Ggra4675.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4675.t1
Unique NameGgra4675.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length329
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000124_piloncontigtig00000124_pilon:66312..67298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4675Ggra4675Gracilaria gracilis GNS1m malegenetig00000124_pilon 66312..67298 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4675.t1.stop1Ggra4675.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000124_pilon 66312..66314 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4675.t1.CDS1Ggra4675.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000124_pilon 66312..67298 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4675.t1.exon1Ggra4675.t1.exon1Gracilaria gracilis GNS1m maleexontig00000124_pilon 66312..67298 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4675.t1.start1Ggra4675.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000124_pilon 67296..67298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4675.t1Ggra4675.t1Gracilaria gracilis GNS1m malepolypeptidetig00000124_pilon 66312..67298 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4675.t1 ID=Ggra4675.t1|Name=Ggra4675.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=329bp
MCVDENETIEENQDSLYKPNGIAMKVIANVKILSPALPWVGMVEETVSTP
DANPFVRASCLTILRNLRDDSFEVKEKQSQCFGTQCPLFSDRSSITMEES
NQLFLGMAELFPNELDRLLRATEKNLCDSMIRNFIRSCAHISEEVRGLQI
AVEGLLRSVYNVERRFDERSRRELEECIVETGLKRCKPSAAVDIITNADS
GNPSVIRIACLYGHHQTISFAVHGLLSRSSEIGNEELPAAVGRSIRLLPF
SQRRDILLSMFESIGSLSGTNRREMIDMGVEISAHALMVGGMMPGGRVLL
FASLCSKNRNEQQMTRRLLGFLSSVTED*
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spliced messenger RNA

>Ggra4675.t1 ID=Ggra4675.t1|Name=Ggra4675.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=987bp|location=Sequence derived from alignment at tig00000124_pilon:66312..67298- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGTGTTGATGAGAATGAAACCATTGAGGAGAATCAGGACTCCCTGTA
TAAACCGAACGGCATCGCTATGAAGGTGATAGCAAATGTCAAGATTTTAA
GCCCTGCTTTACCGTGGGTGGGCATGGTTGAAGAAACTGTTTCGACGCCA
GATGCTAACCCTTTTGTAAGAGCCAGTTGCTTGACGATTCTACGCAACCT
TCGTGATGACAGCTTTGAAGTCAAGGAAAAGCAGTCACAATGTTTTGGTA
CGCAATGCCCGTTGTTCAGCGACAGAAGTTCGATTACAATGGAGGAATCA
AACCAGCTCTTCCTGGGAATGGCGGAGTTGTTTCCCAATGAACTAGATCG
ACTGTTGAGGGCCACAGAAAAGAATCTGTGCGATAGCATGATTAGGAACT
TCATCAGAAGCTGTGCCCATATATCAGAGGAAGTACGCGGGCTTCAGATC
GCTGTTGAAGGCCTATTGCGGTCTGTCTACAATGTAGAGCGGCGTTTTGA
TGAGCGTTCAAGAAGGGAACTAGAAGAATGCATTGTTGAGACTGGTTTGA
AGAGATGTAAGCCATCGGCCGCTGTGGACATAATCACGAACGCAGACAGT
GGTAACCCGTCTGTTATCCGTATTGCTTGTCTGTACGGCCATCATCAGAC
TATCAGCTTTGCAGTTCATGGGCTTTTGTCTCGCAGTAGCGAAATAGGGA
ACGAAGAGCTCCCTGCAGCAGTCGGCCGTTCGATACGACTGTTACCCTTC
TCACAACGCAGAGATATCTTGCTGAGCATGTTTGAAAGCATAGGCAGCCT
TTCGGGAACAAACCGGAGGGAAATGATCGATATGGGTGTTGAGATATCAG
CTCACGCACTAATGGTCGGCGGAATGATGCCAGGGGGAAGAGTATTGCTA
TTTGCTTCGCTCTGCTCGAAGAATAGAAATGAGCAGCAAATGACTCGACG
CTTGCTCGGTTTTCTTTCTTCGGTGACGGAGGACTGA
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protein sequence of Ggra4675.t1

