Ggra4591.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4591.t1
Unique NameGgra4591.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length166
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:57798..58295 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4591Ggra4591Gracilaria gracilis GNS1m malegenetig00000941_pilon 57798..58295 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4591.t1.stop1Ggra4591.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000941_pilon 57798..57800 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4591.t1.CDS1Ggra4591.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000941_pilon 57798..58295 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4591.t1.exon1Ggra4591.t1.exon1Gracilaria gracilis GNS1m maleexontig00000941_pilon 57798..58295 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4591.t1.start1Ggra4591.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000941_pilon 58293..58295 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4591.t1Ggra4591.t1Gracilaria gracilis GNS1m malepolypeptidetig00000941_pilon 57798..58295 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4591.t1 ID=Ggra4591.t1|Name=Ggra4591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=166bp
MGCTGTLPFSGKNNNQASFGIAARATAATNNCMRNKEYPRAQTVVNKENI
PSKSIASHRLSSNSQNGIEKAVPQHDRVSTDSRNISKRGKGSSMLREKMA
LQFNQMKDHLEQLMVMNKDLEDENERLKKETLRLRQEVRSCIKWLSEMIG
MEEMLNSSSVQRSTL*
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spliced messenger RNA

>Ggra4591.t1 ID=Ggra4591.t1|Name=Ggra4591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=498bp|location=Sequence derived from alignment at tig00000941_pilon:57798..58295- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTTGCACAGGGACACTACCATTCTCTGGAAAGAACAACAACCAGGC
ATCATTCGGAATAGCAGCAAGAGCAACTGCCGCCACGAATAACTGCATGC
GTAACAAAGAGTACCCTCGTGCTCAGACCGTGGTTAACAAGGAGAACATT
CCTTCCAAGAGTATCGCTTCCCACCGACTTTCCTCGAATTCACAAAATGG
TATTGAAAAGGCTGTCCCTCAGCATGATCGTGTCAGCACAGATTCTCGAA
ATATATCAAAGAGAGGAAAGGGTTCTAGCATGCTTAGAGAAAAAATGGCT
CTTCAATTCAATCAAATGAAGGACCATTTGGAACAACTCATGGTGATGAA
CAAAGATCTTGAAGACGAGAATGAACGTCTTAAGAAAGAAACTTTGCGTT
TACGCCAAGAAGTCAGGAGTTGTATAAAGTGGCTATCCGAAATGATTGGG
ATGGAAGAAATGTTGAATAGTTCATCTGTGCAGAGATCTACTCTTTAA
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protein sequence of Ggra4591.t1

>Ggra4591.t1 ID=Ggra4591.t1|Name=Ggra4591.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=166bp
MGCTGTLPFSGKNNNQASFGIAARATAATNNCMRNKEYPRAQTVVNKENI
PSKSIASHRLSSNSQNGIEKAVPQHDRVSTDSRNISKRGKGSSMLREKMA
LQFNQMKDHLEQLMVMNKDLEDENERLKKETLRLRQEVRSCIKWLSEMIG
MEEMLNSSSVQRSTL*
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mRNA from alignment at tig00000941_pilon:57798..58295-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4591.t1 ID=Ggra4591.t1|Name=Ggra4591.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=498bp|location=Sequence derived from alignment at tig00000941_pilon:57798..58295- (Gracilaria gracilis GNS1m male)
ATGGGTTGCACAGGGACACTACCATTCTCTGGAAAGAACAACAACCAGGC
ATCATTCGGAATAGCAGCAAGAGCAACTGCCGCCACGAATAACTGCATGC
GTAACAAAGAGTACCCTCGTGCTCAGACCGTGGTTAACAAGGAGAACATT
CCTTCCAAGAGTATCGCTTCCCACCGACTTTCCTCGAATTCACAAAATGG
TATTGAAAAGGCTGTCCCTCAGCATGATCGTGTCAGCACAGATTCTCGAA
ATATATCAAAGAGAGGAAAGGGTTCTAGCATGCTTAGAGAAAAAATGGCT
CTTCAATTCAATCAAATGAAGGACCATTTGGAACAACTCATGGTGATGAA
CAAAGATCTTGAAGACGAGAATGAACGTCTTAAGAAAGAAACTTTGCGTT
TACGCCAAGAAGTCAGGAGTTGTATAAAGTGGCTATCCGAAATGATTGGG
ATGGAAGAAATGTTGAATAGTTCATCTGTGCAGAGATCTACTCTTTAA
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Coding sequence (CDS) from alignment at tig00000941_pilon:57798..58295-

>Ggra4591.t1 ID=Ggra4591.t1|Name=Ggra4591.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=498bp|location=Sequence derived from alignment at tig00000941_pilon:57798..58295- (Gracilaria gracilis GNS1m male)
ATGGGTTGCACAGGGACACTACCATTCTCTGGAAAGAACAACAACCAGGC
ATCATTCGGAATAGCAGCAAGAGCAACTGCCGCCACGAATAACTGCATGC
GTAACAAAGAGTACCCTCGTGCTCAGACCGTGGTTAACAAGGAGAACATT
CCTTCCAAGAGTATCGCTTCCCACCGACTTTCCTCGAATTCACAAAATGG
TATTGAAAAGGCTGTCCCTCAGCATGATCGTGTCAGCACAGATTCTCGAA
ATATATCAAAGAGAGGAAAGGGTTCTAGCATGCTTAGAGAAAAAATGGCT
CTTCAATTCAATCAAATGAAGGACCATTTGGAACAACTCATGGTGATGAA
CAAAGATCTTGAAGACGAGAATGAACGTCTTAAGAAAGAAACTTTGCGTT
TACGCCAAGAAGTCAGGAGTTGTATAAAGTGGCTATCCGAAATGATTGGG
ATGGAAGAAATGTTGAATAGTTCATCTGTGCAGAGATCTACTCTTTAA
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