Ggra4431.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4431.t1
Unique NameGgra4431.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:397035..397853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4431Ggra4431Gracilaria gracilis GNS1m malegenetig00000898_pilon 397035..397853 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4431.t1.stop1Ggra4431.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000898_pilon 397035..397037 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4431.t1.CDS1Ggra4431.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000898_pilon 397035..397853 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4431.t1.exon1Ggra4431.t1.exon1Gracilaria gracilis GNS1m maleexontig00000898_pilon 397035..397853 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4431.t1.start1Ggra4431.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000898_pilon 397851..397853 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4431.t1Ggra4431.t1Gracilaria gracilis GNS1m malepolypeptidetig00000898_pilon 397035..397853 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4431.t1 ID=Ggra4431.t1|Name=Ggra4431.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=273bp
MGKAKLTRLSLTQKIRLRHEEVKRWRKRCRVKKIHPNVINEIIRGSARTP
SQAISFINNARYLGFNPANFLPVLCKGVLNRNLQHLLVREAGALLPNTAG
RPVKPNEARDVFGRAAEGRYKICSRPYLPGFKEAAEIAHEALQNVVHKFE
RENRKALDNDLVSLGESVALSAWFDKTTENDQPIRITVMHIGPKEKGHIS
HHKDKYPLWGAAVLCLQEKNHTDSGITLHNGRPYDFAWRLRDGDMLIITP
KLVQSVVITATNKEAYVLIIWF*
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spliced messenger RNA

>Ggra4431.t1 ID=Ggra4431.t1|Name=Ggra4431.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=819bp|location=Sequence derived from alignment at tig00000898_pilon:397035..397853- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGAAAGCGAAGCTCACGCGACTTTCTCTCACACAGAAGATTCGACT
GCGACATGAAGAAGTCAAGCGATGGCGAAAGAGGTGCCGAGTCAAGAAGA
TACATCCCAATGTCATCAATGAAATTATAAGGGGATCGGCACGAACGCCT
TCTCAAGCAATTTCGTTCATTAACAACGCTCGATATCTCGGTTTCAACCC
TGCGAATTTCTTGCCGGTCTTATGTAAGGGCGTACTCAACAGAAACTTGC
AGCACTTGCTAGTTAGAGAAGCAGGGGCTCTATTGCCGAACACGGCCGGC
CGGCCCGTGAAACCGAACGAAGCGAGAGACGTGTTTGGCCGTGCTGCTGA
AGGCAGGTATAAGATTTGTTCTAGACCCTACTTGCCCGGATTTAAAGAAG
CGGCCGAAATTGCCCACGAGGCGTTGCAAAATGTTGTACACAAGTTTGAG
CGCGAAAACCGCAAAGCACTGGACAATGATCTAGTTTCACTCGGAGAATC
TGTCGCATTGAGTGCTTGGTTTGATAAGACAACCGAGAATGACCAACCAA
TACGTATTACCGTCATGCATATTGGCCCTAAGGAGAAGGGTCATATTTCC
CATCACAAAGACAAATACCCGTTATGGGGTGCGGCGGTTTTATGCCTACA
AGAGAAAAATCACACTGACTCGGGCATCACTTTGCACAACGGACGCCCTT
ACGACTTTGCTTGGCGTCTGCGAGATGGTGATATGCTGATCATCACCCCA
AAGTTGGTGCAATCCGTCGTAATAACTGCAACTAACAAAGAAGCGTATGT
ATTGATCATCTGGTTTTGA
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protein sequence of Ggra4431.t1