>Ggra4675.t1 ID=Ggra4675.t1|Name=Ggra4675.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=329bp
MCVDENETIEENQDSLYKPNGIAMKVIANVKILSPALPWVGMVEETVSTP
DANPFVRASCLTILRNLRDDSFEVKEKQSQCFGTQCPLFSDRSSITMEES
NQLFLGMAELFPNELDRLLRATEKNLCDSMIRNFIRSCAHISEEVRGLQI
AVEGLLRSVYNVERRFDERSRRELEECIVETGLKRCKPSAAVDIITNADS
GNPSVIRIACLYGHHQTISFAVHGLLSRSSEIGNEELPAAVGRSIRLLPF
SQRRDILLSMFESIGSLSGTNRREMIDMGVEISAHALMVGGMMPGGRVLL
FASLCSKNRNEQQMTRRLLGFLSSVTED*
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mRNA from alignment at tig00000124_pilon:66312..67298-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4675.t1 ID=Ggra4675.t1|Name=Ggra4675.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=987bp|location=Sequence derived from alignment at tig00000124_pilon:66312..67298- (Gracilaria gracilis GNS1m male)
ATGTGTGTTGATGAGAATGAAACCATTGAGGAGAATCAGGACTCCCTGTA
TAAACCGAACGGCATCGCTATGAAGGTGATAGCAAATGTCAAGATTTTAA
GCCCTGCTTTACCGTGGGTGGGCATGGTTGAAGAAACTGTTTCGACGCCA
GATGCTAACCCTTTTGTAAGAGCCAGTTGCTTGACGATTCTACGCAACCT
TCGTGATGACAGCTTTGAAGTCAAGGAAAAGCAGTCACAATGTTTTGGTA
CGCAATGCCCGTTGTTCAGCGACAGAAGTTCGATTACAATGGAGGAATCA
AACCAGCTCTTCCTGGGAATGGCGGAGTTGTTTCCCAATGAACTAGATCG
ACTGTTGAGGGCCACAGAAAAGAATCTGTGCGATAGCATGATTAGGAACT
TCATCAGAAGCTGTGCCCATATATCAGAGGAAGTACGCGGGCTTCAGATC
GCTGTTGAAGGCCTATTGCGGTCTGTCTACAATGTAGAGCGGCGTTTTGA
TGAGCGTTCAAGAAGGGAACTAGAAGAATGCATTGTTGAGACTGGTTTGA
AGAGATGTAAGCCATCGGCCGCTGTGGACATAATCACGAACGCAGACAGT
GGTAACCCGTCTGTTATCCGTATTGCTTGTCTGTACGGCCATCATCAGAC
TATCAGCTTTGCAGTTCATGGGCTTTTGTCTCGCAGTAGCGAAATAGGGA
ACGAAGAGCTCCCTGCAGCAGTCGGCCGTTCGATACGACTGTTACCCTTC
TCACAACGCAGAGATATCTTGCTGAGCATGTTTGAAAGCATAGGCAGCCT
TTCGGGAACAAACCGGAGGGAAATGATCGATATGGGTGTTGAGATATCAG
CTCACGCACTAATGGTCGGCGGAATGATGCCAGGGGGAAGAGTATTGCTA
TTTGCTTCGCTCTGCTCGAAGAATAGAAATGAGCAGCAAATGACTCGACG
CTTGCTCGGTTTTCTTTCTTCGGTGACGGAGGACTGA
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Coding sequence (CDS) from alignment at tig00000124_pilon:66312..67298-

>Ggra4675.t1 ID=Ggra4675.t1|Name=Ggra4675.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=987bp|location=Sequence derived from alignment at tig00000124_pilon:66312..67298- (Gracilaria gracilis GNS1m male)
ATGTGTGTTGATGAGAATGAAACCATTGAGGAGAATCAGGACTCCCTGTA
TAAACCGAACGGCATCGCTATGAAGGTGATAGCAAATGTCAAGATTTTAA
GCCCTGCTTTACCGTGGGTGGGCATGGTTGAAGAAACTGTTTCGACGCCA
GATGCTAACCCTTTTGTAAGAGCCAGTTGCTTGACGATTCTACGCAACCT
TCGTGATGACAGCTTTGAAGTCAAGGAAAAGCAGTCACAATGTTTTGGTA
CGCAATGCCCGTTGTTCAGCGACAGAAGTTCGATTACAATGGAGGAATCA
AACCAGCTCTTCCTGGGAATGGCGGAGTTGTTTCCCAATGAACTAGATCG
ACTGTTGAGGGCCACAGAAAAGAATCTGTGCGATAGCATGATTAGGAACT
TCATCAGAAGCTGTGCCCATATATCAGAGGAAGTACGCGGGCTTCAGATC
GCTGTTGAAGGCCTATTGCGGTCTGTCTACAATGTAGAGCGGCGTTTTGA
TGAGCGTTCAAGAAGGGAACTAGAAGAATGCATTGTTGAGACTGGTTTGA
AGAGATGTAAGCCATCGGCCGCTGTGGACATAATCACGAACGCAGACAGT
GGTAACCCGTCTGTTATCCGTATTGCTTGTCTGTACGGCCATCATCAGAC
TATCAGCTTTGCAGTTCATGGGCTTTTGTCTCGCAGTAGCGAAATAGGGA
ACGAAGAGCTCCCTGCAGCAGTCGGCCGTTCGATACGACTGTTACCCTTC
TCACAACGCAGAGATATCTTGCTGAGCATGTTTGAAAGCATAGGCAGCCT
TTCGGGAACAAACCGGAGGGAAATGATCGATATGGGTGTTGAGATATCAG
CTCACGCACTAATGGTCGGCGGAATGATGCCAGGGGGAAGAGTATTGCTA
TTTGCTTCGCTCTGCTCGAAGAATAGAAATGAGCAGCAAATGACTCGACG
CTTGCTCGGTTTTCTTTCTTCGGTGACGGAGGACTGA
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