Ggra4611.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4611.t1
Unique NameGgra4611.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length324
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:129452..130423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005703731.1
Preferred nameSBPase
PFAMsFBPase
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K01100
KEGG ReactionR01845
KEGG Pathwayko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200
KEGG ModuleM00165,M00167
GOsGO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005982,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006073,GO:0006094,GO:0006793,GO:0006796,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009311,GO:0009312,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009941,GO:0009987,GO:0015977,GO:0015979,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019252,GO:0019253,GO:0019318,GO:0019319,GO:0019637,GO:0019685,GO:0030388,GO:0031967,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042132,GO:0042578,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046351,GO:0046364,GO:0048046,GO:0050278,GO:0050308,GO:0050896,GO:0051704,GO:0051707,GO:0071704,GO:0098542,GO:1901135,GO:1901576
Evalue4.25e-96
EggNOG OGsCOG0158@1|root,KOG1458@2759|Eukaryota
EC3.1.3.37
Descriptionfructose 1,6-bisphosphate 1-phosphatase activity
COG categoryG
BiGG ReactioniRC1080.CRv4_Au5_s3_g10858_t1
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4611Ggra4611Gracilaria gracilis GNS1m malegenetig00000941_pilon 129452..130423 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4611.t1.stop1Ggra4611.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000941_pilon 129452..129454 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4611.t1.CDS1Ggra4611.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000941_pilon 129452..130423 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4611.t1.exon1Ggra4611.t1.exon1Gracilaria gracilis GNS1m maleexontig00000941_pilon 129452..130423 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4611.t1.start1Ggra4611.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000941_pilon 130421..130423 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4611.t1Ggra4611.t1Gracilaria gracilis GNS1m malepolypeptidetig00000941_pilon 129452..130423 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4611.t1 ID=Ggra4611.t1|Name=Ggra4611.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=324bp
MADLIEASTAFISSLTPSLSDKLNGFKDPALVSVVTAIADASTKIAHLLR
ESTHAADKAASVNTFGDEQLKIDVQADRIIMKALEKCGAVAVASSEETPI
EKKLNENGSYTVAFDPLDGSSIMASNFSVGSIFGVWPGKKLVGVRGRDMA
VSIAVVYGPQATMFIAARTFGSYVNHFTLFNGAWRHTRDIYEIKEGKLFA
PANLRCAQENEAYNRLIQYYLTNKYTLRYSGGMVPDVTQILMQGNGVFVS
PVSPAAPAKLRLAYEALPMAFLVAAAGGRSSTGESSVLDMHIEECEQRTP
VCLGSPGEVLRYEKLVQATRNGH*
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spliced messenger RNA

>Ggra4611.t1 ID=Ggra4611.t1|Name=Ggra4611.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=972bp|location=Sequence derived from alignment at tig00000941_pilon:129452..130423- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGACCTGATTGAAGCTTCGACGGCGTTCATTTCGTCGCTCACACC
GTCTTTGTCAGACAAGCTTAACGGCTTCAAAGACCCTGCGCTTGTTTCCG
TTGTAACTGCTATCGCTGATGCCTCCACCAAGATAGCCCATTTGTTGCGT
GAGAGCACTCATGCAGCGGATAAGGCTGCTTCCGTCAACACTTTTGGAGA
TGAGCAGCTGAAGATCGATGTCCAGGCCGATAGAATCATCATGAAGGCAT
TGGAGAAGTGTGGTGCTGTTGCTGTGGCGTCCTCTGAGGAAACTCCAATT
GAGAAAAAGCTTAACGAAAATGGCTCCTATACCGTAGCATTCGATCCATT
GGATGGCTCCTCCATTATGGCGTCAAACTTCTCAGTTGGCTCTATCTTTG
GTGTGTGGCCGGGCAAGAAGCTTGTTGGTGTCAGGGGACGTGACATGGCC
GTTTCTATCGCTGTGGTTTACGGACCACAAGCTACCATGTTCATTGCCGC
CCGCACCTTTGGTTCGTATGTCAACCATTTCACTTTGTTCAACGGAGCGT
GGAGACACACAAGAGATATCTACGAAATCAAAGAAGGAAAATTGTTCGCT
CCAGCCAATCTGAGATGCGCTCAAGAGAATGAAGCGTATAATCGTCTCAT
TCAGTATTACCTTACGAACAAGTATACCTTGAGATACTCTGGAGGCATGG
TCCCGGACGTTACACAGATTCTTATGCAGGGCAATGGCGTCTTTGTTTCA
CCTGTCTCACCGGCTGCGCCCGCCAAATTGCGACTGGCATATGAAGCATT
GCCTATGGCATTTCTTGTAGCTGCTGCAGGTGGCCGTTCTAGCACTGGTG
AGTCCAGTGTGCTCGACATGCATATTGAAGAGTGTGAGCAACGCACCCCA
GTCTGTCTCGGCAGTCCCGGTGAAGTTCTTAGGTATGAGAAGCTGGTACA
AGCAACCCGCAACGGGCACTAA
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protein sequence of Ggra4611.t1

