Ggra4569.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4569.t1
Unique NameGgra4569.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length382
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:1063177..1064322 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4569Ggra4569Gracilaria gracilis GNS1m malegenetig00000898_pilon 1063177..1064322 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4569.t1.stop1Ggra4569.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000898_pilon 1063177..1063179 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4569.t1.CDS1Ggra4569.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000898_pilon 1063177..1064322 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4569.t1.exon1Ggra4569.t1.exon1Gracilaria gracilis GNS1m maleexontig00000898_pilon 1063177..1064322 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4569.t1.start1Ggra4569.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000898_pilon 1064320..1064322 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4569.t1Ggra4569.t1Gracilaria gracilis GNS1m malepolypeptidetig00000898_pilon 1063177..1064322 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4569.t1 ID=Ggra4569.t1|Name=Ggra4569.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=382bp
MSGKLKSPSTPSTSRAISKARKIGGRRFAAIQRRYRSETRSNAFVLREKR
FAEKGNSQEGTQERCNDGSSSDHMDREGRIRSQKAETRTLCERCSKEAID
SSQRTTNVREEYSISPRIPLIDLTEDAEDVESVSFEHNEMGFGSEEREAA
KSRDWNSGERGNCISAQSGSGNSEENDSLQLLREKEHRDNRPRSNERSTI
VFDVNEQLEARSSWMTSLRNLQRSKPNIFCSKEARLMELPKARKGVSVYE
GINVSASNCLGLRRVLLEFRDAQEFSTSSSERQEKFLTTSISQFLRWCVT
SGVIEKKSVWNEKALFTGIGDREAVKRFAEYFDQRCERRTTRSKVSNLRQ
VGKLALKIVNDDNLKRDISAICQKLEACNEL*
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spliced messenger RNA

>Ggra4569.t1 ID=Ggra4569.t1|Name=Ggra4569.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1146bp|location=Sequence derived from alignment at tig00000898_pilon:1063177..1064322- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTGGAAAGTTGAAGAGTCCATCAACACCATCCACATCGCGAGCTAT
TAGTAAAGCACGCAAGATCGGAGGCCGCAGATTTGCGGCAATTCAACGCC
GTTATCGAAGTGAAACCCGCTCCAACGCTTTCGTGTTACGAGAAAAACGA
TTTGCCGAAAAGGGCAACTCTCAGGAAGGCACACAAGAAAGGTGTAATGA
TGGTTCGAGCTCCGACCACATGGATCGAGAAGGCCGCATTCGTTCTCAGA
AGGCCGAAACTCGGACTCTCTGTGAAAGATGTTCGAAAGAAGCTATTGAT
TCTTCGCAACGAACTACGAATGTAAGAGAAGAGTACAGTATATCCCCGCG
AATTCCGTTAATTGATCTGACGGAAGACGCTGAGGATGTTGAATCGGTTT
CCTTCGAACACAATGAGATGGGCTTTGGTTCAGAAGAGCGTGAAGCTGCG
AAGTCCCGCGACTGGAATTCTGGCGAAAGAGGAAACTGTATTTCTGCACA
GTCTGGATCGGGAAACAGTGAGGAAAATGATTCATTGCAATTGCTTAGAG
AGAAAGAACATCGGGATAACAGGCCGAGAAGTAACGAGAGATCTACCATA
GTGTTCGATGTAAATGAACAACTCGAGGCAAGGAGTTCCTGGATGACATC
GTTGAGAAATCTTCAACGTTCGAAGCCCAATATTTTCTGCAGTAAGGAAG
CACGATTGATGGAATTGCCAAAAGCAAGGAAAGGGGTGTCCGTATATGAA
GGTATCAATGTTTCCGCATCCAATTGTCTCGGTCTCCGTAGAGTTTTGCT
GGAGTTTCGTGACGCTCAGGAGTTTAGTACCAGTTCTTCTGAGCGCCAGG
AAAAATTTCTAACGACAAGCATTTCGCAGTTTCTCAGGTGGTGCGTTACA
AGCGGGGTCATTGAGAAGAAATCTGTCTGGAATGAGAAAGCGTTGTTCAC
TGGAATAGGGGACAGGGAAGCTGTCAAGAGATTTGCGGAATACTTCGATC
AACGTTGTGAGCGCCGAACGACAAGGTCGAAAGTATCAAATTTGCGTCAA
GTTGGGAAGCTAGCCTTGAAGATTGTGAACGACGACAACTTGAAGCGCGA
TATTTCCGCGATATGTCAGAAGCTTGAGGCCTGCAATGAGTTGTGA
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protein sequence of Ggra4569.t1

