Ggra4643.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4643.t1
Unique NameGgra4643.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length372
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000061_piloncontigtig00000061_pilon:256206..257321 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4643Ggra4643Gracilaria gracilis GNS1m malegenetig00000061_pilon 256206..257321 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4643.t1.stop1Ggra4643.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000061_pilon 256206..256208 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4643.t1.CDS1Ggra4643.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000061_pilon 256206..257321 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4643.t1.exon1Ggra4643.t1.exon1Gracilaria gracilis GNS1m maleexontig00000061_pilon 256206..257321 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4643.t1.start1Ggra4643.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000061_pilon 257319..257321 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4643.t1Ggra4643.t1Gracilaria gracilis GNS1m malepolypeptidetig00000061_pilon 256206..257321 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4643.t1 ID=Ggra4643.t1|Name=Ggra4643.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=372bp
MVVIPLKSQFVSLIVTSISGASELALLSAAQGWNTFLECRTLARGETINV
RRHRFHTRLLVIFATIVFLFLELFNSFFSDPAIVTRSESRPCISLRPISE
QRATSNISSPSNIIFLECLGTNITTTWQSGGNLFEMEDDDFIVQCEERLY
EFDRLVPEDEPLPESGYVQGCADAPSNETFCVFVYRDGNRVTFTEHVHQQ
NIPAATEPNVNLGVWHTVVHYNVTGLEEEFAERAAQAFVASNVQEVAIRR
QVFSGDGQGDCQFRVDIDATDMSLVLVCALGAVWVVSVALFGASLFFRRQ
NFFDMNDPLHWAQLTGADDDMLGANNPLVATSDLSGRRRIVISMSQKTED
MRFRLFSKLRKGNERNATNTG*
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spliced messenger RNA

>Ggra4643.t1 ID=Ggra4643.t1|Name=Ggra4643.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000061_pilon:256206..257321- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGTCATCCCGTTGAAGTCTCAGTTCGTAAGCTTAATCGTTACCTC
GATCTCCGGCGCTTCCGAATTGGCTTTGTTGTCTGCCGCCCAAGGTTGGA
ACACGTTCCTGGAATGCAGAACTCTTGCGAGAGGAGAAACTATCAATGTC
CGTCGCCACCGTTTTCACACAAGGCTTCTAGTGATATTTGCTACAATCGT
GTTCTTGTTTCTCGAACTTTTTAACTCCTTCTTCAGTGACCCAGCAATCG
TCACCAGGAGTGAGTCCCGTCCTTGTATCTCCCTGCGGCCCATCAGCGAA
CAGAGAGCGACATCCAACATATCCTCACCGTCCAATATCATCTTTCTCGA
ATGTCTTGGTACGAATATAACCACTACGTGGCAGAGTGGTGGTAATCTGT
TTGAAATGGAAGATGACGACTTCATAGTCCAATGTGAAGAGCGACTCTAT
GAGTTTGATCGCTTAGTTCCAGAGGACGAGCCGCTGCCCGAAAGCGGATA
TGTACAAGGATGTGCCGACGCACCAAGCAATGAAACATTTTGTGTGTTCG
TTTACCGGGACGGAAACAGAGTTACGTTCACCGAACATGTGCATCAGCAA
AATATACCGGCTGCCACAGAGCCGAATGTGAATTTGGGCGTGTGGCACAC
TGTTGTGCACTACAACGTCACTGGATTGGAAGAGGAATTTGCAGAGAGAG
CAGCTCAAGCGTTTGTGGCCTCTAACGTCCAAGAGGTCGCAATTCGTAGA
CAAGTATTCAGCGGAGATGGGCAAGGTGACTGTCAGTTTAGAGTTGACAT
TGACGCCACTGATATGAGTTTGGTACTTGTCTGCGCACTTGGAGCCGTTT
GGGTAGTCTCGGTCGCTCTGTTTGGCGCAAGCTTGTTCTTCAGGCGGCAA
AATTTCTTCGACATGAATGATCCTTTGCATTGGGCACAATTGACCGGGGC
TGATGATGATATGTTGGGAGCGAACAACCCTTTGGTTGCAACAAGCGATT
TGAGCGGCAGGAGAAGAATCGTCATATCCATGTCTCAAAAGACGGAGGAC
ATGAGATTTAGGCTCTTCAGCAAACTACGGAAAGGAAATGAGAGGAATGC
AACGAATACGGGTTAA
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protein sequence of Ggra4643.t1

