Ggra4624.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4624.t1
Unique NameGgra4624.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length157
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:162823..163293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4624Ggra4624Gracilaria gracilis GNS1m malegenetig00000941_pilon 162823..163293 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4624.t1.stop1Ggra4624.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000941_pilon 162823..162825 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4624.t1.CDS1Ggra4624.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000941_pilon 162823..163293 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4624.t1.exon1Ggra4624.t1.exon1Gracilaria gracilis GNS1m maleexontig00000941_pilon 162823..163293 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4624.t1.start1Ggra4624.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000941_pilon 163291..163293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4624.t1Ggra4624.t1Gracilaria gracilis GNS1m malepolypeptidetig00000941_pilon 162823..163293 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4624.t1 ID=Ggra4624.t1|Name=Ggra4624.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=157bp
MGFQESERAENKSLRLLLNPDPETYKLKASEKELLDVWYFLKYPHEISEH
MEWPFSTLDHLAPFLRPHFLSGASQIPPAIVAFLVADIRKYDEERRVQHA
AFCLKSAVIGLDSFWMFVLHGLLVHFTACKKPSPSVDKLYQLVMNNLSGL
DLDSKQ*
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spliced messenger RNA

>Ggra4624.t1 ID=Ggra4624.t1|Name=Ggra4624.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=471bp|location=Sequence derived from alignment at tig00000941_pilon:162823..163293- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTTTCCAAGAGTCTGAAAGAGCCGAGAACAAGTCCCTCCGCCTGCT
TCTCAATCCTGATCCTGAGACTTACAAACTCAAAGCTTCCGAGAAAGAAC
TTCTAGATGTCTGGTATTTCTTGAAGTATCCACACGAAATCTCTGAACAT
ATGGAATGGCCGTTCAGCACGCTTGATCATCTTGCCCCCTTTCTTCGTCC
TCACTTCCTTTCAGGCGCGTCACAAATCCCTCCAGCCATAGTTGCCTTTC
TCGTTGCTGATATTCGAAAGTATGATGAAGAGCGTCGTGTCCAACATGCT
GCGTTTTGTCTCAAGTCTGCTGTGATTGGGTTGGATTCGTTCTGGATGTT
TGTCCTTCATGGCTTGCTGGTGCATTTCACGGCTTGTAAAAAGCCGAGCC
CATCTGTGGACAAATTATACCAGCTTGTCATGAACAACCTGTCTGGTCTA
GATCTGGATTCGAAGCAGTAA
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protein sequence of Ggra4624.t1

>Ggra4624.t1 ID=Ggra4624.t1|Name=Ggra4624.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=157bp
MGFQESERAENKSLRLLLNPDPETYKLKASEKELLDVWYFLKYPHEISEH
MEWPFSTLDHLAPFLRPHFLSGASQIPPAIVAFLVADIRKYDEERRVQHA
AFCLKSAVIGLDSFWMFVLHGLLVHFTACKKPSPSVDKLYQLVMNNLSGL
DLDSKQ*
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mRNA from alignment at tig00000941_pilon:162823..163293-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4624.t1 ID=Ggra4624.t1|Name=Ggra4624.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=471bp|location=Sequence derived from alignment at tig00000941_pilon:162823..163293- (Gracilaria gracilis GNS1m male)
ATGGGTTTCCAAGAGTCTGAAAGAGCCGAGAACAAGTCCCTCCGCCTGCT
TCTCAATCCTGATCCTGAGACTTACAAACTCAAAGCTTCCGAGAAAGAAC
TTCTAGATGTCTGGTATTTCTTGAAGTATCCACACGAAATCTCTGAACAT
ATGGAATGGCCGTTCAGCACGCTTGATCATCTTGCCCCCTTTCTTCGTCC
TCACTTCCTTTCAGGCGCGTCACAAATCCCTCCAGCCATAGTTGCCTTTC
TCGTTGCTGATATTCGAAAGTATGATGAAGAGCGTCGTGTCCAACATGCT
GCGTTTTGTCTCAAGTCTGCTGTGATTGGGTTGGATTCGTTCTGGATGTT
TGTCCTTCATGGCTTGCTGGTGCATTTCACGGCTTGTAAAAAGCCGAGCC
CATCTGTGGACAAATTATACCAGCTTGTCATGAACAACCTGTCTGGTCTA
GATCTGGATTCGAAGCAGTAA
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Coding sequence (CDS) from alignment at tig00000941_pilon:162823..163293-

>Ggra4624.t1 ID=Ggra4624.t1|Name=Ggra4624.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=471bp|location=Sequence derived from alignment at tig00000941_pilon:162823..163293- (Gracilaria gracilis GNS1m male)
ATGGGTTTCCAAGAGTCTGAAAGAGCCGAGAACAAGTCCCTCCGCCTGCT
TCTCAATCCTGATCCTGAGACTTACAAACTCAAAGCTTCCGAGAAAGAAC
TTCTAGATGTCTGGTATTTCTTGAAGTATCCACACGAAATCTCTGAACAT
ATGGAATGGCCGTTCAGCACGCTTGATCATCTTGCCCCCTTTCTTCGTCC
TCACTTCCTTTCAGGCGCGTCACAAATCCCTCCAGCCATAGTTGCCTTTC
TCGTTGCTGATATTCGAAAGTATGATGAAGAGCGTCGTGTCCAACATGCT
GCGTTTTGTCTCAAGTCTGCTGTGATTGGGTTGGATTCGTTCTGGATGTT
TGTCCTTCATGGCTTGCTGGTGCATTTCACGGCTTGTAAAAAGCCGAGCC
CATCTGTGGACAAATTATACCAGCTTGTCATGAACAACCTGTCTGGTCTA
GATCTGGATTCGAAGCAGTAA
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