTGGTTGCATACAGCCTTTCCTTCAGAAGTGGGCATCCAGTTCACTTCGA
GGGGTTGCAAAGAAGTGGTTACAGCAAGGGACAAGAGTAACTGTGGAAAC
ATTGCTAGAAGAGTATGCAAAGGAATTCGGTGGATTGTCGAGAAGTGAGT
TAATGGCGTTGGCCATGAGTGACACCAAATTGGCCGATATCATCGACAGA
AACAACAGCTACACTCTGAACAAAGTGAGCGGGTTTGTTGAGAACACAGA
GATGATGGAGGTAGGGCCGGGCTGA
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Coding sequence (CDS) from alignment at tig00000065_pilon:111358..111882-

>Ggra4739.t1 ID=Ggra4739.t1|Name=Ggra4739.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=525bp|location=Sequence derived from alignment at tig00000065_pilon:111358..111882- (Gracilaria gracilis GNS1m male)
ATGAGGAGTTGTGTAAATATTGTCACGAAAAGGCTGCGGAGGATGGAGCC
ATGTGGTTCAGAATGGATGGAAGTTGTCCAGATAAACTTTGCCCAAATAT
TGAGTGGTGCGAGTCACTGGGATGAGAACGAGCCTGATTCTGGACTTTGT
GCGCACTACACGTACATATATACAAAACAATGGAAGTATAATAATTTACA
TGAAGACCCTTTGGCGACAGCAGTCGCTATTGGTGTGATAAAGGTTGTAA
CTGGTTGCATACAGCCTTTCCTTCAGAAGTGGGCATCCAGTTCACTTCGA
GGGGTTGCAAAGAAGTGGTTACAGCAAGGGACAAGAGTAACTGTGGAAAC
ATTGCTAGAAGAGTATGCAAAGGAATTCGGTGGATTGTCGAGAAGTGAGT
TAATGGCGTTGGCCATGAGTGACACCAAATTGGCCGATATCATCGACAGA
AACAACAGCTACACTCTGAACAAAGTGAGCGGGTTTGTTGAGAACACAGA
GATGATGGAGGTAGGGCCGGGCTGA
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