>Ggra4643.t1 ID=Ggra4643.t1|Name=Ggra4643.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=372bp
MVVIPLKSQFVSLIVTSISGASELALLSAAQGWNTFLECRTLARGETINV
RRHRFHTRLLVIFATIVFLFLELFNSFFSDPAIVTRSESRPCISLRPISE
QRATSNISSPSNIIFLECLGTNITTTWQSGGNLFEMEDDDFIVQCEERLY
EFDRLVPEDEPLPESGYVQGCADAPSNETFCVFVYRDGNRVTFTEHVHQQ
NIPAATEPNVNLGVWHTVVHYNVTGLEEEFAERAAQAFVASNVQEVAIRR
QVFSGDGQGDCQFRVDIDATDMSLVLVCALGAVWVVSVALFGASLFFRRQ
NFFDMNDPLHWAQLTGADDDMLGANNPLVATSDLSGRRRIVISMSQKTED
MRFRLFSKLRKGNERNATNTG*
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mRNA from alignment at tig00000061_pilon:256206..257321-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4643.t1 ID=Ggra4643.t1|Name=Ggra4643.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1116bp|location=Sequence derived from alignment at tig00000061_pilon:256206..257321- (Gracilaria gracilis GNS1m male)
ATGGTGGTCATCCCGTTGAAGTCTCAGTTCGTAAGCTTAATCGTTACCTC
GATCTCCGGCGCTTCCGAATTGGCTTTGTTGTCTGCCGCCCAAGGTTGGA
ACACGTTCCTGGAATGCAGAACTCTTGCGAGAGGAGAAACTATCAATGTC
CGTCGCCACCGTTTTCACACAAGGCTTCTAGTGATATTTGCTACAATCGT
GTTCTTGTTTCTCGAACTTTTTAACTCCTTCTTCAGTGACCCAGCAATCG
TCACCAGGAGTGAGTCCCGTCCTTGTATCTCCCTGCGGCCCATCAGCGAA
CAGAGAGCGACATCCAACATATCCTCACCGTCCAATATCATCTTTCTCGA
ATGTCTTGGTACGAATATAACCACTACGTGGCAGAGTGGTGGTAATCTGT
TTGAAATGGAAGATGACGACTTCATAGTCCAATGTGAAGAGCGACTCTAT
GAGTTTGATCGCTTAGTTCCAGAGGACGAGCCGCTGCCCGAAAGCGGATA
TGTACAAGGATGTGCCGACGCACCAAGCAATGAAACATTTTGTGTGTTCG
TTTACCGGGACGGAAACAGAGTTACGTTCACCGAACATGTGCATCAGCAA
AATATACCGGCTGCCACAGAGCCGAATGTGAATTTGGGCGTGTGGCACAC
TGTTGTGCACTACAACGTCACTGGATTGGAAGAGGAATTTGCAGAGAGAG
CAGCTCAAGCGTTTGTGGCCTCTAACGTCCAAGAGGTCGCAATTCGTAGA
CAAGTATTCAGCGGAGATGGGCAAGGTGACTGTCAGTTTAGAGTTGACAT
TGACGCCACTGATATGAGTTTGGTACTTGTCTGCGCACTTGGAGCCGTTT
GGGTAGTCTCGGTCGCTCTGTTTGGCGCAAGCTTGTTCTTCAGGCGGCAA
AATTTCTTCGACATGAATGATCCTTTGCATTGGGCACAATTGACCGGGGC
TGATGATGATATGTTGGGAGCGAACAACCCTTTGGTTGCAACAAGCGATT
TGAGCGGCAGGAGAAGAATCGTCATATCCATGTCTCAAAAGACGGAGGAC
ATGAGATTTAGGCTCTTCAGCAAACTACGGAAAGGAAATGAGAGGAATGC
AACGAATACGGGTTAA
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Coding sequence (CDS) from alignment at tig00000061_pilon:256206..257321-

>Ggra4643.t1 ID=Ggra4643.t1|Name=Ggra4643.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1116bp|location=Sequence derived from alignment at tig00000061_pilon:256206..257321- (Gracilaria gracilis GNS1m male)
ATGGTGGTCATCCCGTTGAAGTCTCAGTTCGTAAGCTTAATCGTTACCTC
GATCTCCGGCGCTTCCGAATTGGCTTTGTTGTCTGCCGCCCAAGGTTGGA
ACACGTTCCTGGAATGCAGAACTCTTGCGAGAGGAGAAACTATCAATGTC
CGTCGCCACCGTTTTCACACAAGGCTTCTAGTGATATTTGCTACAATCGT
GTTCTTGTTTCTCGAACTTTTTAACTCCTTCTTCAGTGACCCAGCAATCG
TCACCAGGAGTGAGTCCCGTCCTTGTATCTCCCTGCGGCCCATCAGCGAA
CAGAGAGCGACATCCAACATATCCTCACCGTCCAATATCATCTTTCTCGA
ATGTCTTGGTACGAATATAACCACTACGTGGCAGAGTGGTGGTAATCTGT
TTGAAATGGAAGATGACGACTTCATAGTCCAATGTGAAGAGCGACTCTAT
GAGTTTGATCGCTTAGTTCCAGAGGACGAGCCGCTGCCCGAAAGCGGATA
TGTACAAGGATGTGCCGACGCACCAAGCAATGAAACATTTTGTGTGTTCG
TTTACCGGGACGGAAACAGAGTTACGTTCACCGAACATGTGCATCAGCAA
AATATACCGGCTGCCACAGAGCCGAATGTGAATTTGGGCGTGTGGCACAC
TGTTGTGCACTACAACGTCACTGGATTGGAAGAGGAATTTGCAGAGAGAG
CAGCTCAAGCGTTTGTGGCCTCTAACGTCCAAGAGGTCGCAATTCGTAGA
CAAGTATTCAGCGGAGATGGGCAAGGTGACTGTCAGTTTAGAGTTGACAT
TGACGCCACTGATATGAGTTTGGTACTTGTCTGCGCACTTGGAGCCGTTT
GGGTAGTCTCGGTCGCTCTGTTTGGCGCAAGCTTGTTCTTCAGGCGGCAA
AATTTCTTCGACATGAATGATCCTTTGCATTGGGCACAATTGACCGGGGC
TGATGATGATATGTTGGGAGCGAACAACCCTTTGGTTGCAACAAGCGATT
TGAGCGGCAGGAGAAGAATCGTCATATCCATGTCTCAAAAGACGGAGGAC
ATGAGATTTAGGCTCTTCAGCAAACTACGGAAAGGAAATGAGAGGAATGC
AACGAATACGGGTTAA
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