>Ggra4611.t1 ID=Ggra4611.t1|Name=Ggra4611.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=324bp
MADLIEASTAFISSLTPSLSDKLNGFKDPALVSVVTAIADASTKIAHLLR
ESTHAADKAASVNTFGDEQLKIDVQADRIIMKALEKCGAVAVASSEETPI
EKKLNENGSYTVAFDPLDGSSIMASNFSVGSIFGVWPGKKLVGVRGRDMA
VSIAVVYGPQATMFIAARTFGSYVNHFTLFNGAWRHTRDIYEIKEGKLFA
PANLRCAQENEAYNRLIQYYLTNKYTLRYSGGMVPDVTQILMQGNGVFVS
PVSPAAPAKLRLAYEALPMAFLVAAAGGRSSTGESSVLDMHIEECEQRTP
VCLGSPGEVLRYEKLVQATRNGH*
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mRNA from alignment at tig00000941_pilon:129452..130423-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4611.t1 ID=Ggra4611.t1|Name=Ggra4611.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=972bp|location=Sequence derived from alignment at tig00000941_pilon:129452..130423- (Gracilaria gracilis GNS1m male)
ATGGCTGACCTGATTGAAGCTTCGACGGCGTTCATTTCGTCGCTCACACC
GTCTTTGTCAGACAAGCTTAACGGCTTCAAAGACCCTGCGCTTGTTTCCG
TTGTAACTGCTATCGCTGATGCCTCCACCAAGATAGCCCATTTGTTGCGT
GAGAGCACTCATGCAGCGGATAAGGCTGCTTCCGTCAACACTTTTGGAGA
TGAGCAGCTGAAGATCGATGTCCAGGCCGATAGAATCATCATGAAGGCAT
TGGAGAAGTGTGGTGCTGTTGCTGTGGCGTCCTCTGAGGAAACTCCAATT
GAGAAAAAGCTTAACGAAAATGGCTCCTATACCGTAGCATTCGATCCATT
GGATGGCTCCTCCATTATGGCGTCAAACTTCTCAGTTGGCTCTATCTTTG
GTGTGTGGCCGGGCAAGAAGCTTGTTGGTGTCAGGGGACGTGACATGGCC
GTTTCTATCGCTGTGGTTTACGGACCACAAGCTACCATGTTCATTGCCGC
CCGCACCTTTGGTTCGTATGTCAACCATTTCACTTTGTTCAACGGAGCGT
GGAGACACACAAGAGATATCTACGAAATCAAAGAAGGAAAATTGTTCGCT
CCAGCCAATCTGAGATGCGCTCAAGAGAATGAAGCGTATAATCGTCTCAT
TCAGTATTACCTTACGAACAAGTATACCTTGAGATACTCTGGAGGCATGG
TCCCGGACGTTACACAGATTCTTATGCAGGGCAATGGCGTCTTTGTTTCA
CCTGTCTCACCGGCTGCGCCCGCCAAATTGCGACTGGCATATGAAGCATT
GCCTATGGCATTTCTTGTAGCTGCTGCAGGTGGCCGTTCTAGCACTGGTG
AGTCCAGTGTGCTCGACATGCATATTGAAGAGTGTGAGCAACGCACCCCA
GTCTGTCTCGGCAGTCCCGGTGAAGTTCTTAGGTATGAGAAGCTGGTACA
AGCAACCCGCAACGGGCACTAA
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Coding sequence (CDS) from alignment at tig00000941_pilon:129452..130423-

>Ggra4611.t1 ID=Ggra4611.t1|Name=Ggra4611.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=972bp|location=Sequence derived from alignment at tig00000941_pilon:129452..130423- (Gracilaria gracilis GNS1m male)
ATGGCTGACCTGATTGAAGCTTCGACGGCGTTCATTTCGTCGCTCACACC
GTCTTTGTCAGACAAGCTTAACGGCTTCAAAGACCCTGCGCTTGTTTCCG
TTGTAACTGCTATCGCTGATGCCTCCACCAAGATAGCCCATTTGTTGCGT
GAGAGCACTCATGCAGCGGATAAGGCTGCTTCCGTCAACACTTTTGGAGA
TGAGCAGCTGAAGATCGATGTCCAGGCCGATAGAATCATCATGAAGGCAT
TGGAGAAGTGTGGTGCTGTTGCTGTGGCGTCCTCTGAGGAAACTCCAATT
GAGAAAAAGCTTAACGAAAATGGCTCCTATACCGTAGCATTCGATCCATT
GGATGGCTCCTCCATTATGGCGTCAAACTTCTCAGTTGGCTCTATCTTTG
GTGTGTGGCCGGGCAAGAAGCTTGTTGGTGTCAGGGGACGTGACATGGCC
GTTTCTATCGCTGTGGTTTACGGACCACAAGCTACCATGTTCATTGCCGC
CCGCACCTTTGGTTCGTATGTCAACCATTTCACTTTGTTCAACGGAGCGT
GGAGACACACAAGAGATATCTACGAAATCAAAGAAGGAAAATTGTTCGCT
CCAGCCAATCTGAGATGCGCTCAAGAGAATGAAGCGTATAATCGTCTCAT
TCAGTATTACCTTACGAACAAGTATACCTTGAGATACTCTGGAGGCATGG
TCCCGGACGTTACACAGATTCTTATGCAGGGCAATGGCGTCTTTGTTTCA
CCTGTCTCACCGGCTGCGCCCGCCAAATTGCGACTGGCATATGAAGCATT
GCCTATGGCATTTCTTGTAGCTGCTGCAGGTGGCCGTTCTAGCACTGGTG
AGTCCAGTGTGCTCGACATGCATATTGAAGAGTGTGAGCAACGCACCCCA
GTCTGTCTCGGCAGTCCCGGTGAAGTTCTTAGGTATGAGAAGCTGGTACA
AGCAACCCGCAACGGGCACTAA
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