>Ggra4431.t1 ID=Ggra4431.t1|Name=Ggra4431.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
MGKAKLTRLSLTQKIRLRHEEVKRWRKRCRVKKIHPNVINEIIRGSARTP
SQAISFINNARYLGFNPANFLPVLCKGVLNRNLQHLLVREAGALLPNTAG
RPVKPNEARDVFGRAAEGRYKICSRPYLPGFKEAAEIAHEALQNVVHKFE
RENRKALDNDLVSLGESVALSAWFDKTTENDQPIRITVMHIGPKEKGHIS
HHKDKYPLWGAAVLCLQEKNHTDSGITLHNGRPYDFAWRLRDGDMLIITP
KLVQSVVITATNKEAYVLIIWF*
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mRNA from alignment at tig00000898_pilon:397035..397853-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4431.t1 ID=Ggra4431.t1|Name=Ggra4431.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=819bp|location=Sequence derived from alignment at tig00000898_pilon:397035..397853- (Gracilaria gracilis GNS1m male)
ATGGGGAAAGCGAAGCTCACGCGACTTTCTCTCACACAGAAGATTCGACT
GCGACATGAAGAAGTCAAGCGATGGCGAAAGAGGTGCCGAGTCAAGAAGA
TACATCCCAATGTCATCAATGAAATTATAAGGGGATCGGCACGAACGCCT
TCTCAAGCAATTTCGTTCATTAACAACGCTCGATATCTCGGTTTCAACCC
TGCGAATTTCTTGCCGGTCTTATGTAAGGGCGTACTCAACAGAAACTTGC
AGCACTTGCTAGTTAGAGAAGCAGGGGCTCTATTGCCGAACACGGCCGGC
CGGCCCGTGAAACCGAACGAAGCGAGAGACGTGTTTGGCCGTGCTGCTGA
AGGCAGGTATAAGATTTGTTCTAGACCCTACTTGCCCGGATTTAAAGAAG
CGGCCGAAATTGCCCACGAGGCGTTGCAAAATGTTGTACACAAGTTTGAG
CGCGAAAACCGCAAAGCACTGGACAATGATCTAGTTTCACTCGGAGAATC
TGTCGCATTGAGTGCTTGGTTTGATAAGACAACCGAGAATGACCAACCAA
TACGTATTACCGTCATGCATATTGGCCCTAAGGAGAAGGGTCATATTTCC
CATCACAAAGACAAATACCCGTTATGGGGTGCGGCGGTTTTATGCCTACA
AGAGAAAAATCACACTGACTCGGGCATCACTTTGCACAACGGACGCCCTT
ACGACTTTGCTTGGCGTCTGCGAGATGGTGATATGCTGATCATCACCCCA
AAGTTGGTGCAATCCGTCGTAATAACTGCAACTAACAAAGAAGCGTATGT
ATTGATCATCTGGTTTTGA
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Coding sequence (CDS) from alignment at tig00000898_pilon:397035..397853-

>Ggra4431.t1 ID=Ggra4431.t1|Name=Ggra4431.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=819bp|location=Sequence derived from alignment at tig00000898_pilon:397035..397853- (Gracilaria gracilis GNS1m male)
ATGGGGAAAGCGAAGCTCACGCGACTTTCTCTCACACAGAAGATTCGACT
GCGACATGAAGAAGTCAAGCGATGGCGAAAGAGGTGCCGAGTCAAGAAGA
TACATCCCAATGTCATCAATGAAATTATAAGGGGATCGGCACGAACGCCT
TCTCAAGCAATTTCGTTCATTAACAACGCTCGATATCTCGGTTTCAACCC
TGCGAATTTCTTGCCGGTCTTATGTAAGGGCGTACTCAACAGAAACTTGC
AGCACTTGCTAGTTAGAGAAGCAGGGGCTCTATTGCCGAACACGGCCGGC
CGGCCCGTGAAACCGAACGAAGCGAGAGACGTGTTTGGCCGTGCTGCTGA
AGGCAGGTATAAGATTTGTTCTAGACCCTACTTGCCCGGATTTAAAGAAG
CGGCCGAAATTGCCCACGAGGCGTTGCAAAATGTTGTACACAAGTTTGAG
CGCGAAAACCGCAAAGCACTGGACAATGATCTAGTTTCACTCGGAGAATC
TGTCGCATTGAGTGCTTGGTTTGATAAGACAACCGAGAATGACCAACCAA
TACGTATTACCGTCATGCATATTGGCCCTAAGGAGAAGGGTCATATTTCC
CATCACAAAGACAAATACCCGTTATGGGGTGCGGCGGTTTTATGCCTACA
AGAGAAAAATCACACTGACTCGGGCATCACTTTGCACAACGGACGCCCTT
ACGACTTTGCTTGGCGTCTGCGAGATGGTGATATGCTGATCATCACCCCA
AAGTTGGTGCAATCCGTCGTAATAACTGCAACTAACAAAGAAGCGTATGT
ATTGATCATCTGGTTTTGA
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