>Ggra4569.t1 ID=Ggra4569.t1|Name=Ggra4569.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=382bp
MSGKLKSPSTPSTSRAISKARKIGGRRFAAIQRRYRSETRSNAFVLREKR
FAEKGNSQEGTQERCNDGSSSDHMDREGRIRSQKAETRTLCERCSKEAID
SSQRTTNVREEYSISPRIPLIDLTEDAEDVESVSFEHNEMGFGSEEREAA
KSRDWNSGERGNCISAQSGSGNSEENDSLQLLREKEHRDNRPRSNERSTI
VFDVNEQLEARSSWMTSLRNLQRSKPNIFCSKEARLMELPKARKGVSVYE
GINVSASNCLGLRRVLLEFRDAQEFSTSSSERQEKFLTTSISQFLRWCVT
SGVIEKKSVWNEKALFTGIGDREAVKRFAEYFDQRCERRTTRSKVSNLRQ
VGKLALKIVNDDNLKRDISAICQKLEACNEL*
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mRNA from alignment at tig00000898_pilon:1063177..1064322-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4569.t1 ID=Ggra4569.t1|Name=Ggra4569.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1146bp|location=Sequence derived from alignment at tig00000898_pilon:1063177..1064322- (Gracilaria gracilis GNS1m male)
ATGTCTGGAAAGTTGAAGAGTCCATCAACACCATCCACATCGCGAGCTAT
TAGTAAAGCACGCAAGATCGGAGGCCGCAGATTTGCGGCAATTCAACGCC
GTTATCGAAGTGAAACCCGCTCCAACGCTTTCGTGTTACGAGAAAAACGA
TTTGCCGAAAAGGGCAACTCTCAGGAAGGCACACAAGAAAGGTGTAATGA
TGGTTCGAGCTCCGACCACATGGATCGAGAAGGCCGCATTCGTTCTCAGA
AGGCCGAAACTCGGACTCTCTGTGAAAGATGTTCGAAAGAAGCTATTGAT
TCTTCGCAACGAACTACGAATGTAAGAGAAGAGTACAGTATATCCCCGCG
AATTCCGTTAATTGATCTGACGGAAGACGCTGAGGATGTTGAATCGGTTT
CCTTCGAACACAATGAGATGGGCTTTGGTTCAGAAGAGCGTGAAGCTGCG
AAGTCCCGCGACTGGAATTCTGGCGAAAGAGGAAACTGTATTTCTGCACA
GTCTGGATCGGGAAACAGTGAGGAAAATGATTCATTGCAATTGCTTAGAG
AGAAAGAACATCGGGATAACAGGCCGAGAAGTAACGAGAGATCTACCATA
GTGTTCGATGTAAATGAACAACTCGAGGCAAGGAGTTCCTGGATGACATC
GTTGAGAAATCTTCAACGTTCGAAGCCCAATATTTTCTGCAGTAAGGAAG
CACGATTGATGGAATTGCCAAAAGCAAGGAAAGGGGTGTCCGTATATGAA
GGTATCAATGTTTCCGCATCCAATTGTCTCGGTCTCCGTAGAGTTTTGCT
GGAGTTTCGTGACGCTCAGGAGTTTAGTACCAGTTCTTCTGAGCGCCAGG
AAAAATTTCTAACGACAAGCATTTCGCAGTTTCTCAGGTGGTGCGTTACA
AGCGGGGTCATTGAGAAGAAATCTGTCTGGAATGAGAAAGCGTTGTTCAC
TGGAATAGGGGACAGGGAAGCTGTCAAGAGATTTGCGGAATACTTCGATC
AACGTTGTGAGCGCCGAACGACAAGGTCGAAAGTATCAAATTTGCGTCAA
GTTGGGAAGCTAGCCTTGAAGATTGTGAACGACGACAACTTGAAGCGCGA
TATTTCCGCGATATGTCAGAAGCTTGAGGCCTGCAATGAGTTGTGA
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Coding sequence (CDS) from alignment at tig00000898_pilon:1063177..1064322-

>Ggra4569.t1 ID=Ggra4569.t1|Name=Ggra4569.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1146bp|location=Sequence derived from alignment at tig00000898_pilon:1063177..1064322- (Gracilaria gracilis GNS1m male)
ATGTCTGGAAAGTTGAAGAGTCCATCAACACCATCCACATCGCGAGCTAT
TAGTAAAGCACGCAAGATCGGAGGCCGCAGATTTGCGGCAATTCAACGCC
GTTATCGAAGTGAAACCCGCTCCAACGCTTTCGTGTTACGAGAAAAACGA
TTTGCCGAAAAGGGCAACTCTCAGGAAGGCACACAAGAAAGGTGTAATGA
TGGTTCGAGCTCCGACCACATGGATCGAGAAGGCCGCATTCGTTCTCAGA
AGGCCGAAACTCGGACTCTCTGTGAAAGATGTTCGAAAGAAGCTATTGAT
TCTTCGCAACGAACTACGAATGTAAGAGAAGAGTACAGTATATCCCCGCG
AATTCCGTTAATTGATCTGACGGAAGACGCTGAGGATGTTGAATCGGTTT
CCTTCGAACACAATGAGATGGGCTTTGGTTCAGAAGAGCGTGAAGCTGCG
AAGTCCCGCGACTGGAATTCTGGCGAAAGAGGAAACTGTATTTCTGCACA
GTCTGGATCGGGAAACAGTGAGGAAAATGATTCATTGCAATTGCTTAGAG
AGAAAGAACATCGGGATAACAGGCCGAGAAGTAACGAGAGATCTACCATA
GTGTTCGATGTAAATGAACAACTCGAGGCAAGGAGTTCCTGGATGACATC
GTTGAGAAATCTTCAACGTTCGAAGCCCAATATTTTCTGCAGTAAGGAAG
CACGATTGATGGAATTGCCAAAAGCAAGGAAAGGGGTGTCCGTATATGAA
GGTATCAATGTTTCCGCATCCAATTGTCTCGGTCTCCGTAGAGTTTTGCT
GGAGTTTCGTGACGCTCAGGAGTTTAGTACCAGTTCTTCTGAGCGCCAGG
AAAAATTTCTAACGACAAGCATTTCGCAGTTTCTCAGGTGGTGCGTTACA
AGCGGGGTCATTGAGAAGAAATCTGTCTGGAATGAGAAAGCGTTGTTCAC
TGGAATAGGGGACAGGGAAGCTGTCAAGAGATTTGCGGAATACTTCGATC
AACGTTGTGAGCGCCGAACGACAAGGTCGAAAGTATCAAATTTGCGTCAA
GTTGGGAAGCTAGCCTTGAAGATTGTGAACGACGACAACTTGAAGCGCGA
TATTTCCGCGATATGTCAGAAGCTTGAGGCCTGCAATGAGTTGTGA
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